co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G17040

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019284: L-methionine salvage from S-adenosylmethionine	0.00E+00
2	GO:0006399: tRNA metabolic process	0.00E+00
3	GO:0034337: RNA folding	0.00E+00
4	GO:0030388: fructose 1,6-bisphosphate metabolic process	0.00E+00
5	GO:2000505: regulation of energy homeostasis	0.00E+00
6	GO:0090706: specification of plant organ position	0.00E+00
7	GO:0016553: base conversion or substitution editing	0.00E+00
8	GO:0033494: ferulate metabolic process	0.00E+00
9	GO:2000121: regulation of removal of superoxide radicals	0.00E+00
10	GO:0061635: regulation of protein complex stability	0.00E+00
11	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
12	GO:0005996: monosaccharide metabolic process	0.00E+00
13	GO:0015979: photosynthesis	8.92E-20
14	GO:0015995: chlorophyll biosynthetic process	2.98E-13
15	GO:0006412: translation	1.03E-12
16	GO:0009735: response to cytokinin	5.44E-12
17	GO:0009773: photosynthetic electron transport in photosystem I	2.94E-09
18	GO:0042254: ribosome biogenesis	7.85E-09
19	GO:0032544: plastid translation	2.27E-08
20	GO:0006000: fructose metabolic process	2.24E-07
21	GO:0019253: reductive pentose-phosphate cycle	5.87E-07
22	GO:2001141: regulation of RNA biosynthetic process	1.06E-06
23	GO:0010206: photosystem II repair	2.61E-06
24	GO:0015976: carbon utilization	3.01E-06
25	GO:0009409: response to cold	5.47E-06
26	GO:0010207: photosystem II assembly	1.89E-05
27	GO:0010196: nonphotochemical quenching	3.23E-05
28	GO:0006002: fructose 6-phosphate metabolic process	6.58E-05
29	GO:0071482: cellular response to light stimulus	6.58E-05
30	GO:0018298: protein-chromophore linkage	7.68E-05
31	GO:0010205: photoinhibition	1.15E-04
32	GO:0006782: protoporphyrinogen IX biosynthetic process	1.46E-04
33	GO:0006352: DNA-templated transcription, initiation	1.81E-04
34	GO:0010037: response to carbon dioxide	1.98E-04
35	GO:2000122: negative regulation of stomatal complex development	1.98E-04
36	GO:0045727: positive regulation of translation	1.98E-04
37	GO:0006546: glycine catabolic process	1.98E-04
38	GO:0006094: gluconeogenesis	2.65E-04
39	GO:0005986: sucrose biosynthetic process	2.65E-04
40	GO:0006006: glucose metabolic process	2.65E-04
41	GO:0045038: protein import into chloroplast thylakoid membrane	2.99E-04
42	GO:0042742: defense response to bacterium	3.23E-04
43	GO:0010027: thylakoid membrane organization	3.84E-04
44	GO:0042549: photosystem II stabilization	4.18E-04
45	GO:0006636: unsaturated fatty acid biosynthetic process	4.24E-04
46	GO:0010019: chloroplast-nucleus signaling pathway	5.54E-04
47	GO:0009768: photosynthesis, light harvesting in photosystem I	5.54E-04
48	GO:0000481: maturation of 5S rRNA	6.22E-04
49	GO:1904964: positive regulation of phytol biosynthetic process	6.22E-04
50	GO:0042371: vitamin K biosynthetic process	6.22E-04
51	GO:0071461: cellular response to redox state	6.22E-04
52	GO:1902458: positive regulation of stomatal opening	6.22E-04
53	GO:0010450: inflorescence meristem growth	6.22E-04
54	GO:0071588: hydrogen peroxide mediated signaling pathway	6.22E-04
55	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	6.22E-04
56	GO:0043489: RNA stabilization	6.22E-04
57	GO:1904966: positive regulation of vitamin E biosynthetic process	6.22E-04
58	GO:0071370: cellular response to gibberellin stimulus	6.22E-04
59	GO:0009772: photosynthetic electron transport in photosystem II	7.10E-04
60	GO:0000413: protein peptidyl-prolyl isomerization	1.07E-03
61	GO:0042631: cellular response to water deprivation	1.07E-03
62	GO:0009658: chloroplast organization	1.10E-03
63	GO:0006783: heme biosynthetic process	1.28E-03
64	GO:0034755: iron ion transmembrane transport	1.34E-03
65	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	1.34E-03
66	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.34E-03
67	GO:0006521: regulation of cellular amino acid metabolic process	1.34E-03
68	GO:0080005: photosystem stoichiometry adjustment	1.34E-03
69	GO:1900871: chloroplast mRNA modification	1.34E-03
70	GO:1902326: positive regulation of chlorophyll biosynthetic process	1.34E-03
71	GO:0009638: phototropism	1.52E-03
72	GO:0006779: porphyrin-containing compound biosynthetic process	1.52E-03
73	GO:0007623: circadian rhythm	1.92E-03
74	GO:0009750: response to fructose	2.05E-03
75	GO:0018119: peptidyl-cysteine S-nitrosylation	2.05E-03
76	GO:0006696: ergosterol biosynthetic process	2.20E-03
77	GO:0045493: xylan catabolic process	2.20E-03
78	GO:0005977: glycogen metabolic process	2.20E-03
79	GO:0045165: cell fate commitment	2.20E-03
80	GO:0006011: UDP-glucose metabolic process	2.20E-03
81	GO:0090391: granum assembly	2.20E-03
82	GO:0006518: peptide metabolic process	2.20E-03
83	GO:0006013: mannose metabolic process	2.20E-03
84	GO:1902476: chloride transmembrane transport	3.20E-03
85	GO:0051513: regulation of monopolar cell growth	3.20E-03
86	GO:0071484: cellular response to light intensity	3.20E-03
87	GO:0009800: cinnamic acid biosynthetic process	3.20E-03
88	GO:0080170: hydrogen peroxide transmembrane transport	3.20E-03
89	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	3.20E-03
90	GO:0005985: sucrose metabolic process	3.40E-03
91	GO:0009793: embryo development ending in seed dormancy	3.95E-03
92	GO:0006542: glutamine biosynthetic process	4.32E-03
93	GO:0019676: ammonia assimilation cycle	4.32E-03
94	GO:0019464: glycine decarboxylation via glycine cleavage system	4.32E-03
95	GO:0030104: water homeostasis	4.32E-03
96	GO:0015994: chlorophyll metabolic process	4.32E-03
97	GO:2000038: regulation of stomatal complex development	4.32E-03
98	GO:0008152: metabolic process	4.46E-03
99	GO:0061077: chaperone-mediated protein folding	5.11E-03
100	GO:0006461: protein complex assembly	5.55E-03
101	GO:1902183: regulation of shoot apical meristem development	5.55E-03
102	GO:0010158: abaxial cell fate specification	5.55E-03
103	GO:0032876: negative regulation of DNA endoreduplication	5.55E-03
104	GO:0030308: negative regulation of cell growth	5.55E-03
105	GO:0009247: glycolipid biosynthetic process	5.55E-03
106	GO:0034052: positive regulation of plant-type hypersensitive response	5.55E-03
107	GO:0032543: mitochondrial translation	5.55E-03
108	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	6.45E-03
109	GO:0010114: response to red light	6.52E-03
110	GO:0009306: protein secretion	6.66E-03
111	GO:0000741: karyogamy	6.88E-03
112	GO:0010942: positive regulation of cell death	6.88E-03
113	GO:0006655: phosphatidylglycerol biosynthetic process	6.88E-03
114	GO:1902456: regulation of stomatal opening	6.88E-03
115	GO:0006559: L-phenylalanine catabolic process	6.88E-03
116	GO:0032973: amino acid export	6.88E-03
117	GO:0009644: response to high light intensity	7.21E-03
118	GO:0045490: pectin catabolic process	7.79E-03
119	GO:0046686: response to cadmium ion	7.83E-03
120	GO:0010189: vitamin E biosynthetic process	8.32E-03
121	GO:1901259: chloroplast rRNA processing	8.32E-03
122	GO:0009854: oxidative photosynthetic carbon pathway	8.32E-03
123	GO:0010555: response to mannitol	8.32E-03
124	GO:2000037: regulation of stomatal complex patterning	8.32E-03
125	GO:0019509: L-methionine salvage from methylthioadenosine	8.32E-03
126	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	8.32E-03
127	GO:0050829: defense response to Gram-negative bacterium	9.86E-03
128	GO:0009610: response to symbiotic fungus	9.86E-03
129	GO:0043090: amino acid import	9.86E-03
130	GO:0006821: chloride transport	9.86E-03
131	GO:0009645: response to low light intensity stimulus	9.86E-03
132	GO:0000302: response to reactive oxygen species	1.04E-02
133	GO:0042255: ribosome assembly	1.15E-02
134	GO:2000070: regulation of response to water deprivation	1.15E-02
135	GO:0010492: maintenance of shoot apical meristem identity	1.15E-02
136	GO:0052543: callose deposition in cell wall	1.15E-02
137	GO:0048564: photosystem I assembly	1.15E-02
138	GO:0006402: mRNA catabolic process	1.15E-02
139	GO:0030091: protein repair	1.15E-02
140	GO:0009850: auxin metabolic process	1.15E-02
141	GO:0043068: positive regulation of programmed cell death	1.15E-02
142	GO:0009642: response to light intensity	1.15E-02
143	GO:0006605: protein targeting	1.15E-02
144	GO:0019375: galactolipid biosynthetic process	1.15E-02
145	GO:0032508: DNA duplex unwinding	1.15E-02
146	GO:0006096: glycolytic process	1.19E-02
147	GO:0017004: cytochrome complex assembly	1.32E-02
148	GO:0010093: specification of floral organ identity	1.32E-02
149	GO:0009699: phenylpropanoid biosynthetic process	1.32E-02
150	GO:0009657: plastid organization	1.32E-02
151	GO:0000373: Group II intron splicing	1.50E-02
152	GO:0009821: alkaloid biosynthetic process	1.50E-02
153	GO:0009051: pentose-phosphate shunt, oxidative branch	1.50E-02
154	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.50E-02
155	GO:0080144: amino acid homeostasis	1.50E-02
156	GO:2000024: regulation of leaf development	1.50E-02
157	GO:0048507: meristem development	1.50E-02
158	GO:0042128: nitrate assimilation	1.70E-02
159	GO:0006949: syncytium formation	1.89E-02
160	GO:0009299: mRNA transcription	1.89E-02
161	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.89E-02
162	GO:0010015: root morphogenesis	2.10E-02
163	GO:0019684: photosynthesis, light reaction	2.10E-02
164	GO:0009089: lysine biosynthetic process via diaminopimelate	2.10E-02
165	GO:0009698: phenylpropanoid metabolic process	2.10E-02
166	GO:0043085: positive regulation of catalytic activity	2.10E-02
167	GO:0006879: cellular iron ion homeostasis	2.10E-02
168	GO:0000272: polysaccharide catabolic process	2.10E-02
169	GO:0010218: response to far red light	2.19E-02
170	GO:0007568: aging	2.30E-02
171	GO:0010119: regulation of stomatal movement	2.30E-02
172	GO:0009631: cold acclimation	2.30E-02
173	GO:0008361: regulation of cell size	2.31E-02
174	GO:0015706: nitrate transport	2.31E-02
175	GO:0005983: starch catabolic process	2.31E-02
176	GO:0016024: CDP-diacylglycerol biosynthetic process	2.31E-02
177	GO:0009790: embryo development	2.43E-02
178	GO:0009637: response to blue light	2.52E-02
179	GO:2000028: regulation of photoperiodism, flowering	2.53E-02
180	GO:0009718: anthocyanin-containing compound biosynthetic process	2.53E-02
181	GO:0009725: response to hormone	2.53E-02
182	GO:0009767: photosynthetic electron transport chain	2.53E-02
183	GO:0010628: positive regulation of gene expression	2.53E-02
184	GO:0034599: cellular response to oxidative stress	2.64E-02
185	GO:0045454: cell redox homeostasis	2.73E-02
186	GO:0010143: cutin biosynthetic process	2.76E-02
187	GO:0009933: meristem structural organization	2.76E-02
188	GO:0030001: metal ion transport	2.88E-02
189	GO:0010030: positive regulation of seed germination	2.99E-02
190	GO:0010167: response to nitrate	2.99E-02
191	GO:0009451: RNA modification	3.08E-02
192	GO:0009744: response to sucrose	3.25E-02
193	GO:0005992: trehalose biosynthetic process	3.48E-02
194	GO:0019344: cysteine biosynthetic process	3.48E-02
195	GO:0009944: polarity specification of adaxial/abaxial axis	3.48E-02
196	GO:0000027: ribosomal large subunit assembly	3.48E-02
197	GO:0006418: tRNA aminoacylation for protein translation	3.73E-02
198	GO:0006810: transport	3.82E-02
199	GO:0048511: rhythmic process	3.99E-02
200	GO:0031408: oxylipin biosynthetic process	3.99E-02
201	GO:0009664: plant-type cell wall organization	4.08E-02
202	GO:0009814: defense response, incompatible interaction	4.26E-02
203	GO:0016226: iron-sulfur cluster assembly	4.26E-02
204	GO:0010017: red or far-red light signaling pathway	4.26E-02
205	GO:0006364: rRNA processing	4.38E-02
206	GO:0009585: red, far-red light phototransduction	4.38E-02
207	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.53E-02
208	GO:0006817: phosphate ion transport	4.80E-02
209	GO:0006284: base-excision repair	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
2	GO:0046905: phytoene synthase activity	0.00E+00
3	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
4	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
5	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
6	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
7	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	0.00E+00
8	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
9	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
10	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
11	GO:0008887: glycerate kinase activity	0.00E+00
12	GO:0045550: geranylgeranyl reductase activity	0.00E+00
13	GO:0009673: low-affinity phosphate transmembrane transporter activity	0.00E+00
14	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
15	GO:0046570: methylthioribulose 1-phosphate dehydratase activity	0.00E+00
16	GO:0043874: acireductone synthase activity	0.00E+00
17	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
18	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
19	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
20	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
21	GO:0019843: rRNA binding	1.80E-28
22	GO:0003735: structural constituent of ribosome	3.28E-17
23	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	5.89E-10
24	GO:0005528: FK506 binding	4.01E-08
25	GO:0016851: magnesium chelatase activity	1.06E-06
26	GO:0001053: plastid sigma factor activity	3.01E-06
27	GO:0016987: sigma factor activity	3.01E-06
28	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	1.67E-05
29	GO:0016168: chlorophyll binding	4.75E-05
30	GO:0004089: carbonate dehydratase activity	2.65E-04
31	GO:0008266: poly(U) RNA binding	3.14E-04
32	GO:0004130: cytochrome-c peroxidase activity	4.18E-04
33	GO:0031409: pigment binding	4.24E-04
34	GO:0051920: peroxiredoxin activity	5.54E-04
35	GO:0004853: uroporphyrinogen decarboxylase activity	6.22E-04
36	GO:0051996: squalene synthase activity	6.22E-04
37	GO:0045485: omega-6 fatty acid desaturase activity	6.22E-04
38	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	6.22E-04
39	GO:0046906: tetrapyrrole binding	6.22E-04
40	GO:0052638: indole-3-butyrate beta-glucosyltransferase activity	6.22E-04
41	GO:0004655: porphobilinogen synthase activity	6.22E-04
42	GO:0009671: nitrate:proton symporter activity	6.22E-04
43	GO:0019899: enzyme binding	7.10E-04
44	GO:0016209: antioxidant activity	8.83E-04
45	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.07E-03
46	GO:0008967: phosphoglycolate phosphatase activity	1.34E-03
47	GO:0047746: chlorophyllase activity	1.34E-03
48	GO:0042389: omega-3 fatty acid desaturase activity	1.34E-03
49	GO:0004618: phosphoglycerate kinase activity	1.34E-03
50	GO:0010297: heteropolysaccharide binding	1.34E-03
51	GO:0043425: bHLH transcription factor binding	1.34E-03
52	GO:0009977: proton motive force dependent protein transmembrane transporter activity	1.34E-03
53	GO:0004047: aminomethyltransferase activity	1.34E-03
54	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	1.34E-03
55	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.34E-03
56	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.34E-03
57	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	1.34E-03
58	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	2.20E-03
59	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.20E-03
60	GO:0010277: chlorophyllide a oxygenase [overall] activity	2.20E-03
61	GO:0050734: hydroxycinnamoyltransferase activity	2.20E-03
62	GO:0045548: phenylalanine ammonia-lyase activity	2.20E-03
63	GO:0002161: aminoacyl-tRNA editing activity	2.20E-03
64	GO:0031072: heat shock protein binding	2.68E-03
65	GO:0016787: hydrolase activity	3.16E-03
66	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	3.20E-03
67	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	3.20E-03
68	GO:0004375: glycine dehydrogenase (decarboxylating) activity	3.20E-03
69	GO:0035250: UDP-galactosyltransferase activity	3.20E-03
70	GO:0043495: protein anchor	4.32E-03
71	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	4.32E-03
72	GO:0046556: alpha-L-arabinofuranosidase activity	4.32E-03
73	GO:0004659: prenyltransferase activity	4.32E-03
74	GO:0004345: glucose-6-phosphate dehydrogenase activity	4.32E-03
75	GO:0009044: xylan 1,4-beta-xylosidase activity	4.32E-03
76	GO:0005253: anion channel activity	4.32E-03
77	GO:0004356: glutamate-ammonia ligase activity	5.55E-03
78	GO:0008725: DNA-3-methyladenine glycosylase activity	5.55E-03
79	GO:0016773: phosphotransferase activity, alcohol group as acceptor	5.55E-03
80	GO:0050661: NADP binding	5.57E-03
81	GO:0022891: substrate-specific transmembrane transporter activity	6.12E-03
82	GO:0030570: pectate lyase activity	6.12E-03
83	GO:0003756: protein disulfide isomerase activity	6.66E-03
84	GO:0042578: phosphoric ester hydrolase activity	6.88E-03
85	GO:0005247: voltage-gated chloride channel activity	6.88E-03
86	GO:0016688: L-ascorbate peroxidase activity	6.88E-03
87	GO:0051537: 2 iron, 2 sulfur cluster binding	7.21E-03
88	GO:0004559: alpha-mannosidase activity	8.32E-03
89	GO:0004017: adenylate kinase activity	8.32E-03
90	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	8.32E-03
91	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	8.32E-03
92	GO:0050662: coenzyme binding	9.08E-03
93	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	9.56E-03
94	GO:0004033: aldo-keto reductase (NADP) activity	1.15E-02
95	GO:0004564: beta-fructofuranosidase activity	1.15E-02
96	GO:0003723: RNA binding	1.68E-02
97	GO:0016844: strictosidine synthase activity	1.69E-02
98	GO:0015112: nitrate transmembrane transporter activity	1.69E-02
99	GO:0004575: sucrose alpha-glucosidase activity	1.69E-02
100	GO:0005381: iron ion transmembrane transporter activity	1.69E-02
101	GO:0004805: trehalose-phosphatase activity	1.89E-02
102	GO:0008236: serine-type peptidase activity	1.89E-02
103	GO:0004222: metalloendopeptidase activity	2.19E-02
104	GO:0000049: tRNA binding	2.31E-02
105	GO:0005315: inorganic phosphate transmembrane transporter activity	2.53E-02
106	GO:0008146: sulfotransferase activity	2.99E-02
107	GO:0051536: iron-sulfur cluster binding	3.48E-02
108	GO:0015293: symporter activity	3.66E-02
109	GO:0051287: NAD binding	3.93E-02
110	GO:0004176: ATP-dependent peptidase activity	3.99E-02
111	GO:0004707: MAP kinase activity	3.99E-02
112	GO:0003690: double-stranded DNA binding	4.53E-02
113	GO:0003727: single-stranded RNA binding	4.80E-02
114	GO:0045330: aspartyl esterase activity	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0044391: ribosomal subunit	0.00E+00
2	GO:0098572: stromal side of plastid thylakoid membrane	0.00E+00
3	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
4	GO:0009507: chloroplast	5.16E-96
5	GO:0009535: chloroplast thylakoid membrane	2.12E-60
6	GO:0009941: chloroplast envelope	3.68E-60
7	GO:0009570: chloroplast stroma	2.52E-56
8	GO:0009534: chloroplast thylakoid	8.73E-45
9	GO:0009579: thylakoid	3.21E-32
10	GO:0009543: chloroplast thylakoid lumen	1.80E-28
11	GO:0031977: thylakoid lumen	4.20E-18
12	GO:0005840: ribosome	1.22E-14
13	GO:0030095: chloroplast photosystem II	2.87E-14
14	GO:0010287: plastoglobule	1.74E-08
15	GO:0010319: stromule	8.22E-08
16	GO:0010007: magnesium chelatase complex	2.24E-07
17	GO:0000311: plastid large ribosomal subunit	2.78E-07
18	GO:0009533: chloroplast stromal thylakoid	5.58E-07
19	GO:0009523: photosystem II	6.79E-07
20	GO:0009706: chloroplast inner membrane	1.61E-06
21	GO:0009654: photosystem II oxygen evolving complex	2.01E-06
22	GO:0019898: extrinsic component of membrane	1.44E-05
23	GO:0031969: chloroplast membrane	1.73E-05
24	GO:0000312: plastid small ribosomal subunit	1.89E-05
25	GO:0048046: apoplast	2.66E-05
26	GO:0016020: membrane	2.73E-05
27	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	8.82E-05
28	GO:0009295: nucleoid	3.18E-04
29	GO:0042651: thylakoid membrane	5.54E-04
30	GO:0009344: nitrite reductase complex [NAD(P)H]	6.22E-04
31	GO:0009547: plastid ribosome	6.22E-04
32	GO:0009782: photosystem I antenna complex	6.22E-04
33	GO:0043674: columella	6.22E-04
34	GO:0009783: photosystem II antenna complex	6.22E-04
35	GO:0009515: granal stacked thylakoid	6.22E-04
36	GO:0015935: small ribosomal subunit	6.27E-04
37	GO:0015934: large ribosomal subunit	7.33E-04
38	GO:0009522: photosystem I	1.29E-03
39	GO:0080085: signal recognition particle, chloroplast targeting	1.34E-03
40	GO:0000427: plastid-encoded plastid RNA polymerase complex	1.34E-03
41	GO:0042170: plastid membrane	1.34E-03
42	GO:0033281: TAT protein transport complex	2.20E-03
43	GO:0032040: small-subunit processome	2.35E-03
44	GO:0030529: intracellular ribonucleoprotein complex	2.47E-03
45	GO:0009508: plastid chromosome	2.68E-03
46	GO:0009531: secondary cell wall	3.20E-03
47	GO:0005775: vacuolar lumen	3.20E-03
48	GO:0042646: plastid nucleoid	3.20E-03
49	GO:0005960: glycine cleavage complex	3.20E-03
50	GO:0030076: light-harvesting complex	3.40E-03
51	GO:0022626: cytosolic ribosome	3.49E-03
52	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	6.88E-03
53	GO:0034707: chloride channel complex	6.88E-03
54	GO:0005762: mitochondrial large ribosomal subunit	8.32E-03
55	GO:0016363: nuclear matrix	8.32E-03
56	GO:0042807: central vacuole	9.86E-03
57	GO:0009505: plant-type cell wall	1.14E-02
58	GO:0009538: photosystem I reaction center	1.15E-02
59	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.32E-02
60	GO:0005763: mitochondrial small ribosomal subunit	1.50E-02
61	GO:0042644: chloroplast nucleoid	1.50E-02
62	GO:0019013: viral nucleocapsid	2.53E-02
63	GO:0022627: cytosolic small ribosomal subunit	4.24E-02