co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G16830

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009991: response to extracellular stimulus	0.00E+00
2	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
3	GO:0000911: cytokinesis by cell plate formation	1.69E-05
4	GO:0030968: endoplasmic reticulum unfolded protein response	3.92E-05
5	GO:0034214: protein hexamerization	6.74E-05
6	GO:0048482: plant ovule morphogenesis	6.74E-05
7	GO:0000303: response to superoxide	6.74E-05
8	GO:0015969: guanosine tetraphosphate metabolic process	6.74E-05
9	GO:0010265: SCF complex assembly	6.74E-05
10	GO:1902265: abscisic acid homeostasis	6.74E-05
11	GO:0009867: jasmonic acid mediated signaling pathway	7.43E-05
12	GO:0051258: protein polymerization	1.62E-04
13	GO:0046777: protein autophosphorylation	1.75E-04
14	GO:0046621: negative regulation of organ growth	2.75E-04
15	GO:0006556: S-adenosylmethionine biosynthetic process	2.75E-04
16	GO:2000114: regulation of establishment of cell polarity	3.98E-04
17	GO:0051259: protein oligomerization	3.98E-04
18	GO:0006809: nitric oxide biosynthetic process	3.98E-04
19	GO:0072583: clathrin-dependent endocytosis	3.98E-04
20	GO:0009687: abscisic acid metabolic process	5.32E-04
21	GO:0042991: transcription factor import into nucleus	5.32E-04
22	GO:0009816: defense response to bacterium, incompatible interaction	7.08E-04
23	GO:0016567: protein ubiquitination	7.37E-04
24	GO:1900425: negative regulation of defense response to bacterium	8.23E-04
25	GO:0048317: seed morphogenesis	8.23E-04
26	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	8.23E-04
27	GO:0015937: coenzyme A biosynthetic process	1.14E-03
28	GO:0048366: leaf development	1.15E-03
29	GO:0048766: root hair initiation	1.32E-03
30	GO:0032875: regulation of DNA endoreduplication	1.32E-03
31	GO:0009819: drought recovery	1.32E-03
32	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.66E-03
33	GO:0090333: regulation of stomatal closure	1.69E-03
34	GO:0006813: potassium ion transport	1.85E-03
35	GO:2000280: regulation of root development	1.89E-03
36	GO:0008202: steroid metabolic process	1.89E-03
37	GO:0048268: clathrin coat assembly	1.89E-03
38	GO:0042742: defense response to bacterium	2.09E-03
39	GO:0043069: negative regulation of programmed cell death	2.10E-03
40	GO:0019538: protein metabolic process	2.10E-03
41	GO:0072593: reactive oxygen species metabolic process	2.31E-03
42	GO:0000266: mitochondrial fission	2.53E-03
43	GO:0012501: programmed cell death	2.53E-03
44	GO:0009873: ethylene-activated signaling pathway	2.75E-03
45	GO:0010102: lateral root morphogenesis	2.76E-03
46	GO:0055046: microgametogenesis	2.76E-03
47	GO:0009887: animal organ morphogenesis	2.99E-03
48	GO:0009825: multidimensional cell growth	3.23E-03
49	GO:0010030: positive regulation of seed germination	3.23E-03
50	GO:2000377: regulation of reactive oxygen species metabolic process	3.73E-03
51	GO:0009790: embryo development	3.79E-03
52	GO:0051260: protein homooligomerization	4.26E-03
53	GO:0006730: one-carbon metabolic process	4.53E-03
54	GO:0030433: ubiquitin-dependent ERAD pathway	4.53E-03
55	GO:0031348: negative regulation of defense response	4.53E-03
56	GO:0006468: protein phosphorylation	4.62E-03
57	GO:0009693: ethylene biosynthetic process	4.81E-03
58	GO:0071215: cellular response to abscisic acid stimulus	4.81E-03
59	GO:0009561: megagametogenesis	5.09E-03
60	GO:0010091: trichome branching	5.09E-03
61	GO:0006470: protein dephosphorylation	5.11E-03
62	GO:0007166: cell surface receptor signaling pathway	5.11E-03
63	GO:0042631: cellular response to water deprivation	5.68E-03
64	GO:0010051: xylem and phloem pattern formation	5.68E-03
65	GO:0010087: phloem or xylem histogenesis	5.68E-03
66	GO:0010154: fruit development	5.98E-03
67	GO:0042752: regulation of circadian rhythm	6.28E-03
68	GO:0048825: cotyledon development	6.60E-03
69	GO:0010193: response to ozone	6.91E-03
70	GO:0002229: defense response to oomycetes	6.91E-03
71	GO:0010583: response to cyclopentenone	7.24E-03
72	GO:0016032: viral process	7.24E-03
73	GO:0071281: cellular response to iron ion	7.57E-03
74	GO:0006464: cellular protein modification process	7.90E-03
75	GO:0006914: autophagy	7.90E-03
76	GO:0009723: response to ethylene	8.00E-03
77	GO:0006904: vesicle docking involved in exocytosis	8.24E-03
78	GO:0010286: heat acclimation	8.24E-03
79	GO:0071805: potassium ion transmembrane transport	8.24E-03
80	GO:0010200: response to chitin	8.87E-03
81	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	9.29E-03
82	GO:0048573: photoperiodism, flowering	1.00E-02
83	GO:0006950: response to stress	1.00E-02
84	GO:0009817: defense response to fungus, incompatible interaction	1.08E-02
85	GO:0050832: defense response to fungus	1.09E-02
86	GO:0010311: lateral root formation	1.11E-02
87	GO:0048527: lateral root development	1.19E-02
88	GO:0006397: mRNA processing	1.32E-02
89	GO:0048364: root development	1.32E-02
90	GO:0006887: exocytosis	1.44E-02
91	GO:0006897: endocytosis	1.44E-02
92	GO:0006631: fatty acid metabolic process	1.44E-02
93	GO:0000209: protein polyubiquitination	1.57E-02
94	GO:0042538: hyperosmotic salinity response	1.79E-02
95	GO:0009734: auxin-activated signaling pathway	1.79E-02
96	GO:0009736: cytokinin-activated signaling pathway	1.88E-02
97	GO:0051603: proteolysis involved in cellular protein catabolic process	1.93E-02
98	GO:0006417: regulation of translation	2.02E-02
99	GO:0048367: shoot system development	2.17E-02
100	GO:0035556: intracellular signal transduction	2.38E-02
101	GO:0006396: RNA processing	2.47E-02
102	GO:0051726: regulation of cell cycle	2.52E-02
103	GO:0009793: embryo development ending in seed dormancy	2.90E-02
104	GO:0009845: seed germination	3.00E-02
105	GO:0006633: fatty acid biosynthetic process	3.33E-02
106	GO:0040008: regulation of growth	3.45E-02
107	GO:0010150: leaf senescence	3.57E-02
108	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.86E-02
109	GO:0008380: RNA splicing	4.04E-02
110	GO:0006979: response to oxidative stress	4.58E-02
111	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	4.61E-02
112	GO:0006355: regulation of transcription, DNA-templated	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0033550: MAP kinase tyrosine phosphatase activity	0.00E+00
2	GO:0030276: clathrin binding	1.31E-05
3	GO:0005515: protein binding	3.88E-05
4	GO:0070008: serine-type exopeptidase activity	6.74E-05
5	GO:0030544: Hsp70 protein binding	6.74E-05
6	GO:0004674: protein serine/threonine kinase activity	1.17E-04
7	GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	1.62E-04
8	GO:0004594: pantothenate kinase activity	1.62E-04
9	GO:0008728: GTP diphosphokinase activity	1.62E-04
10	GO:0043130: ubiquitin binding	1.88E-04
11	GO:0043424: protein histidine kinase binding	2.09E-04
12	GO:0004478: methionine adenosyltransferase activity	2.75E-04
13	GO:0005524: ATP binding	2.84E-04
14	GO:0010294: abscisic acid glucosyltransferase activity	6.73E-04
15	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	6.73E-04
16	GO:0016301: kinase activity	8.55E-04
17	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	9.79E-04
18	GO:0102391: decanoate--CoA ligase activity	9.79E-04
19	GO:0003950: NAD+ ADP-ribosyltransferase activity	9.79E-04
20	GO:0004467: long-chain fatty acid-CoA ligase activity	1.14E-03
21	GO:0008142: oxysterol binding	1.50E-03
22	GO:0005545: 1-phosphatidylinositol binding	2.10E-03
23	GO:0004713: protein tyrosine kinase activity	2.10E-03
24	GO:0004521: endoribonuclease activity	2.53E-03
25	GO:0004725: protein tyrosine phosphatase activity	3.48E-03
26	GO:0015079: potassium ion transmembrane transporter activity	3.99E-03
27	GO:0005249: voltage-gated potassium channel activity	5.68E-03
28	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	7.57E-03
29	GO:0061630: ubiquitin protein ligase activity	9.02E-03
30	GO:0030247: polysaccharide binding	1.00E-02
31	GO:0008236: serine-type peptidase activity	1.04E-02
32	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.04E-02
33	GO:0004722: protein serine/threonine phosphatase activity	1.13E-02
34	GO:0003924: GTPase activity	1.27E-02
35	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.35E-02
36	GO:0031625: ubiquitin protein ligase binding	2.02E-02
37	GO:0000166: nucleotide binding	2.26E-02
38	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.26E-02
39	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.26E-02
40	GO:0016874: ligase activity	2.31E-02
41	GO:0030246: carbohydrate binding	3.04E-02
42	GO:0004252: serine-type endopeptidase activity	3.05E-02
43	GO:0008565: protein transporter activity	3.22E-02
44	GO:0005516: calmodulin binding	3.39E-02
45	GO:0008017: microtubule binding	3.68E-02
46	GO:0005525: GTP binding	3.71E-02
47	GO:0046872: metal ion binding	3.75E-02
48	GO:0008194: UDP-glycosyltransferase activity	3.86E-02
49	GO:0003723: RNA binding	4.53E-02
50	GO:0008168: methyltransferase activity	4.73E-02
51	GO:0046982: protein heterodimerization activity	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0045335: phagocytic vesicle	0.00E+00
2	GO:0005886: plasma membrane	9.40E-06
3	GO:0045334: clathrin-coated endocytic vesicle	6.74E-05
4	GO:0042406: extrinsic component of endoplasmic reticulum membrane	2.75E-04
5	GO:0030136: clathrin-coated vesicle	3.27E-04
6	GO:0008076: voltage-gated potassium channel complex	3.98E-04
7	GO:0070062: extracellular exosome	3.98E-04
8	GO:0031461: cullin-RING ubiquitin ligase complex	3.98E-04
9	GO:0005634: nucleus	9.39E-04
10	GO:0016363: nuclear matrix	9.79E-04
11	GO:0000794: condensed nuclear chromosome	1.14E-03
12	GO:0030131: clathrin adaptor complex	1.32E-03
13	GO:0005829: cytosol	1.44E-03
14	GO:0030665: clathrin-coated vesicle membrane	1.89E-03
15	GO:0009524: phragmoplast	3.43E-03
16	GO:0005905: clathrin-coated pit	4.26E-03
17	GO:0009504: cell plate	6.60E-03
18	GO:0000145: exocyst	7.24E-03
19	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	7.58E-03
20	GO:0030529: intracellular ribonucleoprotein complex	8.93E-03
21	GO:0000151: ubiquitin ligase complex	1.08E-02
22	GO:0000786: nucleosome	1.23E-02
23	GO:0005819: spindle	1.35E-02
24	GO:0005834: heterotrimeric G-protein complex	2.22E-02
25	GO:0005783: endoplasmic reticulum	3.86E-02
26	GO:0005737: cytoplasm	4.80E-02