Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G19290

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000244: spliceosomal tri-snRNP complex assembly0.00E+00
2GO:0034724: DNA replication-independent nucleosome organization1.04E-05
3GO:0071902: positive regulation of protein serine/threonine kinase activity1.04E-05
4GO:0090421: embryonic meristem initiation1.04E-05
5GO:0080136: priming of cellular response to stress1.04E-05
6GO:0035335: peptidyl-tyrosine dephosphorylation2.78E-05
7GO:0043631: RNA polyadenylation2.78E-05
8GO:0010506: regulation of autophagy5.03E-05
9GO:0071230: cellular response to amino acid stimulus5.03E-05
10GO:0031929: TOR signaling5.03E-05
11GO:0010587: miRNA catabolic process7.70E-05
12GO:2000038: regulation of stomatal complex development1.07E-04
13GO:0006346: methylation-dependent chromatin silencing1.07E-04
14GO:0032968: positive regulation of transcription elongation from RNA polymerase II promoter1.07E-04
15GO:0009267: cellular response to starvation1.74E-04
16GO:2000037: regulation of stomatal complex patterning2.11E-04
17GO:0006333: chromatin assembly or disassembly2.50E-04
18GO:0030307: positive regulation of cell growth2.50E-04
19GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway2.50E-04
20GO:0006368: transcription elongation from RNA polymerase II promoter2.50E-04
21GO:0010120: camalexin biosynthetic process3.32E-04
22GO:0010204: defense response signaling pathway, resistance gene-independent3.32E-04
23GO:0009880: embryonic pattern specification3.32E-04
24GO:0001708: cell fate specification3.74E-04
25GO:0009870: defense response signaling pathway, resistance gene-dependent4.63E-04
26GO:0006378: mRNA polyadenylation5.09E-04
27GO:0046856: phosphatidylinositol dephosphorylation5.09E-04
28GO:0008380: RNA splicing5.50E-04
29GO:0008361: regulation of cell size5.55E-04
30GO:0010229: inflorescence development6.04E-04
31GO:0006970: response to osmotic stress7.57E-04
32GO:0070417: cellular response to cold1.13E-03
33GO:0006281: DNA repair1.25E-03
34GO:0006397: mRNA processing1.30E-03
35GO:0010183: pollen tube guidance1.37E-03
36GO:0000302: response to reactive oxygen species1.44E-03
37GO:0016310: phosphorylation1.55E-03
38GO:0016049: cell growth2.11E-03
39GO:0048481: plant ovule development2.19E-03
40GO:0045087: innate immune response2.56E-03
41GO:0042542: response to hydrogen peroxide2.96E-03
42GO:0006260: DNA replication3.46E-03
43GO:0006364: rRNA processing3.72E-03
44GO:0010224: response to UV-B3.81E-03
45GO:0009626: plant-type hypersensitive response4.35E-03
46GO:0042742: defense response to bacterium4.36E-03
47GO:0009620: response to fungus4.44E-03
48GO:0000398: mRNA splicing, via spliceosome5.22E-03
49GO:0009845: seed germination5.83E-03
50GO:0009409: response to cold5.89E-03
51GO:0010150: leaf senescence6.89E-03
52GO:0010228: vegetative to reproductive phase transition of meristem7.11E-03
53GO:0006470: protein dephosphorylation7.56E-03
54GO:0007166: cell surface receptor signaling pathway7.56E-03
55GO:0010468: regulation of gene expression7.79E-03
56GO:0007165: signal transduction9.06E-03
57GO:0009793: embryo development ending in seed dormancy1.01E-02
58GO:0007049: cell cycle1.01E-02
59GO:0009723: response to ethylene1.03E-02
60GO:0009651: response to salt stress1.46E-02
61GO:0048364: root development1.47E-02
62GO:0006357: regulation of transcription from RNA polymerase II promoter1.75E-02
63GO:0009555: pollen development2.15E-02
64GO:0051301: cell division2.29E-02
65GO:0006457: protein folding2.59E-02
66GO:0006979: response to oxidative stress3.58E-02
67GO:0030154: cell differentiation3.78E-02
RankGO TermAdjusted P value
1GO:0008138: protein tyrosine/serine/threonine phosphatase activity2.61E-06
2GO:0004725: protein tyrosine phosphatase activity1.09E-05
3GO:0004534: 5'-3' exoribonuclease activity2.78E-05
4GO:0016314: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity2.78E-05
5GO:0004652: polynucleotide adenylyltransferase activity7.70E-05
6GO:0052866: phosphatidylinositol phosphate phosphatase activity7.70E-05
7GO:0031491: nucleosome binding2.11E-04
8GO:0070300: phosphatidic acid binding2.11E-04
9GO:0030674: protein binding, bridging2.90E-04
10GO:0003682: chromatin binding7.44E-04
11GO:0004707: MAP kinase activity9.11E-04
12GO:0016779: nucleotidyltransferase activity9.65E-04
13GO:0005515: protein binding1.97E-03
14GO:0004222: metalloendopeptidase activity2.33E-03
15GO:0042393: histone binding2.80E-03
16GO:0035091: phosphatidylinositol binding3.20E-03
17GO:0004386: helicase activity5.02E-03
18GO:0004675: transmembrane receptor protein serine/threonine kinase activity6.56E-03
19GO:0003723: RNA binding6.71E-03
20GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.23E-02
21GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.33E-02
22GO:0016301: kinase activity1.78E-02
23GO:0016887: ATPase activity1.95E-02
24GO:0000166: nucleotide binding2.15E-02
25GO:0044212: transcription regulatory region DNA binding3.56E-02
26GO:0005524: ATP binding4.35E-02
27GO:0004672: protein kinase activity4.68E-02
28GO:0046872: metal ion binding4.69E-02
29GO:0003729: mRNA binding4.73E-02
RankGO TermAdjusted P value
1GO:0005690: U4atac snRNP0.00E+00
2GO:0035101: FACT complex2.78E-05
3GO:0031931: TORC1 complex5.03E-05
4GO:0005719: nuclear euchromatin7.70E-05
5GO:0005687: U4 snRNP1.40E-04
6GO:0097526: spliceosomal tri-snRNP complex1.40E-04
7GO:0046540: U4/U6 x U5 tri-snRNP complex3.32E-04
8GO:0071011: precatalytic spliceosome4.18E-04
9GO:0015030: Cajal body4.18E-04
10GO:0009574: preprophase band6.04E-04
11GO:0080008: Cul4-RING E3 ubiquitin ligase complex7.70E-04
12GO:0005681: spliceosomal complex4.17E-03
13GO:0005834: heterotrimeric G-protein complex4.35E-03
14GO:0009524: phragmoplast5.72E-03
15GO:0005634: nucleus1.08E-02
16GO:0005802: trans-Golgi network3.01E-02
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Gene type



Gene DE type