co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G18600

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080056: petal vascular tissue pattern formation	0.00E+00
2	GO:0071731: response to nitric oxide	0.00E+00
3	GO:0031564: transcription antitermination	0.00E+00
4	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
5	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
6	GO:0072321: chaperone-mediated protein transport	0.00E+00
7	GO:0006412: translation	7.39E-13
8	GO:0042254: ribosome biogenesis	2.34E-08
9	GO:0045041: protein import into mitochondrial intermembrane space	8.72E-08
10	GO:0000027: ribosomal large subunit assembly	9.55E-07
11	GO:0007005: mitochondrion organization	1.61E-06
12	GO:0046686: response to cadmium ion	1.80E-06
13	GO:0042026: protein refolding	6.19E-06
14	GO:0006458: 'de novo' protein folding	6.19E-06
15	GO:0009735: response to cytokinin	1.36E-05
16	GO:0010162: seed dormancy process	2.82E-05
17	GO:1990258: histone glutamine methylation	3.64E-05
18	GO:0000494: box C/D snoRNA 3'-end processing	3.64E-05
19	GO:0006626: protein targeting to mitochondrion	4.65E-05
20	GO:0006364: rRNA processing	5.12E-05
21	GO:0009944: polarity specification of adaxial/abaxial axis	7.86E-05
22	GO:0061077: chaperone-mediated protein folding	9.79E-05
23	GO:0009294: DNA mediated transformation	1.20E-04
24	GO:0045039: protein import into mitochondrial inner membrane	1.58E-04
25	GO:0006954: inflammatory response	1.58E-04
26	GO:1902626: assembly of large subunit precursor of preribosome	1.58E-04
27	GO:0006241: CTP biosynthetic process	2.33E-04
28	GO:0006165: nucleoside diphosphate phosphorylation	2.33E-04
29	GO:0006228: UTP biosynthetic process	2.33E-04
30	GO:0006164: purine nucleotide biosynthetic process	2.33E-04
31	GO:0051131: chaperone-mediated protein complex assembly	2.33E-04
32	GO:0009113: purine nucleobase biosynthetic process	2.33E-04
33	GO:0006986: response to unfolded protein	2.33E-04
34	GO:0070301: cellular response to hydrogen peroxide	2.33E-04
35	GO:0051085: chaperone mediated protein folding requiring cofactor	2.33E-04
36	GO:0006457: protein folding	3.09E-04
37	GO:0006183: GTP biosynthetic process	3.14E-04
38	GO:0071493: cellular response to UV-B	4.01E-04
39	GO:0031167: rRNA methylation	4.01E-04
40	GO:0016444: somatic cell DNA recombination	5.88E-04
41	GO:0009408: response to heat	7.36E-04
42	GO:0042255: ribosome assembly	7.90E-04
43	GO:0009651: response to salt stress	8.35E-04
44	GO:0001510: RNA methylation	8.97E-04
45	GO:0006189: 'de novo' IMP biosynthetic process	1.01E-03
46	GO:0010588: cotyledon vascular tissue pattern formation	1.62E-03
47	GO:0048467: gynoecium development	1.76E-03
48	GO:0030150: protein import into mitochondrial matrix	2.18E-03
49	GO:0006334: nucleosome assembly	2.48E-03
50	GO:0008033: tRNA processing	3.30E-03
51	GO:0000413: protein peptidyl-prolyl isomerization	3.30E-03
52	GO:0010305: leaf vascular tissue pattern formation	3.47E-03
53	GO:0032502: developmental process	4.19E-03
54	GO:0010286: heat acclimation	4.75E-03
55	GO:0016049: cell growth	5.97E-03
56	GO:0010311: lateral root formation	6.39E-03
57	GO:0009631: cold acclimation	6.83E-03
58	GO:0048527: lateral root development	6.83E-03
59	GO:0010043: response to zinc ion	6.83E-03
60	GO:0000724: double-strand break repair via homologous recombination	7.05E-03
61	GO:0008283: cell proliferation	8.68E-03
62	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	9.93E-03
63	GO:0009793: embryo development ending in seed dormancy	1.05E-02
64	GO:0048367: shoot system development	1.23E-02
65	GO:0016569: covalent chromatin modification	1.32E-02
66	GO:0006414: translational elongation	1.51E-02
67	GO:0009845: seed germination	1.70E-02
68	GO:0006413: translational initiation	1.92E-02
69	GO:0015031: protein transport	2.61E-02
70	GO:0009409: response to cold	2.78E-02
71	GO:0006970: response to osmotic stress	2.91E-02
72	GO:0009723: response to ethylene	3.06E-02
73	GO:0048366: leaf development	3.10E-02
74	GO:0045892: negative regulation of transcription, DNA-templated	3.70E-02
75	GO:0048364: root development	4.38E-02

Rank	GO Term	Adjusted P value
1	GO:0004637: phosphoribosylamine-glycine ligase activity	0.00E+00
2	GO:0001072: transcription antitermination factor activity, RNA binding	0.00E+00
3	GO:0016018: cyclosporin A binding	0.00E+00
4	GO:0003735: structural constituent of ribosome	1.16E-15
5	GO:0051082: unfolded protein binding	5.99E-08
6	GO:0003729: mRNA binding	8.71E-08
7	GO:0005507: copper ion binding	1.16E-07
8	GO:0044183: protein binding involved in protein folding	3.37E-05
9	GO:1990259: histone-glutamine methyltransferase activity	3.64E-05
10	GO:0003723: RNA binding	3.67E-05
11	GO:0004407: histone deacetylase activity	7.86E-05
12	GO:0051087: chaperone binding	8.79E-05
13	GO:0000774: adenyl-nucleotide exchange factor activity	9.09E-05
14	GO:0008649: rRNA methyltransferase activity	1.58E-04
15	GO:0004550: nucleoside diphosphate kinase activity	2.33E-04
16	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.02E-04
17	GO:0030515: snoRNA binding	6.87E-04
18	GO:0005524: ATP binding	5.94E-03
19	GO:0046872: metal ion binding	6.61E-03
20	GO:0050897: cobalt ion binding	6.83E-03
21	GO:0003746: translation elongation factor activity	7.28E-03
22	GO:0003697: single-stranded DNA binding	7.28E-03
23	GO:0042393: histone binding	7.97E-03
24	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	9.68E-03
25	GO:0003690: double-stranded DNA binding	1.10E-02
26	GO:0005525: GTP binding	1.67E-02
27	GO:0008565: protein transporter activity	1.83E-02
28	GO:0003676: nucleic acid binding	2.18E-02
29	GO:0003743: translation initiation factor activity	2.26E-02
30	GO:0003682: chromatin binding	2.87E-02
31	GO:0008233: peptidase activity	3.18E-02
32	GO:0042803: protein homodimerization activity	3.78E-02
33	GO:0003924: GTPase activity	4.25E-02

Rank	GO Term	Adjusted P value
1	GO:0042719: mitochondrial intermembrane space protein transporter complex	0.00E+00
2	GO:0005730: nucleolus	9.24E-23
3	GO:0022625: cytosolic large ribosomal subunit	4.45E-13
4	GO:0022626: cytosolic ribosome	5.73E-13
5	GO:0005774: vacuolar membrane	5.64E-10
6	GO:0015934: large ribosomal subunit	3.74E-09
7	GO:0005840: ribosome	2.19E-08
8	GO:0005829: cytosol	3.93E-07
9	GO:0005759: mitochondrial matrix	7.85E-06
10	GO:0005739: mitochondrion	8.64E-06
11	GO:0016020: membrane	9.38E-06
12	GO:0022627: cytosolic small ribosomal subunit	1.70E-05
13	GO:0009506: plasmodesma	3.29E-05
14	GO:0001405: presequence translocase-associated import motor	3.64E-05
15	GO:0005747: mitochondrial respiratory chain complex I	6.95E-05
16	GO:0005758: mitochondrial intermembrane space	7.86E-05
17	GO:0005773: vacuole	7.86E-05
18	GO:0005737: cytoplasm	1.49E-04
19	GO:0005618: cell wall	2.31E-04
20	GO:0031428: box C/D snoRNP complex	4.92E-04
21	GO:0005742: mitochondrial outer membrane translocase complex	8.97E-04
22	GO:0015030: Cajal body	1.12E-03
23	GO:0032040: small-subunit processome	1.49E-03
24	GO:0015935: small ribosomal subunit	2.48E-03
25	GO:0005743: mitochondrial inner membrane	5.30E-03
26	GO:0009507: chloroplast	2.15E-02