GO Enrichment Analysis of Co-expressed Genes with
AT3G22120
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 2 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 3 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 4 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 5 | GO:2000605: positive regulation of secondary growth | 0.00E+00 |
| 6 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 7 | GO:0071482: cellular response to light stimulus | 1.75E-04 |
| 8 | GO:0043266: regulation of potassium ion transport | 1.80E-04 |
| 9 | GO:0010480: microsporocyte differentiation | 1.80E-04 |
| 10 | GO:0031338: regulation of vesicle fusion | 1.80E-04 |
| 11 | GO:0071461: cellular response to redox state | 1.80E-04 |
| 12 | GO:2000021: regulation of ion homeostasis | 1.80E-04 |
| 13 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.80E-04 |
| 14 | GO:0010206: photosystem II repair | 2.13E-04 |
| 15 | GO:0015995: chlorophyll biosynthetic process | 3.01E-04 |
| 16 | GO:0080005: photosystem stoichiometry adjustment | 4.05E-04 |
| 17 | GO:0019388: galactose catabolic process | 4.05E-04 |
| 18 | GO:0018026: peptidyl-lysine monomethylation | 4.05E-04 |
| 19 | GO:0046741: transport of virus in host, tissue to tissue | 4.05E-04 |
| 20 | GO:0006633: fatty acid biosynthetic process | 4.12E-04 |
| 21 | GO:0006518: peptide metabolic process | 6.61E-04 |
| 22 | GO:0090630: activation of GTPase activity | 6.61E-04 |
| 23 | GO:2001295: malonyl-CoA biosynthetic process | 6.61E-04 |
| 24 | GO:0009226: nucleotide-sugar biosynthetic process | 9.45E-04 |
| 25 | GO:0009590: detection of gravity | 9.45E-04 |
| 26 | GO:0043572: plastid fission | 9.45E-04 |
| 27 | GO:2001141: regulation of RNA biosynthetic process | 9.45E-04 |
| 28 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 9.45E-04 |
| 29 | GO:0051016: barbed-end actin filament capping | 9.45E-04 |
| 30 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 1.25E-03 |
| 31 | GO:0051781: positive regulation of cell division | 1.25E-03 |
| 32 | GO:0000304: response to singlet oxygen | 1.59E-03 |
| 33 | GO:0007094: mitotic spindle assembly checkpoint | 1.59E-03 |
| 34 | GO:0016123: xanthophyll biosynthetic process | 1.59E-03 |
| 35 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.96E-03 |
| 36 | GO:0006796: phosphate-containing compound metabolic process | 1.96E-03 |
| 37 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.96E-03 |
| 38 | GO:0006751: glutathione catabolic process | 1.96E-03 |
| 39 | GO:0010027: thylakoid membrane organization | 2.42E-03 |
| 40 | GO:0005975: carbohydrate metabolic process | 2.72E-03 |
| 41 | GO:0051693: actin filament capping | 2.77E-03 |
| 42 | GO:0048437: floral organ development | 2.77E-03 |
| 43 | GO:0009817: defense response to fungus, incompatible interaction | 3.15E-03 |
| 44 | GO:0005978: glycogen biosynthetic process | 3.21E-03 |
| 45 | GO:0006526: arginine biosynthetic process | 3.67E-03 |
| 46 | GO:0032544: plastid translation | 3.67E-03 |
| 47 | GO:0015996: chlorophyll catabolic process | 3.67E-03 |
| 48 | GO:0009657: plastid organization | 3.67E-03 |
| 49 | GO:0006754: ATP biosynthetic process | 4.15E-03 |
| 50 | GO:0000373: Group II intron splicing | 4.15E-03 |
| 51 | GO:0000902: cell morphogenesis | 4.15E-03 |
| 52 | GO:0007346: regulation of mitotic cell cycle | 4.65E-03 |
| 53 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.65E-03 |
| 54 | GO:1900865: chloroplast RNA modification | 4.65E-03 |
| 55 | GO:0009658: chloroplast organization | 5.04E-03 |
| 56 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.18E-03 |
| 57 | GO:1903507: negative regulation of nucleic acid-templated transcription | 5.72E-03 |
| 58 | GO:0006352: DNA-templated transcription, initiation | 5.72E-03 |
| 59 | GO:0018119: peptidyl-cysteine S-nitrosylation | 5.72E-03 |
| 60 | GO:0048229: gametophyte development | 5.72E-03 |
| 61 | GO:0046856: phosphatidylinositol dephosphorylation | 5.72E-03 |
| 62 | GO:0006415: translational termination | 5.72E-03 |
| 63 | GO:0006820: anion transport | 6.28E-03 |
| 64 | GO:0016024: CDP-diacylglycerol biosynthetic process | 6.28E-03 |
| 65 | GO:0006006: glucose metabolic process | 6.86E-03 |
| 66 | GO:0030036: actin cytoskeleton organization | 6.86E-03 |
| 67 | GO:0010075: regulation of meristem growth | 6.86E-03 |
| 68 | GO:0010207: photosystem II assembly | 7.46E-03 |
| 69 | GO:0007015: actin filament organization | 7.46E-03 |
| 70 | GO:0009934: regulation of meristem structural organization | 7.46E-03 |
| 71 | GO:0010020: chloroplast fission | 7.46E-03 |
| 72 | GO:0015979: photosynthesis | 7.85E-03 |
| 73 | GO:0071732: cellular response to nitric oxide | 8.08E-03 |
| 74 | GO:0048316: seed development | 8.42E-03 |
| 75 | GO:0007010: cytoskeleton organization | 9.37E-03 |
| 76 | GO:0031408: oxylipin biosynthetic process | 1.07E-02 |
| 77 | GO:0061077: chaperone-mediated protein folding | 1.07E-02 |
| 78 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.14E-02 |
| 79 | GO:0035428: hexose transmembrane transport | 1.14E-02 |
| 80 | GO:0071369: cellular response to ethylene stimulus | 1.22E-02 |
| 81 | GO:0006012: galactose metabolic process | 1.22E-02 |
| 82 | GO:0009306: protein secretion | 1.29E-02 |
| 83 | GO:0016117: carotenoid biosynthetic process | 1.37E-02 |
| 84 | GO:0000413: protein peptidyl-prolyl isomerization | 1.44E-02 |
| 85 | GO:0048653: anther development | 1.44E-02 |
| 86 | GO:0006520: cellular amino acid metabolic process | 1.52E-02 |
| 87 | GO:0046323: glucose import | 1.52E-02 |
| 88 | GO:0019252: starch biosynthetic process | 1.68E-02 |
| 89 | GO:0080156: mitochondrial mRNA modification | 1.77E-02 |
| 90 | GO:0071554: cell wall organization or biogenesis | 1.77E-02 |
| 91 | GO:0002229: defense response to oomycetes | 1.77E-02 |
| 92 | GO:1901657: glycosyl compound metabolic process | 1.94E-02 |
| 93 | GO:0071281: cellular response to iron ion | 1.94E-02 |
| 94 | GO:0009735: response to cytokinin | 2.01E-02 |
| 95 | GO:0016125: sterol metabolic process | 2.03E-02 |
| 96 | GO:0051607: defense response to virus | 2.20E-02 |
| 97 | GO:0009615: response to virus | 2.30E-02 |
| 98 | GO:0016126: sterol biosynthetic process | 2.30E-02 |
| 99 | GO:0009627: systemic acquired resistance | 2.48E-02 |
| 100 | GO:0042254: ribosome biogenesis | 2.69E-02 |
| 101 | GO:0009407: toxin catabolic process | 2.97E-02 |
| 102 | GO:0007568: aging | 3.08E-02 |
| 103 | GO:0046686: response to cadmium ion | 3.09E-02 |
| 104 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.39E-02 |
| 105 | GO:0006839: mitochondrial transport | 3.60E-02 |
| 106 | GO:0009636: response to toxic substance | 4.27E-02 |
| 107 | GO:0031347: regulation of defense response | 4.50E-02 |
| 108 | GO:0042538: hyperosmotic salinity response | 4.62E-02 |
| 109 | GO:0006364: rRNA processing | 4.86E-02 |
| 110 | GO:0006486: protein glycosylation | 4.86E-02 |
| 111 | GO:0006813: potassium ion transport | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 2 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 3 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 4 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 5 | GO:0004496: mevalonate kinase activity | 0.00E+00 |
| 6 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 7 | GO:0008200: ion channel inhibitor activity | 5.89E-05 |
| 8 | GO:0004856: xylulokinase activity | 1.80E-04 |
| 9 | GO:0034256: chlorophyll(ide) b reductase activity | 1.80E-04 |
| 10 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.80E-04 |
| 11 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 1.80E-04 |
| 12 | GO:0003867: 4-aminobutyrate transaminase activity | 1.80E-04 |
| 13 | GO:0004222: metalloendopeptidase activity | 3.92E-04 |
| 14 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 4.05E-04 |
| 15 | GO:0004614: phosphoglucomutase activity | 4.05E-04 |
| 16 | GO:0003839: gamma-glutamylcyclotransferase activity | 4.05E-04 |
| 17 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 4.05E-04 |
| 18 | GO:0004075: biotin carboxylase activity | 6.61E-04 |
| 19 | GO:0030267: glyoxylate reductase (NADP) activity | 6.61E-04 |
| 20 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 6.61E-04 |
| 21 | GO:0005528: FK506 binding | 7.06E-04 |
| 22 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.84E-04 |
| 23 | GO:0016149: translation release factor activity, codon specific | 9.45E-04 |
| 24 | GO:0043023: ribosomal large subunit binding | 9.45E-04 |
| 25 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 9.45E-04 |
| 26 | GO:0016851: magnesium chelatase activity | 9.45E-04 |
| 27 | GO:0016279: protein-lysine N-methyltransferase activity | 1.25E-03 |
| 28 | GO:0001053: plastid sigma factor activity | 1.25E-03 |
| 29 | GO:0016836: hydro-lyase activity | 1.25E-03 |
| 30 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.25E-03 |
| 31 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.25E-03 |
| 32 | GO:0016987: sigma factor activity | 1.25E-03 |
| 33 | GO:0003989: acetyl-CoA carboxylase activity | 1.59E-03 |
| 34 | GO:0008381: mechanically-gated ion channel activity | 1.59E-03 |
| 35 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.59E-03 |
| 36 | GO:0017137: Rab GTPase binding | 1.59E-03 |
| 37 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 1.96E-03 |
| 38 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.96E-03 |
| 39 | GO:0042578: phosphoric ester hydrolase activity | 1.96E-03 |
| 40 | GO:0016491: oxidoreductase activity | 2.05E-03 |
| 41 | GO:0008237: metallopeptidase activity | 2.16E-03 |
| 42 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.35E-03 |
| 43 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 2.35E-03 |
| 44 | GO:0051920: peroxiredoxin activity | 2.35E-03 |
| 45 | GO:0015631: tubulin binding | 2.35E-03 |
| 46 | GO:0004427: inorganic diphosphatase activity | 2.77E-03 |
| 47 | GO:0008236: serine-type peptidase activity | 2.99E-03 |
| 48 | GO:0043022: ribosome binding | 3.21E-03 |
| 49 | GO:0016209: antioxidant activity | 3.21E-03 |
| 50 | GO:0004034: aldose 1-epimerase activity | 3.21E-03 |
| 51 | GO:0004033: aldo-keto reductase (NADP) activity | 3.21E-03 |
| 52 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 4.15E-03 |
| 53 | GO:0003747: translation release factor activity | 4.15E-03 |
| 54 | GO:0043621: protein self-association | 5.54E-03 |
| 55 | GO:0008378: galactosyltransferase activity | 6.28E-03 |
| 56 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 6.28E-03 |
| 57 | GO:0004565: beta-galactosidase activity | 6.86E-03 |
| 58 | GO:0004871: signal transducer activity | 8.84E-03 |
| 59 | GO:0003714: transcription corepressor activity | 9.37E-03 |
| 60 | GO:0008324: cation transmembrane transporter activity | 1.00E-02 |
| 61 | GO:0004176: ATP-dependent peptidase activity | 1.07E-02 |
| 62 | GO:0033612: receptor serine/threonine kinase binding | 1.07E-02 |
| 63 | GO:0019843: rRNA binding | 1.23E-02 |
| 64 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.27E-02 |
| 65 | GO:0004252: serine-type endopeptidase activity | 1.37E-02 |
| 66 | GO:0005355: glucose transmembrane transporter activity | 1.60E-02 |
| 67 | GO:0016853: isomerase activity | 1.60E-02 |
| 68 | GO:0019901: protein kinase binding | 1.68E-02 |
| 69 | GO:0048038: quinone binding | 1.77E-02 |
| 70 | GO:0016887: ATPase activity | 1.90E-02 |
| 71 | GO:0051015: actin filament binding | 1.94E-02 |
| 72 | GO:0016413: O-acetyltransferase activity | 2.20E-02 |
| 73 | GO:0016597: amino acid binding | 2.20E-02 |
| 74 | GO:0004721: phosphoprotein phosphatase activity | 2.58E-02 |
| 75 | GO:0102483: scopolin beta-glucosidase activity | 2.58E-02 |
| 76 | GO:0000287: magnesium ion binding | 2.59E-02 |
| 77 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.77E-02 |
| 78 | GO:0005096: GTPase activator activity | 2.87E-02 |
| 79 | GO:0030246: carbohydrate binding | 3.26E-02 |
| 80 | GO:0004497: monooxygenase activity | 3.27E-02 |
| 81 | GO:0005507: copper ion binding | 3.49E-02 |
| 82 | GO:0008422: beta-glucosidase activity | 3.50E-02 |
| 83 | GO:0004364: glutathione transferase activity | 3.82E-02 |
| 84 | GO:0051287: NAD binding | 4.50E-02 |
| 85 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.86E-02 |
| 86 | GO:0005509: calcium ion binding | 4.87E-02 |
| 87 | GO:0003690: double-stranded DNA binding | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 4.42E-27 |
| 3 | GO:0009570: chloroplast stroma | 5.38E-15 |
| 4 | GO:0009941: chloroplast envelope | 2.50E-12 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 9.04E-11 |
| 6 | GO:0009579: thylakoid | 4.62E-10 |
| 7 | GO:0009534: chloroplast thylakoid | 7.21E-09 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 8.23E-08 |
| 9 | GO:0031977: thylakoid lumen | 8.38E-08 |
| 10 | GO:0009536: plastid | 1.11E-04 |
| 11 | GO:0008290: F-actin capping protein complex | 4.05E-04 |
| 12 | GO:0010007: magnesium chelatase complex | 6.61E-04 |
| 13 | GO:0005828: kinetochore microtubule | 1.25E-03 |
| 14 | GO:0031969: chloroplast membrane | 1.28E-03 |
| 15 | GO:0000776: kinetochore | 1.59E-03 |
| 16 | GO:0000777: condensed chromosome kinetochore | 2.35E-03 |
| 17 | GO:0010369: chromocenter | 2.35E-03 |
| 18 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.15E-03 |
| 19 | GO:0005876: spindle microtubule | 4.65E-03 |
| 20 | GO:0005884: actin filament | 5.72E-03 |
| 21 | GO:0000311: plastid large ribosomal subunit | 6.28E-03 |
| 22 | GO:0043234: protein complex | 8.71E-03 |
| 23 | GO:0009706: chloroplast inner membrane | 9.83E-03 |
| 24 | GO:0009654: photosystem II oxygen evolving complex | 1.00E-02 |
| 25 | GO:0010287: plastoglobule | 1.17E-02 |
| 26 | GO:0019898: extrinsic component of membrane | 1.68E-02 |
| 27 | GO:0010319: stromule | 2.11E-02 |
| 28 | GO:0030529: intracellular ribonucleoprotein complex | 2.30E-02 |
| 29 | GO:0048046: apoplast | 4.05E-02 |