Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G19930

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042430: indole-containing compound metabolic process0.00E+00
2GO:0010360: negative regulation of anion channel activity0.00E+00
3GO:1901017: negative regulation of potassium ion transmembrane transporter activity0.00E+00
4GO:2000541: positive regulation of protein geranylgeranylation0.00E+00
5GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
6GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
7GO:0006182: cGMP biosynthetic process0.00E+00
8GO:0009617: response to bacterium4.25E-05
9GO:0009626: plant-type hypersensitive response5.38E-05
10GO:0006952: defense response5.89E-05
11GO:0006468: protein phosphorylation7.99E-05
12GO:1900056: negative regulation of leaf senescence2.16E-04
13GO:0009270: response to humidity2.80E-04
14GO:1902361: mitochondrial pyruvate transmembrane transport2.80E-04
15GO:0046244: salicylic acid catabolic process2.80E-04
16GO:0006805: xenobiotic metabolic process2.80E-04
17GO:0051938: L-glutamate import2.80E-04
18GO:1990641: response to iron ion starvation2.80E-04
19GO:0099132: ATP hydrolysis coupled cation transmembrane transport2.80E-04
20GO:0010421: hydrogen peroxide-mediated programmed cell death2.80E-04
21GO:0010120: camalexin biosynthetic process3.35E-04
22GO:0042742: defense response to bacterium3.67E-04
23GO:0010112: regulation of systemic acquired resistance4.05E-04
24GO:0046685: response to arsenic-containing substance4.05E-04
25GO:0051865: protein autoubiquitination4.05E-04
26GO:0006101: citrate metabolic process6.14E-04
27GO:0006850: mitochondrial pyruvate transport6.14E-04
28GO:0015865: purine nucleotide transport6.14E-04
29GO:0044419: interspecies interaction between organisms6.14E-04
30GO:1902000: homogentisate catabolic process6.14E-04
31GO:0019725: cellular homeostasis6.14E-04
32GO:0043132: NAD transport6.14E-04
33GO:0019441: tryptophan catabolic process to kynurenine6.14E-04
34GO:0097054: L-glutamate biosynthetic process6.14E-04
35GO:0043091: L-arginine import6.14E-04
36GO:0031648: protein destabilization6.14E-04
37GO:0015802: basic amino acid transport6.14E-04
38GO:0019374: galactolipid metabolic process6.14E-04
39GO:0012501: programmed cell death7.38E-04
40GO:0008219: cell death7.69E-04
41GO:0002237: response to molecule of bacterial origin9.39E-04
42GO:0034051: negative regulation of plant-type hypersensitive response9.96E-04
43GO:0055074: calcium ion homeostasis9.96E-04
44GO:0044375: regulation of peroxisome size9.96E-04
45GO:0045793: positive regulation of cell size9.96E-04
46GO:0010186: positive regulation of cellular defense response9.96E-04
47GO:0009072: aromatic amino acid family metabolic process9.96E-04
48GO:0010167: response to nitrate1.05E-03
49GO:0006099: tricarboxylic acid cycle1.09E-03
50GO:0006839: mitochondrial transport1.21E-03
51GO:0010150: leaf senescence1.24E-03
52GO:0006537: glutamate biosynthetic process1.42E-03
53GO:0009399: nitrogen fixation1.42E-03
54GO:0015858: nucleoside transport1.42E-03
55GO:0002679: respiratory burst involved in defense response1.42E-03
56GO:0001676: long-chain fatty acid metabolic process1.42E-03
57GO:0010116: positive regulation of abscisic acid biosynthetic process1.42E-03
58GO:0002239: response to oomycetes1.42E-03
59GO:0046902: regulation of mitochondrial membrane permeability1.42E-03
60GO:0031348: negative regulation of defense response1.70E-03
61GO:0055114: oxidation-reduction process1.73E-03
62GO:0006542: glutamine biosynthetic process1.91E-03
63GO:0019676: ammonia assimilation cycle1.91E-03
64GO:0060548: negative regulation of cell death1.91E-03
65GO:0046345: abscisic acid catabolic process1.91E-03
66GO:0048638: regulation of developmental growth1.91E-03
67GO:0010363: regulation of plant-type hypersensitive response1.91E-03
68GO:0034052: positive regulation of plant-type hypersensitive response2.43E-03
69GO:0030041: actin filament polymerization2.43E-03
70GO:0046283: anthocyanin-containing compound metabolic process2.43E-03
71GO:0006097: glyoxylate cycle2.43E-03
72GO:0018344: protein geranylgeranylation2.43E-03
73GO:0010225: response to UV-C2.43E-03
74GO:0000304: response to singlet oxygen2.43E-03
75GO:0009697: salicylic acid biosynthetic process2.43E-03
76GO:0006796: phosphate-containing compound metabolic process3.00E-03
77GO:0018258: protein O-linked glycosylation via hydroxyproline3.00E-03
78GO:0009117: nucleotide metabolic process3.00E-03
79GO:0035435: phosphate ion transmembrane transport3.00E-03
80GO:0002238: response to molecule of fungal origin3.00E-03
81GO:0006561: proline biosynthetic process3.00E-03
82GO:0006121: mitochondrial electron transport, succinate to ubiquinone3.00E-03
83GO:0010405: arabinogalactan protein metabolic process3.00E-03
84GO:0006751: glutathione catabolic process3.00E-03
85GO:0010256: endomembrane system organization3.00E-03
86GO:0009094: L-phenylalanine biosynthetic process3.62E-03
87GO:0019745: pentacyclic triterpenoid biosynthetic process4.26E-03
88GO:1902074: response to salt4.26E-03
89GO:0043090: amino acid import4.26E-03
90GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway4.26E-03
91GO:0006979: response to oxidative stress4.30E-03
92GO:0030091: protein repair4.95E-03
93GO:0009850: auxin metabolic process4.95E-03
94GO:0043068: positive regulation of programmed cell death4.95E-03
95GO:2000070: regulation of response to water deprivation4.95E-03
96GO:0006102: isocitrate metabolic process4.95E-03
97GO:0006644: phospholipid metabolic process4.95E-03
98GO:0009061: anaerobic respiration4.95E-03
99GO:0042128: nitrate assimilation5.06E-03
100GO:0010204: defense response signaling pathway, resistance gene-independent5.67E-03
101GO:0009808: lignin metabolic process5.67E-03
102GO:0009699: phenylpropanoid biosynthetic process5.67E-03
103GO:0009817: defense response to fungus, incompatible interaction5.91E-03
104GO:0009751: response to salicylic acid5.94E-03
105GO:0007338: single fertilization6.43E-03
106GO:0009407: toxin catabolic process6.51E-03
107GO:0048354: mucilage biosynthetic process involved in seed coat development7.22E-03
108GO:0008202: steroid metabolic process7.22E-03
109GO:0007166: cell surface receptor signaling pathway7.70E-03
110GO:0007064: mitotic sister chromatid cohesion8.04E-03
111GO:0009688: abscisic acid biosynthetic process8.04E-03
112GO:0043069: negative regulation of programmed cell death8.04E-03
113GO:0009682: induced systemic resistance8.90E-03
114GO:0048229: gametophyte development8.90E-03
115GO:0006631: fatty acid metabolic process8.91E-03
116GO:0016310: phosphorylation8.93E-03
117GO:0042542: response to hydrogen peroxide9.29E-03
118GO:0051707: response to other organism9.67E-03
119GO:0015706: nitrate transport9.79E-03
120GO:0002213: defense response to insect9.79E-03
121GO:0046686: response to cadmium ion1.01E-02
122GO:0009718: anthocyanin-containing compound biosynthetic process1.07E-02
123GO:0009636: response to toxic substance1.09E-02
124GO:0006855: drug transmembrane transport1.13E-02
125GO:0009266: response to temperature stimulus1.17E-02
126GO:0010143: cutin biosynthetic process1.17E-02
127GO:0070588: calcium ion transmembrane transport1.26E-02
128GO:0042343: indole glucosinolate metabolic process1.26E-02
129GO:0010025: wax biosynthetic process1.37E-02
130GO:0009863: salicylic acid mediated signaling pathway1.47E-02
131GO:0030150: protein import into mitochondrial matrix1.47E-02
132GO:0005992: trehalose biosynthetic process1.47E-02
133GO:0080167: response to karrikin1.49E-02
134GO:0010200: response to chitin1.56E-02
135GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.56E-02
136GO:0006874: cellular calcium ion homeostasis1.58E-02
137GO:0003333: amino acid transmembrane transport1.68E-02
138GO:0016998: cell wall macromolecule catabolic process1.68E-02
139GO:0098542: defense response to other organism1.68E-02
140GO:0009620: response to fungus1.70E-02
141GO:0019748: secondary metabolic process1.80E-02
142GO:0009624: response to nematode1.86E-02
143GO:0009411: response to UV1.91E-02
144GO:0006012: galactose metabolic process1.91E-02
145GO:0015031: protein transport2.04E-02
146GO:0010118: stomatal movement2.27E-02
147GO:0032259: methylation2.31E-02
148GO:0048544: recognition of pollen2.52E-02
149GO:0009851: auxin biosynthetic process2.65E-02
150GO:0008152: metabolic process2.75E-02
151GO:0000302: response to reactive oxygen species2.78E-02
152GO:0002229: defense response to oomycetes2.78E-02
153GO:0010193: response to ozone2.78E-02
154GO:0007264: small GTPase mediated signal transduction2.91E-02
155GO:0030163: protein catabolic process3.05E-02
156GO:0010252: auxin homeostasis3.19E-02
157GO:0009567: double fertilization forming a zygote and endosperm3.19E-02
158GO:0009615: response to virus3.62E-02
159GO:0009816: defense response to bacterium, incompatible interaction3.76E-02
160GO:0009607: response to biotic stimulus3.76E-02
161GO:0010468: regulation of gene expression3.84E-02
162GO:0009651: response to salt stress4.25E-02
163GO:0006499: N-terminal protein myristoylation4.68E-02
164GO:0009737: response to abscisic acid4.80E-02
165GO:0010043: response to zinc ion4.84E-02
166GO:0007568: aging4.84E-02
167GO:0048527: lateral root development4.84E-02
168GO:0006865: amino acid transport5.00E-02
RankGO TermAdjusted P value
1GO:0015930: glutamate synthase activity0.00E+00
2GO:0005092: GDP-dissociation inhibitor activity0.00E+00
3GO:0044610: FMN transmembrane transporter activity0.00E+00
4GO:0016504: peptidase activator activity0.00E+00
5GO:0016034: maleylacetoacetate isomerase activity0.00E+00
6GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
7GO:0070577: lysine-acetylated histone binding0.00E+00
8GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
9GO:0005524: ATP binding5.91E-07
10GO:0016301: kinase activity9.39E-07
11GO:0010178: IAA-amino acid conjugate hydrolase activity2.89E-05
12GO:0004674: protein serine/threonine kinase activity3.37E-05
13GO:0102391: decanoate--CoA ligase activity1.64E-04
14GO:0004467: long-chain fatty acid-CoA ligase activity2.16E-04
15GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity2.80E-04
16GO:0015230: FAD transmembrane transporter activity2.80E-04
17GO:0031957: very long-chain fatty acid-CoA ligase activity2.80E-04
18GO:0016041: glutamate synthase (ferredoxin) activity2.80E-04
19GO:0008171: O-methyltransferase activity5.60E-04
20GO:0004775: succinate-CoA ligase (ADP-forming) activity6.14E-04
21GO:0004061: arylformamidase activity6.14E-04
22GO:0015036: disulfide oxidoreductase activity6.14E-04
23GO:0004385: guanylate kinase activity6.14E-04
24GO:0008517: folic acid transporter activity6.14E-04
25GO:0004776: succinate-CoA ligase (GDP-forming) activity6.14E-04
26GO:0015228: coenzyme A transmembrane transporter activity6.14E-04
27GO:0003994: aconitate hydratase activity6.14E-04
28GO:0051724: NAD transporter activity6.14E-04
29GO:0032934: sterol binding6.14E-04
30GO:0004022: alcohol dehydrogenase (NAD) activity8.37E-04
31GO:0016614: oxidoreductase activity, acting on CH-OH group of donors9.21E-04
32GO:0003840: gamma-glutamyltransferase activity9.96E-04
33GO:0050833: pyruvate transmembrane transporter activity9.96E-04
34GO:0036374: glutathione hydrolase activity9.96E-04
35GO:0004383: guanylate cyclase activity9.96E-04
36GO:0016805: dipeptidase activity9.96E-04
37GO:0005093: Rab GDP-dissociation inhibitor activity9.96E-04
38GO:0005509: calcium ion binding1.07E-03
39GO:0004364: glutathione transferase activity1.35E-03
40GO:0015181: arginine transmembrane transporter activity1.42E-03
41GO:0042299: lupeol synthase activity1.42E-03
42GO:0015189: L-lysine transmembrane transporter activity1.42E-03
43GO:0008276: protein methyltransferase activity1.42E-03
44GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.42E-03
45GO:0004298: threonine-type endopeptidase activity1.56E-03
46GO:0009055: electron carrier activity1.63E-03
47GO:0070628: proteasome binding1.91E-03
48GO:0004031: aldehyde oxidase activity1.91E-03
49GO:0050302: indole-3-acetaldehyde oxidase activity1.91E-03
50GO:0016866: intramolecular transferase activity1.91E-03
51GO:0010279: indole-3-acetic acid amido synthetase activity1.91E-03
52GO:0047769: arogenate dehydratase activity1.91E-03
53GO:0004737: pyruvate decarboxylase activity1.91E-03
54GO:0004664: prephenate dehydratase activity1.91E-03
55GO:0005313: L-glutamate transmembrane transporter activity1.91E-03
56GO:0016491: oxidoreductase activity2.32E-03
57GO:0008177: succinate dehydrogenase (ubiquinone) activity2.43E-03
58GO:0080122: AMP transmembrane transporter activity2.43E-03
59GO:0017137: Rab GTPase binding2.43E-03
60GO:0000104: succinate dehydrogenase activity2.43E-03
61GO:0005496: steroid binding2.43E-03
62GO:0051538: 3 iron, 4 sulfur cluster binding2.43E-03
63GO:0005471: ATP:ADP antiporter activity2.43E-03
64GO:0004356: glutamate-ammonia ligase activity2.43E-03
65GO:0010294: abscisic acid glucosyltransferase activity2.43E-03
66GO:0047714: galactolipase activity3.00E-03
67GO:0004029: aldehyde dehydrogenase (NAD) activity3.00E-03
68GO:0016462: pyrophosphatase activity3.00E-03
69GO:0030976: thiamine pyrophosphate binding3.00E-03
70GO:1990714: hydroxyproline O-galactosyltransferase activity3.00E-03
71GO:0050660: flavin adenine dinucleotide binding3.02E-03
72GO:0005347: ATP transmembrane transporter activity3.62E-03
73GO:0003978: UDP-glucose 4-epimerase activity3.62E-03
74GO:0008113: peptide-methionine (S)-S-oxide reductase activity3.62E-03
75GO:0015217: ADP transmembrane transporter activity3.62E-03
76GO:0033743: peptide-methionine (R)-S-oxide reductase activity3.62E-03
77GO:0008237: metallopeptidase activity4.03E-03
78GO:0008320: protein transmembrane transporter activity4.26E-03
79GO:0004620: phospholipase activity4.26E-03
80GO:0004143: diacylglycerol kinase activity4.26E-03
81GO:0016831: carboxy-lyase activity4.26E-03
82GO:0008235: metalloexopeptidase activity4.26E-03
83GO:0004427: inorganic diphosphatase activity4.26E-03
84GO:0005544: calcium-dependent phospholipid binding4.95E-03
85GO:0030247: polysaccharide binding5.33E-03
86GO:0004683: calmodulin-dependent protein kinase activity5.33E-03
87GO:0008970: phosphatidylcholine 1-acylhydrolase activity5.67E-03
88GO:0003951: NAD+ kinase activity5.67E-03
89GO:0008142: oxysterol binding5.67E-03
90GO:0071949: FAD binding6.43E-03
91GO:0015174: basic amino acid transmembrane transporter activity7.22E-03
92GO:0045309: protein phosphorylated amino acid binding7.22E-03
93GO:0047617: acyl-CoA hydrolase activity7.22E-03
94GO:0030955: potassium ion binding7.22E-03
95GO:0015112: nitrate transmembrane transporter activity7.22E-03
96GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity7.22E-03
97GO:0004743: pyruvate kinase activity7.22E-03
98GO:0008194: UDP-glycosyltransferase activity7.49E-03
99GO:0004713: protein tyrosine kinase activity8.04E-03
100GO:0005516: calmodulin binding8.10E-03
101GO:0019904: protein domain specific binding8.90E-03
102GO:0008794: arsenate reductase (glutaredoxin) activity8.90E-03
103GO:0004177: aminopeptidase activity8.90E-03
104GO:0008559: xenobiotic-transporting ATPase activity8.90E-03
105GO:0004672: protein kinase activity8.96E-03
106GO:0008378: galactosyltransferase activity9.79E-03
107GO:0015266: protein channel activity1.07E-02
108GO:0005315: inorganic phosphate transmembrane transporter activity1.07E-02
109GO:0015114: phosphate ion transmembrane transporter activity1.07E-02
110GO:0005388: calcium-transporting ATPase activity1.07E-02
111GO:0000287: magnesium ion binding1.11E-02
112GO:0004970: ionotropic glutamate receptor activity1.26E-02
113GO:0005217: intracellular ligand-gated ion channel activity1.26E-02
114GO:0015171: amino acid transmembrane transporter activity1.45E-02
115GO:0080043: quercetin 3-O-glucosyltransferase activity1.70E-02
116GO:0080044: quercetin 7-O-glucosyltransferase activity1.70E-02
117GO:0015035: protein disulfide oxidoreductase activity1.92E-02
118GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.06E-02
119GO:0016758: transferase activity, transferring hexosyl groups2.27E-02
120GO:0010181: FMN binding2.52E-02
121GO:0004197: cysteine-type endopeptidase activity2.91E-02
122GO:0015297: antiporter activity3.08E-02
123GO:0016597: amino acid binding3.47E-02
124GO:0051213: dioxygenase activity3.62E-02
125GO:0009931: calcium-dependent protein serine/threonine kinase activity3.91E-02
126GO:0005506: iron ion binding4.01E-02
127GO:0004806: triglyceride lipase activity4.06E-02
128GO:0042802: identical protein binding4.09E-02
129GO:0016887: ATPase activity4.19E-02
130GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.21E-02
131GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.37E-02
132GO:0015238: drug transmembrane transporter activity4.52E-02
133GO:0005096: GTPase activator activity4.52E-02
134GO:0008168: methyltransferase activity4.78E-02
135GO:0050897: cobalt ion binding4.84E-02
136GO:0030145: manganese ion binding4.84E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane5.62E-10
2GO:0005839: proteasome core complex1.26E-04
3GO:0016021: integral component of membrane1.39E-04
4GO:0031305: integral component of mitochondrial inner membrane2.73E-04
5GO:0005911: cell-cell junction2.80E-04
6GO:0005783: endoplasmic reticulum4.52E-04
7GO:0031314: extrinsic component of mitochondrial inner membrane6.14E-04
8GO:0030134: ER to Golgi transport vesicle6.14E-04
9GO:0005829: cytosol9.65E-04
10GO:0046861: glyoxysomal membrane9.96E-04
11GO:0005968: Rab-protein geranylgeranyltransferase complex1.42E-03
12GO:0005801: cis-Golgi network3.62E-03
13GO:0005794: Golgi apparatus4.58E-03
14GO:0005788: endoplasmic reticulum lumen4.79E-03
15GO:0045273: respiratory chain complex II4.95E-03
16GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)4.95E-03
17GO:0005777: peroxisome5.05E-03
18GO:0005743: mitochondrial inner membrane5.44E-03
19GO:0009514: glyoxysome5.67E-03
20GO:0019773: proteasome core complex, alpha-subunit complex5.67E-03
21GO:0005779: integral component of peroxisomal membrane5.67E-03
22GO:0005740: mitochondrial envelope8.04E-03
23GO:0000502: proteasome complex1.31E-02
24GO:0005635: nuclear envelope1.40E-02
25GO:0005741: mitochondrial outer membrane1.68E-02
26GO:0005773: vacuole1.92E-02
27GO:0005744: mitochondrial inner membrane presequence translocase complex2.03E-02
28GO:0071944: cell periphery3.05E-02
29GO:0005778: peroxisomal membrane3.33E-02
30GO:0000325: plant-type vacuole4.84E-02
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Gene type



Gene DE type