co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G16290

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070125: mitochondrial translational elongation	0.00E+00
2	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
3	GO:0045038: protein import into chloroplast thylakoid membrane	2.41E-06
4	GO:0032544: plastid translation	1.32E-05
5	GO:0006426: glycyl-tRNA aminoacylation	3.37E-05
6	GO:0042371: vitamin K biosynthetic process	3.37E-05
7	GO:1902458: positive regulation of stomatal opening	3.37E-05
8	GO:1903426: regulation of reactive oxygen species biosynthetic process	8.48E-05
9	GO:0010275: NAD(P)H dehydrogenase complex assembly	8.48E-05
10	GO:0006954: inflammatory response	1.47E-04
11	GO:0006518: peptide metabolic process	1.47E-04
12	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	1.47E-04
13	GO:0010239: chloroplast mRNA processing	2.18E-04
14	GO:0016556: mRNA modification	2.18E-04
15	GO:0006808: regulation of nitrogen utilization	2.95E-04
16	GO:0009793: embryo development ending in seed dormancy	3.63E-04
17	GO:0010236: plastoquinone biosynthetic process	3.77E-04
18	GO:0042372: phylloquinone biosynthetic process	5.53E-04
19	GO:0006458: 'de novo' protein folding	5.53E-04
20	GO:0042026: protein refolding	5.53E-04
21	GO:1901259: chloroplast rRNA processing	5.53E-04
22	GO:0045995: regulation of embryonic development	6.47E-04
23	GO:0009772: photosynthetic electron transport in photosystem II	6.47E-04
24	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	6.47E-04
25	GO:2000070: regulation of response to water deprivation	7.44E-04
26	GO:0006353: DNA-templated transcription, termination	7.44E-04
27	GO:0009073: aromatic amino acid family biosynthetic process	1.28E-03
28	GO:0045037: protein import into chloroplast stroma	1.40E-03
29	GO:0006412: translation	1.51E-03
30	GO:0090351: seedling development	1.78E-03
31	GO:0061077: chaperone-mediated protein folding	2.33E-03
32	GO:0006730: one-carbon metabolic process	2.48E-03
33	GO:0009306: protein secretion	2.78E-03
34	GO:0042254: ribosome biogenesis	2.90E-03
35	GO:0016117: carotenoid biosynthetic process	2.94E-03
36	GO:0006814: sodium ion transport	3.42E-03
37	GO:0009853: photorespiration	6.82E-03
38	GO:0051707: response to other organism	8.14E-03
39	GO:0009737: response to abscisic acid	8.39E-03
40	GO:0006457: protein folding	1.19E-02
41	GO:0009790: embryo development	1.68E-02
42	GO:0015031: protein transport	2.38E-02
43	GO:0009658: chloroplast organization	2.58E-02
44	GO:0015979: photosynthesis	3.31E-02

Rank	GO Term	Adjusted P value
1	GO:0005048: signal sequence binding	0.00E+00
2	GO:0009974: zeinoxanthin epsilon hydroxylase activity	0.00E+00
3	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
4	GO:0019843: rRNA binding	8.54E-08
5	GO:0004820: glycine-tRNA ligase activity	3.37E-05
6	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	8.48E-05
7	GO:0009977: proton motive force dependent protein transmembrane transporter activity	8.48E-05
8	GO:0017150: tRNA dihydrouridine synthase activity	1.47E-04
9	GO:0008097: 5S rRNA binding	2.18E-04
10	GO:0008508: bile acid:sodium symporter activity	2.18E-04
11	GO:0003735: structural constituent of ribosome	2.73E-04
12	GO:0004659: prenyltransferase activity	2.95E-04
13	GO:0008312: 7S RNA binding	7.44E-04
14	GO:0044183: protein binding involved in protein folding	1.28E-03
15	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.65E-03
16	GO:0008080: N-acetyltransferase activity	3.25E-03
17	GO:0010181: FMN binding	3.42E-03
18	GO:0003729: mRNA binding	5.32E-03
19	GO:0004222: metalloendopeptidase activity	6.20E-03
20	GO:0003746: translation elongation factor activity	6.82E-03
21	GO:0016887: ATPase activity	8.02E-03
22	GO:0043621: protein self-association	8.60E-03
23	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	9.06E-03
24	GO:0051082: unfolded protein binding	1.28E-02
25	GO:0008565: protein transporter activity	1.71E-02
26	GO:0000287: magnesium ion binding	2.55E-02
27	GO:0050660: flavin adenine dinucleotide binding	2.87E-02
28	GO:0003924: GTPase activity	3.97E-02
29	GO:0009055: electron carrier activity	4.18E-02
30	GO:0004519: endonuclease activity	4.22E-02
31	GO:0003723: RNA binding	4.29E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.21E-18
2	GO:0009941: chloroplast envelope	7.15E-15
3	GO:0009570: chloroplast stroma	5.71E-10
4	GO:0000312: plastid small ribosomal subunit	4.82E-05
5	GO:0080085: signal recognition particle, chloroplast targeting	8.48E-05
6	GO:0033281: TAT protein transport complex	1.47E-04
7	GO:0009295: nucleoid	2.49E-04
8	GO:0009535: chloroplast thylakoid membrane	3.41E-04
9	GO:0015934: large ribosomal subunit	4.23E-04
10	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	8.45E-04
11	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	9.49E-04
12	GO:0009508: plastid chromosome	1.52E-03
13	GO:0005759: mitochondrial matrix	1.70E-03
14	GO:0022627: cytosolic small ribosomal subunit	2.45E-03
15	GO:0005840: ribosome	3.41E-03
16	GO:0009579: thylakoid	1.10E-02
17	GO:0009534: chloroplast thylakoid	1.11E-02
18	GO:0009706: chloroplast inner membrane	1.28E-02
19	GO:0009543: chloroplast thylakoid lumen	1.51E-02
20	GO:0005623: cell	1.54E-02
21	GO:0009536: plastid	2.29E-02
22	GO:0046658: anchored component of plasma membrane	2.31E-02
23	GO:0031969: chloroplast membrane	3.01E-02
24	GO:0043231: intracellular membrane-bounded organelle	4.26E-02