Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G20000

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0044843: cell cycle G1/S phase transition0.00E+00
2GO:0006412: translation2.56E-74
3GO:0042254: ribosome biogenesis3.12E-31
4GO:0000027: ribosomal large subunit assembly1.84E-10
5GO:0000028: ribosomal small subunit assembly1.59E-07
6GO:0009735: response to cytokinin5.11E-06
7GO:0000494: box C/D snoRNA 3'-end processing6.10E-05
8GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)6.10E-05
9GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)6.10E-05
10GO:1990258: histone glutamine methylation6.10E-05
11GO:0006407: rRNA export from nucleus6.10E-05
12GO:0010162: seed dormancy process6.18E-05
13GO:0006364: rRNA processing1.38E-04
14GO:0009944: polarity specification of adaxial/abaxial axis1.63E-04
15GO:0009294: DNA mediated transformation2.42E-04
16GO:0002181: cytoplasmic translation2.51E-04
17GO:0042256: mature ribosome assembly2.51E-04
18GO:0090506: axillary shoot meristem initiation2.51E-04
19GO:1902626: assembly of large subunit precursor of preribosome2.51E-04
20GO:0009793: embryo development ending in seed dormancy3.21E-04
21GO:0070301: cellular response to hydrogen peroxide3.65E-04
22GO:0006241: CTP biosynthetic process3.65E-04
23GO:0006165: nucleoside diphosphate phosphorylation3.65E-04
24GO:0006228: UTP biosynthetic process3.65E-04
25GO:0032502: developmental process4.41E-04
26GO:2000032: regulation of secondary shoot formation4.88E-04
27GO:0042274: ribosomal small subunit biogenesis4.88E-04
28GO:0006183: GTP biosynthetic process4.88E-04
29GO:0071493: cellular response to UV-B6.19E-04
30GO:0031167: rRNA methylation6.19E-04
31GO:0001510: RNA methylation1.38E-03
32GO:0001558: regulation of cell growth1.38E-03
33GO:0006626: protein targeting to mitochondrion2.52E-03
34GO:0010229: inflorescence development2.52E-03
35GO:0010102: lateral root morphogenesis2.52E-03
36GO:0048467: gynoecium development2.74E-03
37GO:0051302: regulation of cell division3.65E-03
38GO:0007005: mitochondrion organization4.15E-03
39GO:0040007: growth4.40E-03
40GO:0008033: tRNA processing5.19E-03
41GO:0000413: protein peptidyl-prolyl isomerization5.19E-03
42GO:0009791: post-embryonic development6.03E-03
43GO:0010252: auxin homeostasis7.21E-03
44GO:0010043: response to zinc ion1.09E-02
45GO:0008283: cell proliferation1.39E-02
46GO:0046686: response to cadmium ion1.50E-02
47GO:0009965: leaf morphogenesis1.51E-02
48GO:0009734: auxin-activated signaling pathway1.57E-02
49GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.59E-02
50GO:0010224: response to UV-B1.76E-02
51GO:0016569: covalent chromatin modification2.11E-02
52GO:0006413: translational initiation3.09E-02
53GO:0009651: response to salt stress3.90E-02
54GO:0009860: pollen tube growth4.67E-02
55GO:0006970: response to osmotic stress4.67E-02
RankGO TermAdjusted P value
1GO:0016018: cyclosporin A binding0.00E+00
2GO:0003735: structural constituent of ribosome2.48E-82
3GO:0003729: mRNA binding6.94E-22
4GO:1990259: histone-glutamine methyltransferase activity6.10E-05
5GO:0004407: histone deacetylase activity1.63E-04
6GO:0008649: rRNA methyltransferase activity2.51E-04
7GO:0004550: nucleoside diphosphate kinase activity3.65E-04
8GO:0008097: 5S rRNA binding3.65E-04
9GO:0008235: metalloexopeptidase activity1.05E-03
10GO:0030515: snoRNA binding1.05E-03
11GO:0019843: rRNA binding2.86E-03
12GO:0046872: metal ion binding4.41E-03
13GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity9.82E-03
14GO:0003746: translation elongation factor activity1.16E-02
15GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.55E-02
16GO:0003743: translation initiation factor activity3.63E-02
17GO:0003723: RNA binding3.74E-02
RankGO TermAdjusted P value
1GO:0022625: cytosolic large ribosomal subunit1.68E-59
2GO:0005840: ribosome3.38E-58
3GO:0022626: cytosolic ribosome1.06E-57
4GO:0005730: nucleolus2.42E-31
5GO:0022627: cytosolic small ribosomal subunit7.34E-30
6GO:0005737: cytoplasm4.74E-20
7GO:0005829: cytosol5.90E-19
8GO:0009506: plasmodesma5.46E-17
9GO:0015934: large ribosomal subunit3.15E-10
10GO:0016020: membrane2.37E-09
11GO:0005773: vacuole1.84E-08
12GO:0005774: vacuolar membrane2.38E-08
13GO:0005618: cell wall4.73E-08
14GO:0005886: plasma membrane6.38E-07
15GO:0015935: small ribosomal subunit4.41E-06
16GO:0030686: 90S preribosome6.10E-05
17GO:0031428: box C/D snoRNP complex7.57E-04
18GO:0005742: mitochondrial outer membrane translocase complex1.38E-03
19GO:0009507: chloroplast1.52E-03
20GO:0015030: Cajal body1.73E-03
21GO:0032040: small-subunit processome2.32E-03
22GO:0005758: mitochondrial intermembrane space3.42E-03
23GO:0016592: mediator complex6.61E-03
24GO:0030529: intracellular ribonucleoprotein complex8.16E-03
25GO:0005622: intracellular3.51E-02
<
Gene type



Gene DE type