Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G22160

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
2GO:0032780: negative regulation of ATPase activity0.00E+00
3GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
4GO:0006468: protein phosphorylation1.37E-07
5GO:0010200: response to chitin6.06E-07
6GO:0060548: negative regulation of cell death6.41E-07
7GO:0010363: regulation of plant-type hypersensitive response7.62E-05
8GO:0007166: cell surface receptor signaling pathway8.78E-05
9GO:0006952: defense response2.50E-04
10GO:0051707: response to other organism3.27E-04
11GO:0006805: xenobiotic metabolic process3.50E-04
12GO:0051245: negative regulation of cellular defense response3.50E-04
13GO:0006481: C-terminal protein methylation3.50E-04
14GO:0010941: regulation of cell death3.50E-04
15GO:0009270: response to humidity3.50E-04
16GO:0034214: protein hexamerization3.50E-04
17GO:0060862: negative regulation of floral organ abscission3.50E-04
18GO:0016559: peroxisome fission3.80E-04
19GO:0043562: cellular response to nitrogen levels4.65E-04
20GO:0009738: abscisic acid-activated signaling pathway5.21E-04
21GO:0010112: regulation of systemic acquired resistance5.58E-04
22GO:0008202: steroid metabolic process6.60E-04
23GO:0097054: L-glutamate biosynthetic process7.62E-04
24GO:0031648: protein destabilization7.62E-04
25GO:0006212: uracil catabolic process7.62E-04
26GO:0019374: galactolipid metabolic process7.62E-04
27GO:0007584: response to nutrient7.62E-04
28GO:0019483: beta-alanine biosynthetic process7.62E-04
29GO:0015865: purine nucleotide transport7.62E-04
30GO:1902000: homogentisate catabolic process7.62E-04
31GO:0031349: positive regulation of defense response7.62E-04
32GO:0008535: respiratory chain complex IV assembly7.62E-04
33GO:0019725: cellular homeostasis7.62E-04
34GO:0051252: regulation of RNA metabolic process7.62E-04
35GO:0019441: tryptophan catabolic process to kynurenine7.62E-04
36GO:0009308: amine metabolic process7.62E-04
37GO:0043069: negative regulation of programmed cell death7.69E-04
38GO:0009816: defense response to bacterium, incompatible interaction8.91E-04
39GO:0042128: nitrate assimilation9.52E-04
40GO:0015706: nitrate transport1.01E-03
41GO:0045793: positive regulation of cell size1.23E-03
42GO:0010186: positive regulation of cellular defense response1.23E-03
43GO:0009072: aromatic amino acid family metabolic process1.23E-03
44GO:1900140: regulation of seedling development1.23E-03
45GO:0010359: regulation of anion channel activity1.23E-03
46GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.23E-03
47GO:0061158: 3'-UTR-mediated mRNA destabilization1.23E-03
48GO:0080055: low-affinity nitrate transport1.23E-03
49GO:0010053: root epidermal cell differentiation1.44E-03
50GO:0046777: protein autophosphorylation1.47E-03
51GO:0001676: long-chain fatty acid metabolic process1.78E-03
52GO:0048194: Golgi vesicle budding1.78E-03
53GO:2001289: lipid X metabolic process1.78E-03
54GO:0070301: cellular response to hydrogen peroxide1.78E-03
55GO:0046902: regulation of mitochondrial membrane permeability1.78E-03
56GO:0006537: glutamate biosynthetic process1.78E-03
57GO:0006612: protein targeting to membrane1.78E-03
58GO:0006809: nitric oxide biosynthetic process1.78E-03
59GO:0009399: nitrogen fixation1.78E-03
60GO:0006886: intracellular protein transport1.89E-03
61GO:0031348: negative regulation of defense response2.36E-03
62GO:0009814: defense response, incompatible interaction2.36E-03
63GO:0006542: glutamine biosynthetic process2.38E-03
64GO:0019676: ammonia assimilation cycle2.38E-03
65GO:0046345: abscisic acid catabolic process2.38E-03
66GO:0010107: potassium ion import2.38E-03
67GO:0042991: transcription factor import into nucleus2.38E-03
68GO:0010508: positive regulation of autophagy2.38E-03
69GO:0010188: response to microbial phytotoxin2.38E-03
70GO:0080142: regulation of salicylic acid biosynthetic process2.38E-03
71GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.44E-03
72GO:0042742: defense response to bacterium2.64E-03
73GO:0009617: response to bacterium2.70E-03
74GO:0018344: protein geranylgeranylation3.05E-03
75GO:0030308: negative regulation of cell growth3.05E-03
76GO:0009697: salicylic acid biosynthetic process3.05E-03
77GO:0030041: actin filament polymerization3.05E-03
78GO:0051603: proteolysis involved in cellular protein catabolic process3.29E-03
79GO:0010942: positive regulation of cell death3.76E-03
80GO:0006751: glutathione catabolic process3.76E-03
81GO:0070814: hydrogen sulfide biosynthetic process3.76E-03
82GO:1902456: regulation of stomatal opening3.76E-03
83GO:1900425: negative regulation of defense response to bacterium3.76E-03
84GO:0035435: phosphate ion transmembrane transport3.76E-03
85GO:0002238: response to molecule of fungal origin3.76E-03
86GO:0061025: membrane fusion3.79E-03
87GO:0009626: plant-type hypersensitive response4.23E-03
88GO:0010555: response to mannitol4.54E-03
89GO:2000067: regulation of root morphogenesis4.54E-03
90GO:0000911: cytokinesis by cell plate formation4.54E-03
91GO:0009612: response to mechanical stimulus4.54E-03
92GO:0009094: L-phenylalanine biosynthetic process4.54E-03
93GO:0050790: regulation of catalytic activity5.36E-03
94GO:0010044: response to aluminum ion5.36E-03
95GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway5.36E-03
96GO:0010161: red light signaling pathway5.36E-03
97GO:0006955: immune response5.36E-03
98GO:0043090: amino acid import5.36E-03
99GO:0070370: cellular heat acclimation5.36E-03
100GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway5.86E-03
101GO:0006644: phospholipid metabolic process6.22E-03
102GO:0009819: drought recovery6.22E-03
103GO:0043068: positive regulation of programmed cell death6.22E-03
104GO:0006605: protein targeting6.22E-03
105GO:1900150: regulation of defense response to fungus6.22E-03
106GO:0006002: fructose 6-phosphate metabolic process7.14E-03
107GO:0006075: (1->3)-beta-D-glucan biosynthetic process7.14E-03
108GO:0007186: G-protein coupled receptor signaling pathway7.14E-03
109GO:0006367: transcription initiation from RNA polymerase II promoter7.14E-03
110GO:0010120: camalexin biosynthetic process7.14E-03
111GO:0007338: single fertilization8.10E-03
112GO:0046685: response to arsenic-containing substance8.10E-03
113GO:0009821: alkaloid biosynthetic process8.10E-03
114GO:0051865: protein autoubiquitination8.10E-03
115GO:0019538: protein metabolic process1.01E-02
116GO:0000103: sulfate assimilation1.01E-02
117GO:0030148: sphingolipid biosynthetic process1.12E-02
118GO:0009750: response to fructose1.12E-02
119GO:0008152: metabolic process1.17E-02
120GO:0006470: protein dephosphorylation1.18E-02
121GO:0000266: mitochondrial fission1.24E-02
122GO:0012501: programmed cell death1.24E-02
123GO:0006631: fatty acid metabolic process1.24E-02
124GO:0010105: negative regulation of ethylene-activated signaling pathway1.24E-02
125GO:0015031: protein transport1.29E-02
126GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.35E-02
127GO:0006807: nitrogen compound metabolic process1.35E-02
128GO:0009266: response to temperature stimulus1.48E-02
129GO:0034605: cellular response to heat1.48E-02
130GO:0002237: response to molecule of bacterial origin1.48E-02
131GO:0070588: calcium ion transmembrane transport1.60E-02
132GO:0007031: peroxisome organization1.60E-02
133GO:0042343: indole glucosinolate metabolic process1.60E-02
134GO:0010167: response to nitrate1.60E-02
135GO:0034976: response to endoplasmic reticulum stress1.73E-02
136GO:0009809: lignin biosynthetic process1.83E-02
137GO:0009863: salicylic acid mediated signaling pathway1.86E-02
138GO:0006970: response to osmotic stress1.90E-02
139GO:0016575: histone deacetylation2.00E-02
140GO:0006874: cellular calcium ion homeostasis2.00E-02
141GO:0009723: response to ethylene2.08E-02
142GO:0098542: defense response to other organism2.13E-02
143GO:0048278: vesicle docking2.13E-02
144GO:0007005: mitochondrion organization2.28E-02
145GO:0071456: cellular response to hypoxia2.28E-02
146GO:0009620: response to fungus2.38E-02
147GO:0016192: vesicle-mediated transport2.42E-02
148GO:0071215: cellular response to abscisic acid stimulus2.42E-02
149GO:0010091: trichome branching2.57E-02
150GO:0009306: protein secretion2.57E-02
151GO:0035556: intracellular signal transduction2.58E-02
152GO:0018105: peptidyl-serine phosphorylation2.68E-02
153GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.72E-02
154GO:0042147: retrograde transport, endosome to Golgi2.72E-02
155GO:0010118: stomatal movement2.88E-02
156GO:0042631: cellular response to water deprivation2.88E-02
157GO:0042391: regulation of membrane potential2.88E-02
158GO:0006508: proteolysis2.88E-02
159GO:0008360: regulation of cell shape3.04E-02
160GO:0006662: glycerol ether metabolic process3.04E-02
161GO:0006623: protein targeting to vacuole3.36E-02
162GO:0048825: cotyledon development3.36E-02
163GO:0009749: response to glucose3.36E-02
164GO:0009737: response to abscisic acid3.42E-02
165GO:0000302: response to reactive oxygen species3.53E-02
166GO:0010193: response to ozone3.53E-02
167GO:0016032: viral process3.70E-02
168GO:0009567: double fertilization forming a zygote and endosperm4.04E-02
169GO:0006464: cellular protein modification process4.04E-02
170GO:0006904: vesicle docking involved in exocytosis4.22E-02
171GO:0071805: potassium ion transmembrane transport4.22E-02
172GO:0040008: regulation of growth4.28E-02
173GO:0051607: defense response to virus4.40E-02
174GO:0000910: cytokinesis4.40E-02
175GO:0010150: leaf senescence4.48E-02
176GO:0009615: response to virus4.58E-02
177GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.77E-02
178GO:0006906: vesicle fusion4.95E-02
RankGO TermAdjusted P value
1GO:0042030: ATPase inhibitor activity0.00E+00
2GO:0016504: peptidase activator activity0.00E+00
3GO:0016034: maleylacetoacetate isomerase activity0.00E+00
4GO:0003837: beta-ureidopropionase activity0.00E+00
5GO:0070577: lysine-acetylated histone binding0.00E+00
6GO:0015930: glutamate synthase activity0.00E+00
7GO:0005524: ATP binding1.18E-07
8GO:0004713: protein tyrosine kinase activity8.52E-07
9GO:0004674: protein serine/threonine kinase activity4.72E-05
10GO:0016301: kinase activity1.10E-04
11GO:0102391: decanoate--CoA ligase activity2.33E-04
12GO:0004012: phospholipid-translocating ATPase activity2.33E-04
13GO:0004467: long-chain fatty acid-CoA ligase activity3.02E-04
14GO:0016041: glutamate synthase (ferredoxin) activity3.50E-04
15GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity3.50E-04
16GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity3.50E-04
17GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity3.50E-04
18GO:0052595: aliphatic-amine oxidase activity3.50E-04
19GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity3.50E-04
20GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity3.50E-04
21GO:0004714: transmembrane receptor protein tyrosine kinase activity3.80E-04
22GO:0052747: sinapyl alcohol dehydrogenase activity3.80E-04
23GO:0008142: oxysterol binding4.65E-04
24GO:0008428: ribonuclease inhibitor activity7.62E-04
25GO:0032934: sterol binding7.62E-04
26GO:0045140: inositol phosphoceramide synthase activity7.62E-04
27GO:0004061: arylformamidase activity7.62E-04
28GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity7.62E-04
29GO:0045551: cinnamyl-alcohol dehydrogenase activity1.01E-03
30GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.14E-03
31GO:0016805: dipeptidase activity1.23E-03
32GO:0052692: raffinose alpha-galactosidase activity1.23E-03
33GO:0001664: G-protein coupled receptor binding1.23E-03
34GO:0080054: low-affinity nitrate transmembrane transporter activity1.23E-03
35GO:0003840: gamma-glutamyltransferase activity1.23E-03
36GO:0036374: glutathione hydrolase activity1.23E-03
37GO:0004557: alpha-galactosidase activity1.23E-03
38GO:0031683: G-protein beta/gamma-subunit complex binding1.23E-03
39GO:0004663: Rab geranylgeranyltransferase activity1.23E-03
40GO:0004781: sulfate adenylyltransferase (ATP) activity1.23E-03
41GO:0005515: protein binding1.30E-03
42GO:0061630: ubiquitin protein ligase activity1.43E-03
43GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.78E-03
44GO:0010178: IAA-amino acid conjugate hydrolase activity1.78E-03
45GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.85E-03
46GO:0033612: receptor serine/threonine kinase binding2.16E-03
47GO:0004301: epoxide hydrolase activity2.38E-03
48GO:0047769: arogenate dehydratase activity2.38E-03
49GO:0004664: prephenate dehydratase activity2.38E-03
50GO:0070628: proteasome binding2.38E-03
51GO:0051538: 3 iron, 4 sulfur cluster binding3.05E-03
52GO:0005471: ATP:ADP antiporter activity3.05E-03
53GO:0004356: glutamate-ammonia ligase activity3.05E-03
54GO:0010294: abscisic acid glucosyltransferase activity3.05E-03
55GO:0008948: oxaloacetate decarboxylase activity3.05E-03
56GO:0005496: steroid binding3.05E-03
57GO:0031593: polyubiquitin binding3.76E-03
58GO:0047714: galactolipase activity3.76E-03
59GO:0008113: peptide-methionine (S)-S-oxide reductase activity4.54E-03
60GO:0004197: cysteine-type endopeptidase activity4.65E-03
61GO:0008235: metalloexopeptidase activity5.36E-03
62GO:0102425: myricetin 3-O-glucosyltransferase activity5.36E-03
63GO:0102360: daphnetin 3-O-glucosyltransferase activity5.36E-03
64GO:0003872: 6-phosphofructokinase activity5.36E-03
65GO:0008320: protein transmembrane transporter activity5.36E-03
66GO:0004620: phospholipase activity5.36E-03
67GO:0016887: ATPase activity5.60E-03
68GO:0016597: amino acid binding5.95E-03
69GO:0047893: flavonol 3-O-glucosyltransferase activity6.22E-03
70GO:0005544: calcium-dependent phospholipid binding6.22E-03
71GO:0005509: calcium ion binding6.94E-03
72GO:0009931: calcium-dependent protein serine/threonine kinase activity7.04E-03
73GO:0003843: 1,3-beta-D-glucan synthase activity7.14E-03
74GO:0005267: potassium channel activity7.14E-03
75GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)7.14E-03
76GO:0008970: phosphatidylcholine 1-acylhydrolase activity7.14E-03
77GO:0004683: calmodulin-dependent protein kinase activity7.43E-03
78GO:0071949: FAD binding8.10E-03
79GO:0008565: protein transporter activity8.26E-03
80GO:0047617: acyl-CoA hydrolase activity9.10E-03
81GO:0016844: strictosidine synthase activity9.10E-03
82GO:0015112: nitrate transmembrane transporter activity9.10E-03
83GO:0045309: protein phosphorylated amino acid binding9.10E-03
84GO:0004177: aminopeptidase activity1.12E-02
85GO:0005543: phospholipid binding1.12E-02
86GO:0019904: protein domain specific binding1.12E-02
87GO:0008794: arsenate reductase (glutaredoxin) activity1.12E-02
88GO:0004712: protein serine/threonine/tyrosine kinase activity1.14E-02
89GO:0008194: UDP-glycosyltransferase activity1.14E-02
90GO:0004364: glutathione transferase activity1.30E-02
91GO:0005262: calcium channel activity1.35E-02
92GO:0005388: calcium-transporting ATPase activity1.35E-02
93GO:0005484: SNAP receptor activity1.35E-02
94GO:0005315: inorganic phosphate transmembrane transporter activity1.35E-02
95GO:0005516: calmodulin binding1.44E-02
96GO:0031624: ubiquitin conjugating enzyme binding1.48E-02
97GO:0008131: primary amine oxidase activity1.48E-02
98GO:0015293: symporter activity1.52E-02
99GO:0004190: aspartic-type endopeptidase activity1.60E-02
100GO:0030552: cAMP binding1.60E-02
101GO:0030553: cGMP binding1.60E-02
102GO:0004970: ionotropic glutamate receptor activity1.60E-02
103GO:0005217: intracellular ligand-gated ion channel activity1.60E-02
104GO:0004672: protein kinase activity1.71E-02
105GO:0003954: NADH dehydrogenase activity1.86E-02
106GO:0004407: histone deacetylase activity1.86E-02
107GO:0043424: protein histidine kinase binding2.00E-02
108GO:0005216: ion channel activity2.00E-02
109GO:0015079: potassium ion transmembrane transporter activity2.00E-02
110GO:0008234: cysteine-type peptidase activity2.02E-02
111GO:0035251: UDP-glucosyltransferase activity2.13E-02
112GO:0004298: threonine-type endopeptidase activity2.13E-02
113GO:0080043: quercetin 3-O-glucosyltransferase activity2.38E-02
114GO:0080044: quercetin 7-O-glucosyltransferase activity2.38E-02
115GO:0003727: single-stranded RNA binding2.57E-02
116GO:0015035: protein disulfide oxidoreductase activity2.68E-02
117GO:0047134: protein-disulfide reductase activity2.72E-02
118GO:0005249: voltage-gated potassium channel activity2.88E-02
119GO:0030551: cyclic nucleotide binding2.88E-02
120GO:0042803: protein homodimerization activity3.01E-02
121GO:0004871: signal transducer activity3.01E-02
122GO:0030276: clathrin binding3.04E-02
123GO:0001085: RNA polymerase II transcription factor binding3.04E-02
124GO:0004722: protein serine/threonine phosphatase activity3.19E-02
125GO:0004791: thioredoxin-disulfide reductase activity3.20E-02
126GO:0010181: FMN binding3.20E-02
127GO:0016757: transferase activity, transferring glycosyl groups3.53E-02
128GO:0048038: quinone binding3.53E-02
129GO:0043565: sequence-specific DNA binding3.70E-02
130GO:0016491: oxidoreductase activity3.78E-02
131GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.87E-02
132GO:0046872: metal ion binding4.05E-02
133GO:0008237: metallopeptidase activity4.22E-02
134GO:0051213: dioxygenase activity4.58E-02
RankGO TermAdjusted P value
1GO:0005674: transcription factor TFIIF complex0.00E+00
2GO:0005886: plasma membrane1.05E-13
3GO:0000164: protein phosphatase type 1 complex1.19E-04
4GO:0016021: integral component of membrane1.54E-04
5GO:0005773: vacuole2.10E-04
6GO:0005911: cell-cell junction3.50E-04
7GO:0031304: intrinsic component of mitochondrial inner membrane7.62E-04
8GO:0005901: caveola7.62E-04
9GO:0005764: lysosome1.29E-03
10GO:0005829: cytosol1.46E-03
11GO:0005794: Golgi apparatus1.68E-03
12GO:0005968: Rab-protein geranylgeranyltransferase complex1.78E-03
13GO:0031902: late endosome membrane1.94E-03
14GO:0005839: proteasome core complex2.16E-03
15GO:0009506: plasmodesma2.44E-03
16GO:0005777: peroxisome2.66E-03
17GO:0005945: 6-phosphofructokinase complex3.05E-03
18GO:0005783: endoplasmic reticulum3.26E-03
19GO:0030904: retromer complex3.76E-03
20GO:0019898: extrinsic component of membrane4.07E-03
21GO:0009504: cell plate4.07E-03
22GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane5.36E-03
23GO:0005778: peroxisomal membrane5.61E-03
24GO:0030131: clathrin adaptor complex6.22E-03
25GO:0005789: endoplasmic reticulum membrane6.63E-03
26GO:0005779: integral component of peroxisomal membrane7.14E-03
27GO:0000148: 1,3-beta-D-glucan synthase complex7.14E-03
28GO:0016604: nuclear body9.10E-03
29GO:0030665: clathrin-coated vesicle membrane9.10E-03
30GO:0017119: Golgi transport complex1.01E-02
31GO:0031012: extracellular matrix1.35E-02
32GO:0005635: nuclear envelope1.96E-02
33GO:0005741: mitochondrial outer membrane2.13E-02
34GO:0005834: heterotrimeric G-protein complex2.30E-02
35GO:0005623: cell3.34E-02
36GO:0009524: phragmoplast3.43E-02
37GO:0032580: Golgi cisterna membrane4.04E-02
38GO:0005802: trans-Golgi network4.72E-02
39GO:0005788: endoplasmic reticulum lumen4.77E-02
40GO:0005667: transcription factor complex4.95E-02
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Gene type



Gene DE type