GO Enrichment Analysis of Co-expressed Genes with
AT3G22630
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 2 | GO:0046686: response to cadmium ion | 1.72E-06 |
| 3 | GO:0019673: GDP-mannose metabolic process | 7.41E-06 |
| 4 | GO:0051775: response to redox state | 7.41E-06 |
| 5 | GO:0009651: response to salt stress | 1.18E-05 |
| 6 | GO:0015865: purine nucleotide transport | 2.00E-05 |
| 7 | GO:0010372: positive regulation of gibberellin biosynthetic process | 2.00E-05 |
| 8 | GO:0042351: 'de novo' GDP-L-fucose biosynthetic process | 3.67E-05 |
| 9 | GO:0046902: regulation of mitochondrial membrane permeability | 5.65E-05 |
| 10 | GO:0009855: determination of bilateral symmetry | 5.65E-05 |
| 11 | GO:0042273: ribosomal large subunit biogenesis | 7.90E-05 |
| 12 | GO:0033356: UDP-L-arabinose metabolic process | 7.90E-05 |
| 13 | GO:0006096: glycolytic process | 1.44E-04 |
| 14 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.74E-04 |
| 15 | GO:0080186: developmental vegetative growth | 1.88E-04 |
| 16 | GO:0071669: plant-type cell wall organization or biogenesis | 1.88E-04 |
| 17 | GO:0006402: mRNA catabolic process | 2.20E-04 |
| 18 | GO:0098656: anion transmembrane transport | 2.85E-04 |
| 19 | GO:0006820: anion transport | 4.26E-04 |
| 20 | GO:0006094: gluconeogenesis | 4.64E-04 |
| 21 | GO:0034605: cellular response to heat | 5.02E-04 |
| 22 | GO:0009306: protein secretion | 8.32E-04 |
| 23 | GO:0010501: RNA secondary structure unwinding | 9.19E-04 |
| 24 | GO:0010197: polar nucleus fusion | 9.64E-04 |
| 25 | GO:0009960: endosperm development | 9.64E-04 |
| 26 | GO:0010154: fruit development | 9.64E-04 |
| 27 | GO:0080156: mitochondrial mRNA modification | 1.10E-03 |
| 28 | GO:0031047: gene silencing by RNA | 1.15E-03 |
| 29 | GO:0009555: pollen development | 1.45E-03 |
| 30 | GO:0030244: cellulose biosynthetic process | 1.67E-03 |
| 31 | GO:0009832: plant-type cell wall biogenesis | 1.72E-03 |
| 32 | GO:0010043: response to zinc ion | 1.84E-03 |
| 33 | GO:0042542: response to hydrogen peroxide | 2.25E-03 |
| 34 | GO:0009744: response to sucrose | 2.31E-03 |
| 35 | GO:0042546: cell wall biogenesis | 2.38E-03 |
| 36 | GO:0009846: pollen germination | 2.70E-03 |
| 37 | GO:0006364: rRNA processing | 2.82E-03 |
| 38 | GO:0071555: cell wall organization | 2.90E-03 |
| 39 | GO:0048316: seed development | 3.23E-03 |
| 40 | GO:0009553: embryo sac development | 3.51E-03 |
| 41 | GO:0009409: response to cold | 3.91E-03 |
| 42 | GO:0006413: translational initiation | 4.96E-03 |
| 43 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 5.63E-03 |
| 44 | GO:0009617: response to bacterium | 5.88E-03 |
| 45 | GO:0009826: unidimensional cell growth | 6.86E-03 |
| 46 | GO:0009408: response to heat | 1.07E-02 |
| 47 | GO:0006397: mRNA processing | 1.11E-02 |
| 48 | GO:0008152: metabolic process | 1.15E-02 |
| 49 | GO:0055085: transmembrane transport | 1.91E-02 |
| 50 | GO:0009414: response to water deprivation | 2.62E-02 |
| 51 | GO:0006979: response to oxidative stress | 2.68E-02 |
| 52 | GO:0015031: protein transport | 3.17E-02 |
| 53 | GO:0006810: transport | 3.51E-02 |
| 54 | GO:0005975: carbohydrate metabolic process | 3.59E-02 |
| 55 | GO:0009793: embryo development ending in seed dormancy | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004298: threonine-type endopeptidase activity | 3.77E-08 |
| 2 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 7.41E-06 |
| 3 | GO:0008446: GDP-mannose 4,6-dehydratase activity | 7.41E-06 |
| 4 | GO:0052691: UDP-arabinopyranose mutase activity | 2.00E-05 |
| 5 | GO:0008233: peptidase activity | 2.53E-05 |
| 6 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 5.65E-05 |
| 7 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 5.65E-05 |
| 8 | GO:0016866: intramolecular transferase activity | 7.90E-05 |
| 9 | GO:0005471: ATP:ADP antiporter activity | 1.04E-04 |
| 10 | GO:0015288: porin activity | 2.20E-04 |
| 11 | GO:0008308: voltage-gated anion channel activity | 2.52E-04 |
| 12 | GO:0004190: aspartic-type endopeptidase activity | 5.40E-04 |
| 13 | GO:0004540: ribonuclease activity | 7.02E-04 |
| 14 | GO:0016760: cellulose synthase (UDP-forming) activity | 7.88E-04 |
| 15 | GO:0004518: nuclease activity | 1.15E-03 |
| 16 | GO:0000166: nucleotide binding | 1.45E-03 |
| 17 | GO:0004004: ATP-dependent RNA helicase activity | 1.56E-03 |
| 18 | GO:0005507: copper ion binding | 2.05E-03 |
| 19 | GO:0050661: NADP binding | 2.13E-03 |
| 20 | GO:0005525: GTP binding | 2.36E-03 |
| 21 | GO:0051287: NAD binding | 2.63E-03 |
| 22 | GO:0004650: polygalacturonase activity | 3.37E-03 |
| 23 | GO:0016746: transferase activity, transferring acyl groups | 3.66E-03 |
| 24 | GO:0008026: ATP-dependent helicase activity | 3.73E-03 |
| 25 | GO:0004386: helicase activity | 3.81E-03 |
| 26 | GO:0003729: mRNA binding | 4.29E-03 |
| 27 | GO:0016829: lyase activity | 4.41E-03 |
| 28 | GO:0003743: translation initiation factor activity | 5.80E-03 |
| 29 | GO:0005515: protein binding | 1.04E-02 |
| 30 | GO:0003924: GTPase activity | 1.07E-02 |
| 31 | GO:0003676: nucleic acid binding | 1.19E-02 |
| 32 | GO:0003723: RNA binding | 2.26E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.83E-09 |
| 3 | GO:0005839: proteasome core complex | 3.77E-08 |
| 4 | GO:0005774: vacuolar membrane | 5.38E-07 |
| 5 | GO:0000502: proteasome complex | 1.88E-06 |
| 6 | GO:0005740: mitochondrial envelope | 2.35E-06 |
| 7 | GO:0016442: RISC complex | 7.41E-06 |
| 8 | GO:0000138: Golgi trans cisterna | 7.41E-06 |
| 9 | GO:0045254: pyruvate dehydrogenase complex | 2.00E-05 |
| 10 | GO:0005829: cytosol | 2.05E-05 |
| 11 | GO:0030660: Golgi-associated vesicle membrane | 7.90E-05 |
| 12 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 7.90E-05 |
| 13 | GO:0022626: cytosolic ribosome | 1.06E-04 |
| 14 | GO:0032588: trans-Golgi network membrane | 1.30E-04 |
| 15 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 2.20E-04 |
| 16 | GO:0046930: pore complex | 2.52E-04 |
| 17 | GO:0010494: cytoplasmic stress granule | 2.85E-04 |
| 18 | GO:0031901: early endosome membrane | 2.85E-04 |
| 19 | GO:0048471: perinuclear region of cytoplasm | 3.90E-04 |
| 20 | GO:0005765: lysosomal membrane | 3.90E-04 |
| 21 | GO:0005852: eukaryotic translation initiation factor 3 complex | 3.90E-04 |
| 22 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 5.19E-04 |
| 23 | GO:0005795: Golgi stack | 5.40E-04 |
| 24 | GO:0043234: protein complex | 5.80E-04 |
| 25 | GO:0005741: mitochondrial outer membrane | 7.02E-04 |
| 26 | GO:0016592: mediator complex | 1.15E-03 |
| 27 | GO:0000932: P-body | 1.40E-03 |
| 28 | GO:0005618: cell wall | 1.67E-03 |
| 29 | GO:0005773: vacuole | 2.41E-03 |
| 30 | GO:0005635: nuclear envelope | 2.96E-03 |
| 31 | GO:0005834: heterotrimeric G-protein complex | 3.30E-03 |
| 32 | GO:0005759: mitochondrial matrix | 4.88E-03 |
| 33 | GO:0005737: cytoplasm | 9.37E-03 |
| 34 | GO:0005743: mitochondrial inner membrane | 1.02E-02 |
| 35 | GO:0048046: apoplast | 1.05E-02 |
| 36 | GO:0009941: chloroplast envelope | 1.36E-02 |
| 37 | GO:0005886: plasma membrane | 1.71E-02 |
| 38 | GO:0005783: endoplasmic reticulum | 2.02E-02 |
| 39 | GO:0009507: chloroplast | 2.51E-02 |
| 40 | GO:0009536: plastid | 3.08E-02 |
| 41 | GO:0005789: endoplasmic reticulum membrane | 3.61E-02 |
| 42 | GO:0005730: nucleolus | 3.88E-02 |
| 43 | GO:0005739: mitochondrion | 4.88E-02 |