co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G19010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045792: negative regulation of cell size	0.00E+00
2	GO:0009992: cellular water homeostasis	0.00E+00
3	GO:0002376: immune system process	0.00E+00
4	GO:0051553: flavone biosynthetic process	0.00E+00
5	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
6	GO:1902001: fatty acid transmembrane transport	0.00E+00
7	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
8	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
9	GO:0006468: protein phosphorylation	1.60E-07
10	GO:0031349: positive regulation of defense response	1.81E-06
11	GO:0009617: response to bacterium	1.04E-05
12	GO:0000187: activation of MAPK activity	1.53E-05
13	GO:0010150: leaf senescence	7.58E-05
14	GO:0042742: defense response to bacterium	8.60E-05
15	GO:0046470: phosphatidylcholine metabolic process	1.24E-04
16	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.59E-04
17	GO:1990022: RNA polymerase III complex localization to nucleus	1.95E-04
18	GO:0009700: indole phytoalexin biosynthetic process	1.95E-04
19	GO:0071366: cellular response to indolebutyric acid stimulus	1.95E-04
20	GO:0006643: membrane lipid metabolic process	1.95E-04
21	GO:0044376: RNA polymerase II complex import to nucleus	1.95E-04
22	GO:0060862: negative regulation of floral organ abscission	1.95E-04
23	GO:0010112: regulation of systemic acquired resistance	2.40E-04
24	GO:0006952: defense response	2.87E-04
25	GO:0010200: response to chitin	3.05E-04
26	GO:0006979: response to oxidative stress	4.06E-04
27	GO:0015908: fatty acid transport	4.38E-04
28	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.38E-04
29	GO:0071668: plant-type cell wall assembly	4.38E-04
30	GO:0055088: lipid homeostasis	4.38E-04
31	GO:0010498: proteasomal protein catabolic process	7.14E-04
32	GO:0042344: indole glucosinolate catabolic process	7.14E-04
33	GO:0006954: inflammatory response	7.14E-04
34	GO:0009062: fatty acid catabolic process	7.14E-04
35	GO:1900140: regulation of seedling development	7.14E-04
36	GO:0015783: GDP-fucose transport	7.14E-04
37	GO:0048281: inflorescence morphogenesis	7.14E-04
38	GO:0009399: nitrogen fixation	1.02E-03
39	GO:0033014: tetrapyrrole biosynthetic process	1.02E-03
40	GO:0015696: ammonium transport	1.02E-03
41	GO:0009311: oligosaccharide metabolic process	1.02E-03
42	GO:0002239: response to oomycetes	1.02E-03
43	GO:0009814: defense response, incompatible interaction	1.04E-03
44	GO:0009625: response to insect	1.13E-03
45	GO:0071219: cellular response to molecule of bacterial origin	1.35E-03
46	GO:2000038: regulation of stomatal complex development	1.35E-03
47	GO:0080142: regulation of salicylic acid biosynthetic process	1.35E-03
48	GO:0006542: glutamine biosynthetic process	1.35E-03
49	GO:0060548: negative regulation of cell death	1.35E-03
50	GO:0072488: ammonium transmembrane transport	1.35E-03
51	GO:0009414: response to water deprivation	1.43E-03
52	GO:0005513: detection of calcium ion	1.72E-03
53	GO:0031365: N-terminal protein amino acid modification	1.72E-03
54	GO:0045116: protein neddylation	1.72E-03
55	GO:0002229: defense response to oomycetes	1.89E-03
56	GO:0000302: response to reactive oxygen species	1.89E-03
57	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.12E-03
58	GO:0060918: auxin transport	2.12E-03
59	GO:0006014: D-ribose metabolic process	2.12E-03
60	GO:0010942: positive regulation of cell death	2.12E-03
61	GO:0010405: arabinogalactan protein metabolic process	2.12E-03
62	GO:0015691: cadmium ion transport	2.12E-03
63	GO:0030163: protein catabolic process	2.14E-03
64	GO:2000037: regulation of stomatal complex patterning	2.54E-03
65	GO:0009751: response to salicylic acid	2.70E-03
66	GO:0009816: defense response to bacterium, incompatible interaction	2.87E-03
67	GO:0010044: response to aluminum ion	3.00E-03
68	GO:0043090: amino acid import	3.00E-03
69	GO:0071446: cellular response to salicylic acid stimulus	3.00E-03
70	GO:1900056: negative regulation of leaf senescence	3.00E-03
71	GO:0009627: systemic acquired resistance	3.03E-03
72	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.47E-03
73	GO:0009819: drought recovery	3.47E-03
74	GO:0006605: protein targeting	3.47E-03
75	GO:0009407: toxin catabolic process	3.89E-03
76	GO:0010497: plasmodesmata-mediated intercellular transport	3.97E-03
77	GO:0010120: camalexin biosynthetic process	3.97E-03
78	GO:0030968: endoplasmic reticulum unfolded protein response	3.97E-03
79	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.97E-03
80	GO:0010208: pollen wall assembly	3.97E-03
81	GO:0007166: cell surface receptor signaling pathway	3.98E-03
82	GO:0006783: heme biosynthetic process	4.49E-03
83	GO:0015780: nucleotide-sugar transport	4.49E-03
84	GO:0046685: response to arsenic-containing substance	4.49E-03
85	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.04E-03
86	GO:2000280: regulation of root development	5.04E-03
87	GO:1900426: positive regulation of defense response to bacterium	5.04E-03
88	GO:0006995: cellular response to nitrogen starvation	5.61E-03
89	GO:0010215: cellulose microfibril organization	5.61E-03
90	GO:0052544: defense response by callose deposition in cell wall	6.20E-03
91	GO:0009636: response to toxic substance	6.46E-03
92	GO:0009965: leaf morphogenesis	6.46E-03
93	GO:0000165: MAPK cascade	6.97E-03
94	GO:0010229: inflorescence development	7.44E-03
95	GO:0055046: microgametogenesis	7.44E-03
96	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	8.04E-03
97	GO:0070588: calcium ion transmembrane transport	8.77E-03
98	GO:0009626: plant-type hypersensitive response	9.78E-03
99	GO:0080147: root hair cell development	1.02E-02
100	GO:2000377: regulation of reactive oxygen species metabolic process	1.02E-02
101	GO:0016998: cell wall macromolecule catabolic process	1.17E-02
102	GO:0007131: reciprocal meiotic recombination	1.24E-02
103	GO:0030433: ubiquitin-dependent ERAD pathway	1.24E-02
104	GO:0031348: negative regulation of defense response	1.24E-02
105	GO:0010227: floral organ abscission	1.32E-02
106	GO:0006012: galactose metabolic process	1.32E-02
107	GO:0019722: calcium-mediated signaling	1.40E-02
108	GO:0009561: megagametogenesis	1.40E-02
109	GO:0010584: pollen exine formation	1.40E-02
110	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.48E-02
111	GO:0000413: protein peptidyl-prolyl isomerization	1.57E-02
112	GO:0010051: xylem and phloem pattern formation	1.57E-02
113	GO:0042631: cellular response to water deprivation	1.57E-02
114	GO:0009790: embryo development	1.62E-02
115	GO:0010197: polar nucleus fusion	1.65E-02
116	GO:0009646: response to absence of light	1.74E-02
117	GO:0006623: protein targeting to vacuole	1.83E-02
118	GO:0010183: pollen tube guidance	1.83E-02
119	GO:0019252: starch biosynthetic process	1.83E-02
120	GO:0006635: fatty acid beta-oxidation	1.92E-02
121	GO:0019761: glucosinolate biosynthetic process	2.01E-02
122	GO:0009737: response to abscisic acid	2.02E-02
123	GO:0006470: protein dephosphorylation	2.19E-02
124	GO:0010252: auxin homeostasis	2.20E-02
125	GO:0006904: vesicle docking involved in exocytosis	2.30E-02
126	GO:0051607: defense response to virus	2.40E-02
127	GO:0042128: nitrate assimilation	2.70E-02
128	GO:0015995: chlorophyll biosynthetic process	2.80E-02
129	GO:0006950: response to stress	2.80E-02
130	GO:0016049: cell growth	2.91E-02
131	GO:0009409: response to cold	2.99E-02
132	GO:0009817: defense response to fungus, incompatible interaction	3.02E-02
133	GO:0008219: cell death	3.02E-02
134	GO:0009813: flavonoid biosynthetic process	3.12E-02
135	GO:0009631: cold acclimation	3.34E-02
136	GO:0048527: lateral root development	3.34E-02
137	GO:0010119: regulation of stomatal movement	3.34E-02
138	GO:0006865: amino acid transport	3.46E-02
139	GO:0050832: defense response to fungus	3.53E-02
140	GO:0016051: carbohydrate biosynthetic process	3.57E-02
141	GO:0080167: response to karrikin	3.68E-02
142	GO:0006099: tricarboxylic acid cycle	3.68E-02
143	GO:0006887: exocytosis	4.03E-02
144	GO:0051707: response to other organism	4.27E-02
145	GO:0009651: response to salt stress	4.30E-02
146	GO:0000209: protein polyubiquitination	4.40E-02
147	GO:0008643: carbohydrate transport	4.52E-02
148	GO:0006855: drug transmembrane transport	4.77E-02
149	GO:0031347: regulation of defense response	4.89E-02
150	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
2	GO:0005212: structural constituent of eye lens	0.00E+00
3	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
4	GO:0008752: FMN reductase activity	0.00E+00
5	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
6	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
7	GO:0033759: flavone synthase activity	0.00E+00
8	GO:0015370: solute:sodium symporter activity	0.00E+00
9	GO:0004674: protein serine/threonine kinase activity	3.30E-07
10	GO:0005509: calcium ion binding	1.23E-06
11	GO:0016301: kinase activity	5.73E-06
12	GO:0005524: ATP binding	2.49E-05
13	GO:0004656: procollagen-proline 4-dioxygenase activity	9.36E-05
14	GO:0004708: MAP kinase kinase activity	1.59E-04
15	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.59E-04
16	GO:0004325: ferrochelatase activity	1.95E-04
17	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	1.95E-04
18	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	1.95E-04
19	GO:0015245: fatty acid transporter activity	1.95E-04
20	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.95E-04
21	GO:0008809: carnitine racemase activity	1.95E-04
22	GO:0015085: calcium ion transmembrane transporter activity	1.95E-04
23	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.98E-04
24	GO:0004630: phospholipase D activity	1.98E-04
25	GO:0047364: desulfoglucosinolate sulfotransferase activity	4.38E-04
26	GO:0019781: NEDD8 activating enzyme activity	4.38E-04
27	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.43E-04
28	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	7.14E-04
29	GO:0005457: GDP-fucose transmembrane transporter activity	7.14E-04
30	GO:0031418: L-ascorbic acid binding	7.89E-04
31	GO:0015086: cadmium ion transmembrane transporter activity	1.02E-03
32	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.02E-03
33	GO:0015204: urea transmembrane transporter activity	1.35E-03
34	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.72E-03
35	GO:0004356: glutamate-ammonia ligase activity	1.72E-03
36	GO:0008641: small protein activating enzyme activity	1.72E-03
37	GO:0016746: transferase activity, transferring acyl groups	1.74E-03
38	GO:0008519: ammonium transmembrane transporter activity	2.12E-03
39	GO:0030976: thiamine pyrophosphate binding	2.12E-03
40	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.12E-03
41	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.42E-03
42	GO:0004012: phospholipid-translocating ATPase activity	2.54E-03
43	GO:0004747: ribokinase activity	2.54E-03
44	GO:0043295: glutathione binding	3.00E-03
45	GO:0008235: metalloexopeptidase activity	3.00E-03
46	GO:0008865: fructokinase activity	3.47E-03
47	GO:0004034: aldose 1-epimerase activity	3.47E-03
48	GO:0005506: iron ion binding	5.32E-03
49	GO:0004364: glutathione transferase activity	5.53E-03
50	GO:0004713: protein tyrosine kinase activity	5.61E-03
51	GO:0004177: aminopeptidase activity	6.20E-03
52	GO:0015293: symporter activity	6.46E-03
53	GO:0008378: galactosyltransferase activity	6.81E-03
54	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.44E-03
55	GO:0031072: heat shock protein binding	7.44E-03
56	GO:0005388: calcium-transporting ATPase activity	7.44E-03
57	GO:0031625: ubiquitin protein ligase binding	8.59E-03
58	GO:0008146: sulfotransferase activity	8.77E-03
59	GO:0008061: chitin binding	8.77E-03
60	GO:0003712: transcription cofactor activity	8.77E-03
61	GO:0004190: aspartic-type endopeptidase activity	8.77E-03
62	GO:0030246: carbohydrate binding	1.03E-02
63	GO:0004672: protein kinase activity	1.07E-02
64	GO:0004298: threonine-type endopeptidase activity	1.17E-02
65	GO:0033612: receptor serine/threonine kinase binding	1.17E-02
66	GO:0005516: calmodulin binding	1.22E-02
67	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.42E-02
68	GO:0010181: FMN binding	1.74E-02
69	GO:0016853: isomerase activity	1.74E-02
70	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.79E-02
71	GO:0003824: catalytic activity	2.19E-02
72	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.70E-02
73	GO:0030247: polysaccharide binding	2.80E-02
74	GO:0004683: calmodulin-dependent protein kinase activity	2.80E-02
75	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.91E-02
76	GO:0050897: cobalt ion binding	3.34E-02
77	GO:0030145: manganese ion binding	3.34E-02
78	GO:0003746: translation elongation factor activity	3.57E-02
79	GO:0008233: peptidase activity	3.62E-02
80	GO:0000987: core promoter proximal region sequence-specific DNA binding	3.68E-02
81	GO:0004497: monooxygenase activity	3.68E-02
82	GO:0005507: copper ion binding	4.04E-02
83	GO:0019825: oxygen binding	4.04E-02
84	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.74E-02
85	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.77E-02
86	GO:0004722: protein serine/threonine phosphatase activity	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	2.99E-14
2	GO:0016021: integral component of membrane	6.25E-07
3	GO:0045252: oxoglutarate dehydrogenase complex	1.95E-04
4	GO:0030658: transport vesicle membrane	1.02E-03
5	GO:0005789: endoplasmic reticulum membrane	1.02E-03
6	GO:0070062: extracellular exosome	1.02E-03
7	GO:0009506: plasmodesma	3.84E-03
8	GO:0019773: proteasome core complex, alpha-subunit complex	3.97E-03
9	GO:0030665: clathrin-coated vesicle membrane	5.04E-03
10	GO:0017119: Golgi transport complex	5.61E-03
11	GO:0005829: cytosol	1.04E-02
12	GO:0005839: proteasome core complex	1.17E-02
13	GO:0031225: anchored component of membrane	1.29E-02
14	GO:0005623: cell	1.42E-02
15	GO:0016020: membrane	1.43E-02
16	GO:0005887: integral component of plasma membrane	1.86E-02
17	GO:0000145: exocyst	2.01E-02
18	GO:0071944: cell periphery	2.11E-02
19	GO:0005618: cell wall	2.20E-02
20	GO:0046658: anchored component of plasma membrane	2.54E-02
21	GO:0000139: Golgi membrane	2.99E-02
22	GO:0000151: ubiquitin ligase complex	3.02E-02
23	GO:0031902: late endosome membrane	4.03E-02
24	GO:0090406: pollen tube	4.27E-02