co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G21080

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006793: phosphorus metabolic process	0.00E+00
2	GO:0006182: cGMP biosynthetic process	0.00E+00
3	GO:0006099: tricarboxylic acid cycle	2.22E-05
4	GO:0051938: L-glutamate import	1.44E-04
5	GO:1990641: response to iron ion starvation	1.44E-04
6	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.44E-04
7	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.44E-04
8	GO:0046244: salicylic acid catabolic process	1.44E-04
9	GO:0048455: stamen formation	1.44E-04
10	GO:0009688: abscisic acid biosynthetic process	2.18E-04
11	GO:0010150: leaf senescence	2.91E-04
12	GO:0006790: sulfur compound metabolic process	2.93E-04
13	GO:0051788: response to misfolded protein	3.29E-04
14	GO:0044419: interspecies interaction between organisms	3.29E-04
15	GO:0007051: spindle organization	3.29E-04
16	GO:0006101: citrate metabolic process	3.29E-04
17	GO:0097054: L-glutamate biosynthetic process	3.29E-04
18	GO:0043091: L-arginine import	3.29E-04
19	GO:0051592: response to calcium ion	3.29E-04
20	GO:0015802: basic amino acid transport	3.29E-04
21	GO:0046854: phosphatidylinositol phosphorylation	4.23E-04
22	GO:0010351: lithium ion transport	5.40E-04
23	GO:0006979: response to oxidative stress	6.48E-04
24	GO:0002239: response to oomycetes	7.73E-04
25	GO:0006537: glutamate biosynthetic process	7.73E-04
26	GO:0006882: cellular zinc ion homeostasis	7.73E-04
27	GO:0045017: glycerolipid biosynthetic process	7.73E-04
28	GO:0051028: mRNA transport	8.77E-04
29	GO:0010363: regulation of plant-type hypersensitive response	1.02E-03
30	GO:0019676: ammonia assimilation cycle	1.02E-03
31	GO:0010225: response to UV-C	1.29E-03
32	GO:0006405: RNA export from nucleus	1.29E-03
33	GO:0034052: positive regulation of plant-type hypersensitive response	1.29E-03
34	GO:0000304: response to singlet oxygen	1.29E-03
35	GO:0006097: glyoxylate cycle	1.29E-03
36	GO:0043248: proteasome assembly	1.59E-03
37	GO:0000060: protein import into nucleus, translocation	1.59E-03
38	GO:0006561: proline biosynthetic process	1.59E-03
39	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	1.59E-03
40	GO:0010256: endomembrane system organization	1.59E-03
41	GO:0009615: response to virus	1.78E-03
42	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	1.91E-03
43	GO:1900056: negative regulation of leaf senescence	2.24E-03
44	GO:0019745: pentacyclic triterpenoid biosynthetic process	2.24E-03
45	GO:0000082: G1/S transition of mitotic cell cycle	2.24E-03
46	GO:0042773: ATP synthesis coupled electron transport	2.24E-03
47	GO:0030026: cellular manganese ion homeostasis	2.24E-03
48	GO:0048528: post-embryonic root development	2.24E-03
49	GO:0009617: response to bacterium	2.44E-03
50	GO:0009407: toxin catabolic process	2.55E-03
51	GO:0009061: anaerobic respiration	2.60E-03
52	GO:0006102: isocitrate metabolic process	2.60E-03
53	GO:0009853: photorespiration	2.92E-03
54	GO:0010120: camalexin biosynthetic process	2.96E-03
55	GO:0006098: pentose-phosphate shunt	3.35E-03
56	GO:0010112: regulation of systemic acquired resistance	3.35E-03
57	GO:0051707: response to other organism	3.75E-03
58	GO:0043067: regulation of programmed cell death	3.76E-03
59	GO:0010162: seed dormancy process	4.18E-03
60	GO:0055062: phosphate ion homeostasis	4.18E-03
61	GO:0007064: mitotic sister chromatid cohesion	4.18E-03
62	GO:0009636: response to toxic substance	4.22E-03
63	GO:0015770: sucrose transport	4.61E-03
64	GO:0000272: polysaccharide catabolic process	4.61E-03
65	GO:0055085: transmembrane transport	4.91E-03
66	GO:0006468: protein phosphorylation	4.93E-03
67	GO:0006486: protein glycosylation	5.05E-03
68	GO:0012501: programmed cell death	5.06E-03
69	GO:0009718: anthocyanin-containing compound biosynthetic process	5.52E-03
70	GO:0006094: gluconeogenesis	5.52E-03
71	GO:0046686: response to cadmium ion	5.56E-03
72	GO:0002237: response to molecule of bacterial origin	6.00E-03
73	GO:0009626: plant-type hypersensitive response	6.35E-03
74	GO:0070588: calcium ion transmembrane transport	6.50E-03
75	GO:0009969: xyloglucan biosynthetic process	6.50E-03
76	GO:0009620: response to fungus	6.56E-03
77	GO:0032259: methylation	6.90E-03
78	GO:0009651: response to salt stress	6.91E-03
79	GO:0009751: response to salicylic acid	7.17E-03
80	GO:0009624: response to nematode	7.18E-03
81	GO:0009408: response to heat	7.30E-03
82	GO:0030150: protein import into mitochondrial matrix	7.52E-03
83	GO:0005992: trehalose biosynthetic process	7.52E-03
84	GO:0006874: cellular calcium ion homeostasis	8.06E-03
85	GO:0003333: amino acid transmembrane transport	8.61E-03
86	GO:0016998: cell wall macromolecule catabolic process	8.61E-03
87	GO:0035428: hexose transmembrane transport	9.17E-03
88	GO:0071456: cellular response to hypoxia	9.17E-03
89	GO:0019748: secondary metabolic process	9.17E-03
90	GO:0009737: response to abscisic acid	9.58E-03
91	GO:0006012: galactose metabolic process	9.75E-03
92	GO:0010118: stomatal movement	1.16E-02
93	GO:0046323: glucose import	1.22E-02
94	GO:0006814: sodium ion transport	1.28E-02
95	GO:0042752: regulation of circadian rhythm	1.28E-02
96	GO:0009851: auxin biosynthetic process	1.35E-02
97	GO:0002229: defense response to oomycetes	1.41E-02
98	GO:0015031: protein transport	1.43E-02
99	GO:0030163: protein catabolic process	1.55E-02
100	GO:0010252: auxin homeostasis	1.62E-02
101	GO:0010029: regulation of seed germination	1.91E-02
102	GO:0009816: defense response to bacterium, incompatible interaction	1.91E-02
103	GO:0006974: cellular response to DNA damage stimulus	1.99E-02
104	GO:0016311: dephosphorylation	2.14E-02
105	GO:0009817: defense response to fungus, incompatible interaction	2.22E-02
106	GO:0008219: cell death	2.22E-02
107	GO:0006511: ubiquitin-dependent protein catabolic process	2.23E-02
108	GO:0009832: plant-type cell wall biogenesis	2.30E-02
109	GO:0048767: root hair elongation	2.30E-02
110	GO:0010043: response to zinc ion	2.46E-02
111	GO:0006839: mitochondrial transport	2.88E-02
112	GO:0042542: response to hydrogen peroxide	3.06E-02
113	GO:0009744: response to sucrose	3.15E-02
114	GO:0008643: carbohydrate transport	3.33E-02
115	GO:0006855: drug transmembrane transport	3.51E-02
116	GO:0009414: response to water deprivation	3.55E-02
117	GO:0031347: regulation of defense response	3.60E-02
118	GO:0042742: defense response to bacterium	3.66E-02
119	GO:0042538: hyperosmotic salinity response	3.70E-02
120	GO:0006812: cation transport	3.70E-02
121	GO:0009664: plant-type cell wall organization	3.70E-02
122	GO:0009809: lignin biosynthetic process	3.89E-02
123	GO:0051603: proteolysis involved in cellular protein catabolic process	3.98E-02
124	GO:0006417: regulation of translation	4.18E-02
125	GO:0006096: glycolytic process	4.38E-02
126	GO:0006952: defense response	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:1990837: sequence-specific double-stranded DNA binding	0.00E+00
2	GO:0015930: glutamate synthase activity	0.00E+00
3	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
4	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	3.82E-06
5	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	5.74E-05
6	GO:0016041: glutamate synthase (ferredoxin) activity	1.44E-04
7	GO:0031127: alpha-(1,2)-fucosyltransferase activity	1.44E-04
8	GO:0008559: xenobiotic-transporting ATPase activity	2.54E-04
9	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.77E-04
10	GO:0009055: electron carrier activity	3.01E-04
11	GO:0004775: succinate-CoA ligase (ADP-forming) activity	3.29E-04
12	GO:0048531: beta-1,3-galactosyltransferase activity	3.29E-04
13	GO:0019172: glyoxalase III activity	3.29E-04
14	GO:0015036: disulfide oxidoreductase activity	3.29E-04
15	GO:0008517: folic acid transporter activity	3.29E-04
16	GO:0004776: succinate-CoA ligase (GDP-forming) activity	3.29E-04
17	GO:0003994: aconitate hydratase activity	3.29E-04
18	GO:0051539: 4 iron, 4 sulfur cluster binding	3.71E-04
19	GO:0005524: ATP binding	3.88E-04
20	GO:0004383: guanylate cyclase activity	5.40E-04
21	GO:0050660: flavin adenine dinucleotide binding	7.19E-04
22	GO:0001653: peptide receptor activity	7.73E-04
23	GO:0015181: arginine transmembrane transporter activity	7.73E-04
24	GO:0042299: lupeol synthase activity	7.73E-04
25	GO:0015189: L-lysine transmembrane transporter activity	7.73E-04
26	GO:0015369: calcium:proton antiporter activity	1.02E-03
27	GO:0005313: L-glutamate transmembrane transporter activity	1.02E-03
28	GO:0016866: intramolecular transferase activity	1.02E-03
29	GO:0004031: aldehyde oxidase activity	1.02E-03
30	GO:0050302: indole-3-acetaldehyde oxidase activity	1.02E-03
31	GO:0010279: indole-3-acetic acid amido synthetase activity	1.02E-03
32	GO:0015368: calcium:cation antiporter activity	1.02E-03
33	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.24E-03
34	GO:0015145: monosaccharide transmembrane transporter activity	1.29E-03
35	GO:0000104: succinate dehydrogenase activity	1.29E-03
36	GO:0008177: succinate dehydrogenase (ubiquinone) activity	1.29E-03
37	GO:0005496: steroid binding	1.29E-03
38	GO:0051538: 3 iron, 4 sulfur cluster binding	1.29E-03
39	GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity	1.29E-03
40	GO:0004332: fructose-bisphosphate aldolase activity	1.59E-03
41	GO:0102229: amylopectin maltohydrolase activity	1.59E-03
42	GO:0031593: polyubiquitin binding	1.59E-03
43	GO:0004556: alpha-amylase activity	1.59E-03
44	GO:0016161: beta-amylase activity	1.91E-03
45	GO:0003978: UDP-glucose 4-epimerase activity	1.91E-03
46	GO:0004144: diacylglycerol O-acyltransferase activity	1.91E-03
47	GO:0016301: kinase activity	2.11E-03
48	GO:0005509: calcium ion binding	2.22E-03
49	GO:0008506: sucrose:proton symporter activity	2.24E-03
50	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	2.24E-03
51	GO:0015491: cation:cation antiporter activity	2.60E-03
52	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.64E-03
53	GO:0008417: fucosyltransferase activity	3.35E-03
54	GO:0004364: glutathione transferase activity	3.61E-03
55	GO:0015174: basic amino acid transmembrane transporter activity	3.76E-03
56	GO:0045309: protein phosphorylated amino acid binding	3.76E-03
57	GO:0051537: 2 iron, 2 sulfur cluster binding	4.06E-03
58	GO:0008171: O-methyltransferase activity	4.18E-03
59	GO:0019904: protein domain specific binding	4.61E-03
60	GO:0004674: protein serine/threonine kinase activity	5.05E-03
61	GO:0015114: phosphate ion transmembrane transporter activity	5.52E-03
62	GO:0005388: calcium-transporting ATPase activity	5.52E-03
63	GO:0015266: protein channel activity	5.52E-03
64	GO:0051536: iron-sulfur cluster binding	7.52E-03
65	GO:0003954: NADH dehydrogenase activity	7.52E-03
66	GO:0004298: threonine-type endopeptidase activity	8.61E-03
67	GO:0022891: substrate-specific transmembrane transporter activity	9.75E-03
68	GO:0008536: Ran GTPase binding	1.22E-02
69	GO:0005199: structural constituent of cell wall	1.22E-02
70	GO:0005355: glucose transmembrane transporter activity	1.28E-02
71	GO:0048038: quinone binding	1.41E-02
72	GO:0004197: cysteine-type endopeptidase activity	1.48E-02
73	GO:0051213: dioxygenase activity	1.84E-02
74	GO:0008168: methyltransferase activity	1.86E-02
75	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.99E-02
76	GO:0030247: polysaccharide binding	2.06E-02
77	GO:0004683: calmodulin-dependent protein kinase activity	2.06E-02
78	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.14E-02
79	GO:0016757: transferase activity, transferring glycosyl groups	2.14E-02
80	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.22E-02
81	GO:0005096: GTPase activator activity	2.30E-02
82	GO:0005507: copper ion binding	2.36E-02
83	GO:0004222: metalloendopeptidase activity	2.38E-02
84	GO:0050897: cobalt ion binding	2.46E-02
85	GO:0005516: calmodulin binding	2.53E-02
86	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.63E-02
87	GO:0046872: metal ion binding	3.91E-02
88	GO:0015171: amino acid transmembrane transporter activity	4.18E-02
89	GO:0008234: cysteine-type peptidase activity	4.18E-02
90	GO:0045735: nutrient reservoir activity	4.38E-02
91	GO:0051082: unfolded protein binding	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	9.94E-05
2	GO:0045273: respiratory chain complex II	9.94E-05
3	GO:0031314: extrinsic component of mitochondrial inner membrane	3.29E-04
4	GO:0009530: primary cell wall	5.40E-04
5	GO:0045271: respiratory chain complex I	5.75E-04
6	GO:0005747: mitochondrial respiratory chain complex I	8.15E-04
7	GO:0005643: nuclear pore	2.31E-03
8	GO:0031305: integral component of mitochondrial inner membrane	2.60E-03
9	GO:0000325: plant-type vacuole	2.67E-03
10	GO:0008540: proteasome regulatory particle, base subcomplex	3.76E-03
11	GO:0031966: mitochondrial membrane	4.70E-03
12	GO:0000502: proteasome complex	5.05E-03
13	GO:0005635: nuclear envelope	5.40E-03
14	GO:0005750: mitochondrial respiratory chain complex III	6.00E-03
15	GO:0005794: Golgi apparatus	6.23E-03
16	GO:0005886: plasma membrane	6.60E-03
17	GO:0005774: vacuolar membrane	7.35E-03
18	GO:0005839: proteasome core complex	8.61E-03
19	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.03E-02
20	GO:0016021: integral component of membrane	1.04E-02
21	GO:0009705: plant-type vacuole membrane	1.24E-02
22	GO:0032580: Golgi cisterna membrane	1.62E-02
23	GO:0005743: mitochondrial inner membrane	3.28E-02
24	GO:0005834: heterotrimeric G-protein complex	4.58E-02
25	GO:0009536: plastid	4.69E-02
26	GO:0005887: integral component of plasma membrane	4.77E-02