co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G15730

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
2	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
3	GO:0032780: negative regulation of ATPase activity	0.00E+00
4	GO:0048227: plasma membrane to endosome transport	0.00E+00
5	GO:0051603: proteolysis involved in cellular protein catabolic process	8.37E-06
6	GO:0006605: protein targeting	3.06E-05
7	GO:0048508: embryonic meristem development	6.74E-05
8	GO:0006805: xenobiotic metabolic process	6.74E-05
9	GO:0000303: response to superoxide	6.74E-05
10	GO:0080173: male-female gamete recognition during double fertilization	6.74E-05
11	GO:0034214: protein hexamerization	6.74E-05
12	GO:0000266: mitochondrial fission	9.94E-05
13	GO:1902000: homogentisate catabolic process	1.62E-04
14	GO:0097054: L-glutamate biosynthetic process	1.62E-04
15	GO:0031648: protein destabilization	1.62E-04
16	GO:0019521: D-gluconate metabolic process	1.62E-04
17	GO:0019374: galactolipid metabolic process	1.62E-04
18	GO:0009945: radial axis specification	1.62E-04
19	GO:0045454: cell redox homeostasis	2.12E-04
20	GO:0010359: regulation of anion channel activity	2.75E-04
21	GO:0061158: 3'-UTR-mediated mRNA destabilization	2.75E-04
22	GO:0009072: aromatic amino acid family metabolic process	2.75E-04
23	GO:0071786: endoplasmic reticulum tubular network organization	3.98E-04
24	GO:2000114: regulation of establishment of cell polarity	3.98E-04
25	GO:0006624: vacuolar protein processing	3.98E-04
26	GO:2001289: lipid X metabolic process	3.98E-04
27	GO:0006809: nitric oxide biosynthetic process	3.98E-04
28	GO:0072583: clathrin-dependent endocytosis	3.98E-04
29	GO:0006537: glutamate biosynthetic process	3.98E-04
30	GO:0006979: response to oxidative stress	4.23E-04
31	GO:0042991: transcription factor import into nucleus	5.32E-04
32	GO:0010188: response to microbial phytotoxin	5.32E-04
33	GO:0019676: ammonia assimilation cycle	5.32E-04
34	GO:0010363: regulation of plant-type hypersensitive response	5.32E-04
35	GO:0006464: cellular protein modification process	5.67E-04
36	GO:0030308: negative regulation of cell growth	6.73E-04
37	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	8.23E-04
38	GO:0006751: glutathione catabolic process	8.23E-04
39	GO:0070814: hydrogen sulfide biosynthetic process	8.23E-04
40	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	8.23E-04
41	GO:1902456: regulation of stomatal opening	8.23E-04
42	GO:0009651: response to salt stress	8.93E-04
43	GO:0009942: longitudinal axis specification	9.79E-04
44	GO:0000911: cytokinesis by cell plate formation	9.79E-04
45	GO:0009723: response to ethylene	1.12E-03
46	GO:0050790: regulation of catalytic activity	1.14E-03
47	GO:0006955: immune response	1.14E-03
48	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.14E-03
49	GO:0016559: peroxisome fission	1.32E-03
50	GO:0006644: phospholipid metabolic process	1.32E-03
51	GO:0009819: drought recovery	1.32E-03
52	GO:0048766: root hair initiation	1.32E-03
53	GO:0006098: pentose-phosphate shunt	1.69E-03
54	GO:0008202: steroid metabolic process	1.89E-03
55	GO:0000103: sulfate assimilation	2.10E-03
56	GO:0019538: protein metabolic process	2.10E-03
57	GO:0012501: programmed cell death	2.53E-03
58	GO:0010102: lateral root morphogenesis	2.76E-03
59	GO:0006508: proteolysis	2.98E-03
60	GO:0015031: protein transport	3.00E-03
61	GO:0034976: response to endoplasmic reticulum stress	3.48E-03
62	GO:2000377: regulation of reactive oxygen species metabolic process	3.73E-03
63	GO:0009738: abscisic acid-activated signaling pathway	3.94E-03
64	GO:0046686: response to cadmium ion	4.09E-03
65	GO:0030433: ubiquitin-dependent ERAD pathway	4.53E-03
66	GO:0007005: mitochondrion organization	4.53E-03
67	GO:0031348: negative regulation of defense response	4.53E-03
68	GO:0010091: trichome branching	5.09E-03
69	GO:0006470: protein dephosphorylation	5.11E-03
70	GO:0010051: xylem and phloem pattern formation	5.68E-03
71	GO:0042391: regulation of membrane potential	5.68E-03
72	GO:0006662: glycerol ether metabolic process	5.98E-03
73	GO:0048825: cotyledon development	6.60E-03
74	GO:0006623: protein targeting to vacuole	6.60E-03
75	GO:0010193: response to ozone	6.91E-03
76	GO:0016032: viral process	7.24E-03
77	GO:0007264: small GTPase mediated signal transduction	7.24E-03
78	GO:0010583: response to cyclopentenone	7.24E-03
79	GO:0006970: response to osmotic stress	7.44E-03
80	GO:0006914: autophagy	7.90E-03
81	GO:0051607: defense response to virus	8.59E-03
82	GO:0046777: protein autophosphorylation	9.17E-03
83	GO:0009816: defense response to bacterium, incompatible interaction	9.29E-03
84	GO:0006950: response to stress	1.00E-02
85	GO:0055114: oxidation-reduction process	1.05E-02
86	GO:0009407: toxin catabolic process	1.15E-02
87	GO:0010043: response to zinc ion	1.19E-02
88	GO:0007568: aging	1.19E-02
89	GO:0010119: regulation of stomatal movement	1.19E-02
90	GO:0009853: photorespiration	1.27E-02
91	GO:0009867: jasmonic acid mediated signaling pathway	1.27E-02
92	GO:0034599: cellular response to oxidative stress	1.31E-02
93	GO:0006631: fatty acid metabolic process	1.44E-02
94	GO:0051707: response to other organism	1.52E-02
95	GO:0009873: ethylene-activated signaling pathway	1.64E-02
96	GO:0009636: response to toxic substance	1.65E-02
97	GO:0009846: pollen germination	1.79E-02
98	GO:0009736: cytokinin-activated signaling pathway	1.88E-02
99	GO:0018105: peptidyl-serine phosphorylation	2.47E-02
100	GO:0009737: response to abscisic acid	2.62E-02
101	GO:0000398: mRNA splicing, via spliceosome	2.68E-02
102	GO:0009845: seed germination	3.00E-02
103	GO:0006511: ubiquitin-dependent protein catabolic process	3.06E-02
104	GO:0009790: embryo development	3.17E-02
105	GO:0006633: fatty acid biosynthetic process	3.33E-02
106	GO:0040008: regulation of growth	3.45E-02
107	GO:0010150: leaf senescence	3.57E-02
108	GO:0007623: circadian rhythm	3.57E-02
109	GO:0010228: vegetative to reproductive phase transition of meristem	3.68E-02
110	GO:0050832: defense response to fungus	3.95E-02
111	GO:0009414: response to water deprivation	4.44E-02

Rank	GO Term	Adjusted P value
1	GO:0042030: ATPase inhibitor activity	0.00E+00
2	GO:0016504: peptidase activator activity	0.00E+00
3	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
4	GO:0070577: lysine-acetylated histone binding	0.00E+00
5	GO:0015930: glutamate synthase activity	0.00E+00
6	GO:0004197: cysteine-type endopeptidase activity	2.08E-05
7	GO:0016041: glutamate synthase (ferredoxin) activity	6.74E-05
8	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	6.74E-05
9	GO:0019786: Atg8-specific protease activity	6.74E-05
10	GO:0019779: Atg8 activating enzyme activity	1.62E-04
11	GO:0003840: gamma-glutamyltransferase activity	2.75E-04
12	GO:0036374: glutathione hydrolase activity	2.75E-04
13	GO:0004781: sulfate adenylyltransferase (ATP) activity	2.75E-04
14	GO:0016805: dipeptidase activity	2.75E-04
15	GO:0005093: Rab GDP-dissociation inhibitor activity	2.75E-04
16	GO:0005047: signal recognition particle binding	2.75E-04
17	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	3.98E-04
18	GO:0019776: Atg8 ligase activity	5.32E-04
19	GO:0070628: proteasome binding	5.32E-04
20	GO:0016887: ATPase activity	5.90E-04
21	GO:0005496: steroid binding	6.73E-04
22	GO:0031386: protein tag	6.73E-04
23	GO:0051538: 3 iron, 4 sulfur cluster binding	6.73E-04
24	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	6.73E-04
25	GO:0036402: proteasome-activating ATPase activity	8.23E-04
26	GO:0031593: polyubiquitin binding	8.23E-04
27	GO:0005515: protein binding	8.51E-04
28	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	9.79E-04
29	GO:0102391: decanoate--CoA ligase activity	9.79E-04
30	GO:0003950: NAD+ ADP-ribosyltransferase activity	9.79E-04
31	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	9.79E-04
32	GO:0004620: phospholipase activity	1.14E-03
33	GO:0004467: long-chain fatty acid-CoA ligase activity	1.14E-03
34	GO:0008235: metalloexopeptidase activity	1.14E-03
35	GO:0008142: oxysterol binding	1.50E-03
36	GO:0047617: acyl-CoA hydrolase activity	1.89E-03
37	GO:0045309: protein phosphorylated amino acid binding	1.89E-03
38	GO:0003924: GTPase activity	1.99E-03
39	GO:0008234: cysteine-type peptidase activity	2.04E-03
40	GO:0019904: protein domain specific binding	2.31E-03
41	GO:0004177: aminopeptidase activity	2.31E-03
42	GO:0008794: arsenate reductase (glutaredoxin) activity	2.31E-03
43	GO:0015035: protein disulfide oxidoreductase activity	2.69E-03
44	GO:0004175: endopeptidase activity	2.99E-03
45	GO:0030552: cAMP binding	3.23E-03
46	GO:0030553: cGMP binding	3.23E-03
47	GO:0017025: TBP-class protein binding	3.23E-03
48	GO:0043424: protein histidine kinase binding	3.99E-03
49	GO:0005216: ion channel activity	3.99E-03
50	GO:0004298: threonine-type endopeptidase activity	4.26E-03
51	GO:0003727: single-stranded RNA binding	5.09E-03
52	GO:0003756: protein disulfide isomerase activity	5.09E-03
53	GO:0047134: protein-disulfide reductase activity	5.38E-03
54	GO:0005249: voltage-gated potassium channel activity	5.68E-03
55	GO:0030551: cyclic nucleotide binding	5.68E-03
56	GO:0030276: clathrin binding	5.98E-03
57	GO:0001085: RNA polymerase II transcription factor binding	5.98E-03
58	GO:0004791: thioredoxin-disulfide reductase activity	6.28E-03
59	GO:0016853: isomerase activity	6.28E-03
60	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	7.57E-03
61	GO:0005525: GTP binding	7.73E-03
62	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	8.24E-03
63	GO:0009931: calcium-dependent protein serine/threonine kinase activity	9.65E-03
64	GO:0004683: calmodulin-dependent protein kinase activity	1.00E-02
65	GO:0005096: GTPase activator activity	1.11E-02
66	GO:0004722: protein serine/threonine phosphatase activity	1.13E-02
67	GO:0030145: manganese ion binding	1.19E-02
68	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.19E-02
69	GO:0016491: oxidoreductase activity	1.43E-02
70	GO:0004364: glutathione transferase activity	1.48E-02
71	GO:0005198: structural molecule activity	1.65E-02
72	GO:0005524: ATP binding	2.17E-02
73	GO:0043565: sequence-specific DNA binding	2.45E-02
74	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.11E-02
75	GO:0005516: calmodulin binding	3.39E-02
76	GO:0008017: microtubule binding	3.68E-02
77	GO:0005509: calcium ion binding	4.20E-02
78	GO:0042802: identical protein binding	4.23E-02
79	GO:0004601: peroxidase activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005785: signal recognition particle receptor complex	0.00E+00
3	GO:0005829: cytosol	1.82E-08
4	GO:0005773: vacuole	2.62E-05
5	GO:0045334: clathrin-coated endocytic vesicle	6.74E-05
6	GO:0005764: lysosome	1.31E-04
7	GO:0005839: proteasome core complex	2.30E-04
8	GO:0030139: endocytic vesicle	2.75E-04
9	GO:0071782: endoplasmic reticulum tubular network	3.98E-04
10	GO:0005775: vacuolar lumen	3.98E-04
11	GO:0032585: multivesicular body membrane	3.98E-04
12	GO:0000323: lytic vacuole	3.98E-04
13	GO:0005776: autophagosome	5.32E-04
14	GO:0000164: protein phosphatase type 1 complex	6.73E-04
15	GO:0005777: peroxisome	8.91E-04
16	GO:0009570: chloroplast stroma	9.64E-04
17	GO:0031597: cytosolic proteasome complex	9.79E-04
18	GO:0016363: nuclear matrix	9.79E-04
19	GO:0031595: nuclear proteasome complex	1.14E-03
20	GO:0000421: autophagosome membrane	1.32E-03
21	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.32E-03
22	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.50E-03
23	GO:0031901: early endosome membrane	1.69E-03
24	GO:0005737: cytoplasm	1.75E-03
25	GO:0000502: proteasome complex	1.85E-03
26	GO:0030665: clathrin-coated vesicle membrane	1.89E-03
27	GO:0008540: proteasome regulatory particle, base subcomplex	1.89E-03
28	GO:0005635: nuclear envelope	1.97E-03
29	GO:0017119: Golgi transport complex	2.10E-03
30	GO:0005886: plasma membrane	2.60E-03
31	GO:0005623: cell	3.34E-03
32	GO:0009524: phragmoplast	3.43E-03
33	GO:0005769: early endosome	3.48E-03
34	GO:0005774: vacuolar membrane	3.68E-03
35	GO:0005783: endoplasmic reticulum	3.78E-03
36	GO:0045271: respiratory chain complex I	3.99E-03
37	GO:0005741: mitochondrial outer membrane	4.26E-03
38	GO:0031410: cytoplasmic vesicle	4.53E-03
39	GO:0005615: extracellular space	5.00E-03
40	GO:0009504: cell plate	6.60E-03
41	GO:0005778: peroxisomal membrane	8.24E-03
42	GO:0005874: microtubule	8.28E-03
43	GO:0005794: Golgi apparatus	8.54E-03
44	GO:0005768: endosome	8.80E-03
45	GO:0005788: endoplasmic reticulum lumen	9.29E-03
46	GO:0005667: transcription factor complex	9.65E-03
47	GO:0005819: spindle	1.35E-02
48	GO:0031902: late endosome membrane	1.44E-02
49	GO:0005887: integral component of plasma membrane	1.72E-02
50	GO:0031966: mitochondrial membrane	1.79E-02
51	GO:0010008: endosome membrane	2.17E-02
52	GO:0005747: mitochondrial respiratory chain complex I	2.17E-02
53	GO:0005802: trans-Golgi network	3.61E-02