GO Enrichment Analysis of Co-expressed Genes with
AT3G16050
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051788: response to misfolded protein | 1.05E-07 |
| 2 | GO:0046686: response to cadmium ion | 2.87E-06 |
| 3 | GO:0043248: proteasome assembly | 5.05E-06 |
| 4 | GO:0006102: isocitrate metabolic process | 1.36E-05 |
| 5 | GO:0006099: tricarboxylic acid cycle | 2.84E-05 |
| 6 | GO:0010726: positive regulation of hydrogen peroxide metabolic process | 4.04E-05 |
| 7 | GO:0003400: regulation of COPII vesicle coating | 4.04E-05 |
| 8 | GO:0006390: transcription from mitochondrial promoter | 4.04E-05 |
| 9 | GO:0048455: stamen formation | 4.04E-05 |
| 10 | GO:0035266: meristem growth | 4.04E-05 |
| 11 | GO:0007292: female gamete generation | 4.04E-05 |
| 12 | GO:0051938: L-glutamate import | 4.04E-05 |
| 13 | GO:1990641: response to iron ion starvation | 4.04E-05 |
| 14 | GO:0007051: spindle organization | 1.00E-04 |
| 15 | GO:0006101: citrate metabolic process | 1.00E-04 |
| 16 | GO:0008535: respiratory chain complex IV assembly | 1.00E-04 |
| 17 | GO:0043091: L-arginine import | 1.00E-04 |
| 18 | GO:0060968: regulation of gene silencing | 1.73E-04 |
| 19 | GO:0072334: UDP-galactose transmembrane transport | 2.55E-04 |
| 20 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.13E-04 |
| 21 | GO:0006097: glyoxylate cycle | 4.37E-04 |
| 22 | GO:0007029: endoplasmic reticulum organization | 4.37E-04 |
| 23 | GO:0006405: RNA export from nucleus | 4.37E-04 |
| 24 | GO:0048767: root hair elongation | 4.81E-04 |
| 25 | GO:0006499: N-terminal protein myristoylation | 5.04E-04 |
| 26 | GO:0042176: regulation of protein catabolic process | 5.37E-04 |
| 27 | GO:0000060: protein import into nucleus, translocation | 5.37E-04 |
| 28 | GO:0006014: D-ribose metabolic process | 5.37E-04 |
| 29 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 5.37E-04 |
| 30 | GO:0010942: positive regulation of cell death | 5.37E-04 |
| 31 | GO:0006121: mitochondrial electron transport, succinate to ubiquinone | 5.37E-04 |
| 32 | GO:0048827: phyllome development | 5.37E-04 |
| 33 | GO:0048232: male gamete generation | 5.37E-04 |
| 34 | GO:0009853: photorespiration | 5.76E-04 |
| 35 | GO:0000082: G1/S transition of mitotic cell cycle | 7.49E-04 |
| 36 | GO:0042773: ATP synthesis coupled electron transport | 7.49E-04 |
| 37 | GO:0048528: post-embryonic root development | 7.49E-04 |
| 38 | GO:0010078: maintenance of root meristem identity | 8.61E-04 |
| 39 | GO:0009408: response to heat | 8.69E-04 |
| 40 | GO:0009809: lignin biosynthetic process | 9.76E-04 |
| 41 | GO:0009657: plastid organization | 9.77E-04 |
| 42 | GO:0048829: root cap development | 1.35E-03 |
| 43 | GO:0010015: root morphogenesis | 1.49E-03 |
| 44 | GO:0009933: meristem structural organization | 1.92E-03 |
| 45 | GO:0009266: response to temperature stimulus | 1.92E-03 |
| 46 | GO:0090351: seedling development | 2.07E-03 |
| 47 | GO:0010053: root epidermal cell differentiation | 2.07E-03 |
| 48 | GO:0007010: cytoskeleton organization | 2.39E-03 |
| 49 | GO:0006487: protein N-linked glycosylation | 2.39E-03 |
| 50 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.60E-03 |
| 51 | GO:0003333: amino acid transmembrane transport | 2.72E-03 |
| 52 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.89E-03 |
| 53 | GO:0009306: protein secretion | 3.24E-03 |
| 54 | GO:0051028: mRNA transport | 3.42E-03 |
| 55 | GO:0016117: carotenoid biosynthetic process | 3.42E-03 |
| 56 | GO:0008033: tRNA processing | 3.61E-03 |
| 57 | GO:0019252: starch biosynthetic process | 4.19E-03 |
| 58 | GO:0006979: response to oxidative stress | 4.35E-03 |
| 59 | GO:0080156: mitochondrial mRNA modification | 4.38E-03 |
| 60 | GO:0002229: defense response to oomycetes | 4.38E-03 |
| 61 | GO:0007264: small GTPase mediated signal transduction | 4.58E-03 |
| 62 | GO:0030163: protein catabolic process | 4.79E-03 |
| 63 | GO:0001666: response to hypoxia | 5.64E-03 |
| 64 | GO:0009615: response to virus | 5.64E-03 |
| 65 | GO:0010029: regulation of seed germination | 5.86E-03 |
| 66 | GO:0006974: cellular response to DNA damage stimulus | 6.09E-03 |
| 67 | GO:0032259: methylation | 6.23E-03 |
| 68 | GO:0006888: ER to Golgi vesicle-mediated transport | 6.31E-03 |
| 69 | GO:0048481: plant ovule development | 6.77E-03 |
| 70 | GO:0048364: root development | 6.78E-03 |
| 71 | GO:0006810: transport | 7.00E-03 |
| 72 | GO:0010311: lateral root formation | 7.01E-03 |
| 73 | GO:0010043: response to zinc ion | 7.49E-03 |
| 74 | GO:0045087: innate immune response | 7.99E-03 |
| 75 | GO:0006839: mitochondrial transport | 8.75E-03 |
| 76 | GO:0042542: response to hydrogen peroxide | 9.27E-03 |
| 77 | GO:0009744: response to sucrose | 9.53E-03 |
| 78 | GO:0009644: response to high light intensity | 1.01E-02 |
| 79 | GO:0009965: leaf morphogenesis | 1.03E-02 |
| 80 | GO:0006855: drug transmembrane transport | 1.06E-02 |
| 81 | GO:0042538: hyperosmotic salinity response | 1.12E-02 |
| 82 | GO:0006486: protein glycosylation | 1.18E-02 |
| 83 | GO:0009793: embryo development ending in seed dormancy | 1.25E-02 |
| 84 | GO:0006096: glycolytic process | 1.32E-02 |
| 85 | GO:0048367: shoot system development | 1.35E-02 |
| 86 | GO:0055114: oxidation-reduction process | 1.76E-02 |
| 87 | GO:0009845: seed germination | 1.87E-02 |
| 88 | GO:0009651: response to salt stress | 2.00E-02 |
| 89 | GO:0010150: leaf senescence | 2.22E-02 |
| 90 | GO:0010468: regulation of gene expression | 2.52E-02 |
| 91 | GO:0009733: response to auxin | 2.64E-02 |
| 92 | GO:0015031: protein transport | 2.98E-02 |
| 93 | GO:0009658: chloroplast organization | 3.04E-02 |
| 94 | GO:0009409: response to cold | 3.18E-02 |
| 95 | GO:0009860: pollen tube growth | 3.20E-02 |
| 96 | GO:0048366: leaf development | 3.41E-02 |
| 97 | GO:0010200: response to chitin | 3.63E-02 |
| 98 | GO:0016192: vesicle-mediated transport | 3.67E-02 |
| 99 | GO:0045454: cell redox homeostasis | 4.02E-02 |
| 100 | GO:0045892: negative regulation of transcription, DNA-templated | 4.07E-02 |
| 101 | GO:0016042: lipid catabolic process | 4.57E-02 |
| 102 | GO:0006629: lipid metabolic process | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004622: lysophospholipase activity | 0.00E+00 |
| 2 | GO:0003846: 2-acylglycerol O-acyltransferase activity | 0.00E+00 |
| 3 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.26E-05 |
| 4 | GO:0008171: O-methyltransferase activity | 3.31E-05 |
| 5 | GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity | 4.04E-05 |
| 6 | GO:0005090: Sar guanyl-nucleotide exchange factor activity | 4.04E-05 |
| 7 | GO:0090430: caffeoyl-CoA: alcohol caffeoyl transferase activity | 4.04E-05 |
| 8 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 1.00E-04 |
| 9 | GO:0048531: beta-1,3-galactosyltransferase activity | 1.00E-04 |
| 10 | GO:0018708: thiol S-methyltransferase activity | 1.00E-04 |
| 11 | GO:0015036: disulfide oxidoreductase activity | 1.00E-04 |
| 12 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 1.00E-04 |
| 13 | GO:0003994: aconitate hydratase activity | 1.00E-04 |
| 14 | GO:0010181: FMN binding | 2.10E-04 |
| 15 | GO:0001653: peptide receptor activity | 2.55E-04 |
| 16 | GO:0015181: arginine transmembrane transporter activity | 2.55E-04 |
| 17 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 2.55E-04 |
| 18 | GO:0015189: L-lysine transmembrane transporter activity | 2.55E-04 |
| 19 | GO:0008276: protein methyltransferase activity | 2.55E-04 |
| 20 | GO:0005313: L-glutamate transmembrane transporter activity | 3.43E-04 |
| 21 | GO:0016004: phospholipase activator activity | 3.43E-04 |
| 22 | GO:0009916: alternative oxidase activity | 3.43E-04 |
| 23 | GO:0004737: pyruvate decarboxylase activity | 3.43E-04 |
| 24 | GO:0005459: UDP-galactose transmembrane transporter activity | 4.37E-04 |
| 25 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 4.37E-04 |
| 26 | GO:0000104: succinate dehydrogenase activity | 4.37E-04 |
| 27 | GO:0005507: copper ion binding | 4.45E-04 |
| 28 | GO:0005096: GTPase activator activity | 4.81E-04 |
| 29 | GO:0031593: polyubiquitin binding | 5.37E-04 |
| 30 | GO:0036402: proteasome-activating ATPase activity | 5.37E-04 |
| 31 | GO:0030976: thiamine pyrophosphate binding | 5.37E-04 |
| 32 | GO:0004747: ribokinase activity | 6.40E-04 |
| 33 | GO:0051020: GTPase binding | 6.40E-04 |
| 34 | GO:0051920: peroxiredoxin activity | 6.40E-04 |
| 35 | GO:0016831: carboxy-lyase activity | 7.49E-04 |
| 36 | GO:0008865: fructokinase activity | 8.61E-04 |
| 37 | GO:0016209: antioxidant activity | 8.61E-04 |
| 38 | GO:0015174: basic amino acid transmembrane transporter activity | 1.22E-03 |
| 39 | GO:0030955: potassium ion binding | 1.22E-03 |
| 40 | GO:0004743: pyruvate kinase activity | 1.22E-03 |
| 41 | GO:0030234: enzyme regulator activity | 1.35E-03 |
| 42 | GO:0015114: phosphate ion transmembrane transporter activity | 1.77E-03 |
| 43 | GO:0016829: lyase activity | 1.83E-03 |
| 44 | GO:0017025: TBP-class protein binding | 2.07E-03 |
| 45 | GO:0051536: iron-sulfur cluster binding | 2.39E-03 |
| 46 | GO:0003954: NADH dehydrogenase activity | 2.39E-03 |
| 47 | GO:0005524: ATP binding | 3.30E-03 |
| 48 | GO:0000287: magnesium ion binding | 3.50E-03 |
| 49 | GO:0008536: Ran GTPase binding | 3.80E-03 |
| 50 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 4.38E-03 |
| 51 | GO:0005200: structural constituent of cytoskeleton | 5.21E-03 |
| 52 | GO:0016491: oxidoreductase activity | 6.10E-03 |
| 53 | GO:0015238: drug transmembrane transporter activity | 7.01E-03 |
| 54 | GO:0003697: single-stranded DNA binding | 7.99E-03 |
| 55 | GO:0043621: protein self-association | 1.01E-02 |
| 56 | GO:0016887: ATPase activity | 1.01E-02 |
| 57 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.01E-02 |
| 58 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.18E-02 |
| 59 | GO:0015171: amino acid transmembrane transporter activity | 1.26E-02 |
| 60 | GO:0045735: nutrient reservoir activity | 1.32E-02 |
| 61 | GO:0051082: unfolded protein binding | 1.51E-02 |
| 62 | GO:0005525: GTP binding | 1.91E-02 |
| 63 | GO:0015297: antiporter activity | 2.15E-02 |
| 64 | GO:0005215: transporter activity | 2.60E-02 |
| 65 | GO:0008168: methyltransferase activity | 2.95E-02 |
| 66 | GO:0004601: peroxidase activity | 3.04E-02 |
| 67 | GO:0003924: GTPase activity | 4.67E-02 |
| 68 | GO:0009055: electron carrier activity | 4.90E-02 |
| 69 | GO:0016787: hydrolase activity | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046862: chromoplast membrane | 0.00E+00 |
| 2 | GO:0000502: proteasome complex | 1.84E-06 |
| 3 | GO:0005829: cytosol | 6.09E-06 |
| 4 | GO:0008540: proteasome regulatory particle, base subcomplex | 2.74E-05 |
| 5 | GO:0034245: mitochondrial DNA-directed RNA polymerase complex | 4.04E-05 |
| 6 | GO:0030176: integral component of endoplasmic reticulum membrane | 7.15E-05 |
| 7 | GO:0031314: extrinsic component of mitochondrial inner membrane | 1.00E-04 |
| 8 | GO:0030089: phycobilisome | 1.00E-04 |
| 9 | GO:0045271: respiratory chain complex I | 1.02E-04 |
| 10 | GO:0005739: mitochondrion | 2.53E-04 |
| 11 | GO:0008250: oligosaccharyltransferase complex | 4.37E-04 |
| 12 | GO:0005798: Golgi-associated vesicle | 5.37E-04 |
| 13 | GO:0031597: cytosolic proteasome complex | 6.40E-04 |
| 14 | GO:0030173: integral component of Golgi membrane | 6.40E-04 |
| 15 | GO:0005886: plasma membrane | 6.81E-04 |
| 16 | GO:0031595: nuclear proteasome complex | 7.49E-04 |
| 17 | GO:0005743: mitochondrial inner membrane | 7.95E-04 |
| 18 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 8.61E-04 |
| 19 | GO:0031966: mitochondrial membrane | 9.12E-04 |
| 20 | GO:0005747: mitochondrial respiratory chain complex I | 1.18E-03 |
| 21 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.49E-03 |
| 22 | GO:0070469: respiratory chain | 2.55E-03 |
| 23 | GO:0009506: plasmodesma | 3.44E-03 |
| 24 | GO:0005783: endoplasmic reticulum | 3.81E-03 |
| 25 | GO:0005774: vacuolar membrane | 4.93E-03 |
| 26 | GO:0005618: cell wall | 6.05E-03 |
| 27 | GO:0005794: Golgi apparatus | 6.24E-03 |
| 28 | GO:0005643: nuclear pore | 6.77E-03 |
| 29 | GO:0016020: membrane | 7.51E-03 |
| 30 | GO:0005730: nucleolus | 8.38E-03 |
| 31 | GO:0005856: cytoskeleton | 1.03E-02 |
| 32 | GO:0005759: mitochondrial matrix | 2.08E-02 |
| 33 | GO:0046658: anchored component of plasma membrane | 2.72E-02 |
| 34 | GO:0005789: endoplasmic reticulum membrane | 3.58E-02 |