co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G15352

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
2	GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	0.00E+00
3	GO:0070476: rRNA (guanine-N7)-methylation	0.00E+00
4	GO:0072722: response to amitrole	0.00E+00
5	GO:0034976: response to endoplasmic reticulum stress	4.13E-12
6	GO:0006457: protein folding	8.84E-11
7	GO:0046686: response to cadmium ion	2.83E-09
8	GO:0045454: cell redox homeostasis	1.11E-08
9	GO:0009617: response to bacterium	2.64E-06
10	GO:0006099: tricarboxylic acid cycle	6.84E-06
11	GO:0042742: defense response to bacterium	5.89E-05
12	GO:0009697: salicylic acid biosynthetic process	7.21E-05
13	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.45E-04
14	GO:0006102: isocitrate metabolic process	2.41E-04
15	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.57E-04
16	GO:0010421: hydrogen peroxide-mediated programmed cell death	2.57E-04
17	GO:0033306: phytol metabolic process	2.57E-04
18	GO:0050691: regulation of defense response to virus by host	2.57E-04
19	GO:0051775: response to redox state	2.57E-04
20	GO:0042964: thioredoxin reduction	2.57E-04
21	GO:0046244: salicylic acid catabolic process	2.57E-04
22	GO:0019276: UDP-N-acetylgalactosamine metabolic process	2.57E-04
23	GO:0034975: protein folding in endoplasmic reticulum	2.57E-04
24	GO:0051938: L-glutamate import	2.57E-04
25	GO:0006047: UDP-N-acetylglucosamine metabolic process	2.57E-04
26	GO:0015760: glucose-6-phosphate transport	2.57E-04
27	GO:1990641: response to iron ion starvation	2.57E-04
28	GO:0006979: response to oxidative stress	2.75E-04
29	GO:0030968: endoplasmic reticulum unfolded protein response	2.98E-04
30	GO:0009699: phenylpropanoid biosynthetic process	2.98E-04
31	GO:0009553: embryo sac development	4.33E-04
32	GO:0055114: oxidation-reduction process	4.95E-04
33	GO:0009627: systemic acquired resistance	5.45E-04
34	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	5.68E-04
35	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	5.68E-04
36	GO:0006101: citrate metabolic process	5.68E-04
37	GO:0044419: interspecies interaction between organisms	5.68E-04
38	GO:0015712: hexose phosphate transport	5.68E-04
39	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.68E-04
40	GO:0030003: cellular cation homeostasis	5.68E-04
41	GO:0008535: respiratory chain complex IV assembly	5.68E-04
42	GO:0043091: L-arginine import	5.68E-04
43	GO:0015802: basic amino acid transport	5.68E-04
44	GO:0009805: coumarin biosynthetic process	5.68E-04
45	GO:0015714: phosphoenolpyruvate transport	9.22E-04
46	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	9.22E-04
47	GO:0009062: fatty acid catabolic process	9.22E-04
48	GO:0055074: calcium ion homeostasis	9.22E-04
49	GO:0035436: triose phosphate transmembrane transport	9.22E-04
50	GO:0006011: UDP-glucose metabolic process	9.22E-04
51	GO:0010272: response to silver ion	9.22E-04
52	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	9.22E-04
53	GO:0045039: protein import into mitochondrial inner membrane	9.22E-04
54	GO:0072334: UDP-galactose transmembrane transport	1.32E-03
55	GO:0033014: tetrapyrrole biosynthetic process	1.32E-03
56	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.32E-03
57	GO:0002239: response to oomycetes	1.32E-03
58	GO:0016998: cell wall macromolecule catabolic process	1.39E-03
59	GO:0031348: negative regulation of defense response	1.52E-03
60	GO:0019748: secondary metabolic process	1.52E-03
61	GO:0009846: pollen germination	1.63E-03
62	GO:0000460: maturation of 5.8S rRNA	1.76E-03
63	GO:0051205: protein insertion into membrane	1.76E-03
64	GO:0015713: phosphoglycerate transport	1.76E-03
65	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	1.76E-03
66	GO:0010109: regulation of photosynthesis	1.76E-03
67	GO:0046345: abscisic acid catabolic process	1.76E-03
68	GO:0009306: protein secretion	1.80E-03
69	GO:0000304: response to singlet oxygen	2.25E-03
70	GO:0034052: positive regulation of plant-type hypersensitive response	2.25E-03
71	GO:0006097: glyoxylate cycle	2.25E-03
72	GO:0006461: protein complex assembly	2.25E-03
73	GO:0045116: protein neddylation	2.25E-03
74	GO:0048316: seed development	2.29E-03
75	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.77E-03
76	GO:0009643: photosynthetic acclimation	2.77E-03
77	GO:0010405: arabinogalactan protein metabolic process	2.77E-03
78	GO:0010256: endomembrane system organization	2.77E-03
79	GO:0000470: maturation of LSU-rRNA	2.77E-03
80	GO:0000302: response to reactive oxygen species	2.79E-03
81	GO:0042372: phylloquinone biosynthetic process	3.33E-03
82	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	3.33E-03
83	GO:1902074: response to salt	3.93E-03
84	GO:1900056: negative regulation of leaf senescence	3.93E-03
85	GO:0009615: response to virus	4.03E-03
86	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.56E-03
87	GO:0030091: protein repair	4.56E-03
88	GO:0006605: protein targeting	4.56E-03
89	GO:0009751: response to salicylic acid	4.96E-03
90	GO:0019430: removal of superoxide radicals	5.22E-03
91	GO:0010120: camalexin biosynthetic process	5.22E-03
92	GO:0009817: defense response to fungus, incompatible interaction	5.25E-03
93	GO:0009407: toxin catabolic process	5.79E-03
94	GO:0019432: triglyceride biosynthetic process	5.92E-03
95	GO:0006783: heme biosynthetic process	5.92E-03
96	GO:0010112: regulation of systemic acquired resistance	5.92E-03
97	GO:0015780: nucleotide-sugar transport	5.92E-03
98	GO:0098656: anion transmembrane transport	5.92E-03
99	GO:0046685: response to arsenic-containing substance	5.92E-03
100	GO:0048354: mucilage biosynthetic process involved in seed coat development	6.64E-03
101	GO:0010205: photoinhibition	6.64E-03
102	GO:0043067: regulation of programmed cell death	6.64E-03
103	GO:0007064: mitotic sister chromatid cohesion	7.40E-03
104	GO:0006032: chitin catabolic process	7.40E-03
105	GO:0009688: abscisic acid biosynthetic process	7.40E-03
106	GO:0006816: calcium ion transport	8.19E-03
107	GO:0009682: induced systemic resistance	8.19E-03
108	GO:0000272: polysaccharide catabolic process	8.19E-03
109	GO:0009744: response to sucrose	8.59E-03
110	GO:0006820: anion transport	9.00E-03
111	GO:0002213: defense response to insect	9.00E-03
112	GO:0006790: sulfur compound metabolic process	9.00E-03
113	GO:0009636: response to toxic substance	9.66E-03
114	GO:0010075: regulation of meristem growth	9.85E-03
115	GO:0006094: gluconeogenesis	9.85E-03
116	GO:0009735: response to cytokinin	1.06E-02
117	GO:0002237: response to molecule of bacterial origin	1.07E-02
118	GO:0009934: regulation of meristem structural organization	1.07E-02
119	GO:0006486: protein glycosylation	1.16E-02
120	GO:0070588: calcium ion transmembrane transport	1.16E-02
121	GO:0046854: phosphatidylinositol phosphorylation	1.16E-02
122	GO:0009555: pollen development	1.21E-02
123	GO:0000162: tryptophan biosynthetic process	1.25E-02
124	GO:0080147: root hair cell development	1.35E-02
125	GO:0009651: response to salt stress	1.35E-02
126	GO:0006096: glycolytic process	1.37E-02
127	GO:0006874: cellular calcium ion homeostasis	1.45E-02
128	GO:0009620: response to fungus	1.51E-02
129	GO:0003333: amino acid transmembrane transport	1.55E-02
130	GO:0009624: response to nematode	1.65E-02
131	GO:0007131: reciprocal meiotic recombination	1.65E-02
132	GO:0030433: ubiquitin-dependent ERAD pathway	1.65E-02
133	GO:0071456: cellular response to hypoxia	1.65E-02
134	GO:0010227: floral organ abscission	1.76E-02
135	GO:0010584: pollen exine formation	1.86E-02
136	GO:0032259: methylation	1.99E-02
137	GO:0008033: tRNA processing	2.09E-02
138	GO:0000413: protein peptidyl-prolyl isomerization	2.09E-02
139	GO:0010118: stomatal movement	2.09E-02
140	GO:0009408: response to heat	2.10E-02
141	GO:0010154: fruit development	2.20E-02
142	GO:0010197: polar nucleus fusion	2.20E-02
143	GO:0048868: pollen tube development	2.20E-02
144	GO:0009749: response to glucose	2.43E-02
145	GO:0009851: auxin biosynthetic process	2.43E-02
146	GO:0002229: defense response to oomycetes	2.56E-02
147	GO:0010193: response to ozone	2.56E-02
148	GO:0006635: fatty acid beta-oxidation	2.56E-02
149	GO:0080156: mitochondrial mRNA modification	2.56E-02
150	GO:0030163: protein catabolic process	2.80E-02
151	GO:0010150: leaf senescence	2.87E-02
152	GO:0010252: auxin homeostasis	2.93E-02
153	GO:0006464: cellular protein modification process	2.93E-02
154	GO:0009567: double fertilization forming a zygote and endosperm	2.93E-02
155	GO:0016126: sterol biosynthetic process	3.32E-02
156	GO:0015995: chlorophyll biosynthetic process	3.73E-02
157	GO:0016311: dephosphorylation	3.87E-02
158	GO:0016049: cell growth	3.87E-02
159	GO:0048527: lateral root development	4.45E-02
160	GO:0010043: response to zinc ion	4.45E-02
161	GO:0007568: aging	4.45E-02
162	GO:0006970: response to osmotic stress	4.75E-02
163	GO:0045087: innate immune response	4.75E-02
164	GO:0015031: protein transport	4.87E-02

Rank	GO Term	Adjusted P value
1	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
2	GO:0004631: phosphomevalonate kinase activity	0.00E+00
3	GO:0050220: prostaglandin-E synthase activity	0.00E+00
4	GO:0016435: rRNA (guanine) methyltransferase activity	0.00E+00
5	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
6	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	0.00E+00
7	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
8	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
9	GO:0003756: protein disulfide isomerase activity	4.32E-11
10	GO:0004775: succinate-CoA ligase (ADP-forming) activity	3.07E-06
11	GO:0004776: succinate-CoA ligase (GDP-forming) activity	3.07E-06
12	GO:0005507: copper ion binding	1.69E-05
13	GO:0005460: UDP-glucose transmembrane transporter activity	2.51E-05
14	GO:0005509: calcium ion binding	4.47E-05
15	GO:0051082: unfolded protein binding	5.44E-05
16	GO:0005459: UDP-galactose transmembrane transporter activity	7.21E-05
17	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	2.57E-04
18	GO:0048037: cofactor binding	2.57E-04
19	GO:0004325: ferrochelatase activity	2.57E-04
20	GO:0008909: isochorismate synthase activity	2.57E-04
21	GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity	2.57E-04
22	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.57E-04
23	GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity	2.57E-04
24	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	2.57E-04
25	GO:0008809: carnitine racemase activity	2.57E-04
26	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.57E-04
27	GO:0015036: disulfide oxidoreductase activity	5.68E-04
28	GO:0019781: NEDD8 activating enzyme activity	5.68E-04
29	GO:0043021: ribonucleoprotein complex binding	5.68E-04
30	GO:0003994: aconitate hydratase activity	5.68E-04
31	GO:0015152: glucose-6-phosphate transmembrane transporter activity	5.68E-04
32	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	8.93E-04
33	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	9.22E-04
34	GO:0004148: dihydrolipoyl dehydrogenase activity	9.22E-04
35	GO:0019003: GDP binding	9.22E-04
36	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	9.22E-04
37	GO:0071917: triose-phosphate transmembrane transporter activity	9.22E-04
38	GO:0000030: mannosyltransferase activity	9.22E-04
39	GO:0051539: 4 iron, 4 sulfur cluster binding	1.05E-03
40	GO:0015181: arginine transmembrane transporter activity	1.32E-03
41	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.32E-03
42	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.32E-03
43	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.32E-03
44	GO:0015189: L-lysine transmembrane transporter activity	1.32E-03
45	GO:0009055: electron carrier activity	1.33E-03
46	GO:0004298: threonine-type endopeptidase activity	1.39E-03
47	GO:0005313: L-glutamate transmembrane transporter activity	1.76E-03
48	GO:0004031: aldehyde oxidase activity	1.76E-03
49	GO:0050302: indole-3-acetaldehyde oxidase activity	1.76E-03
50	GO:0015120: phosphoglycerate transmembrane transporter activity	1.76E-03
51	GO:0008641: small protein activating enzyme activity	2.25E-03
52	GO:0005496: steroid binding	2.25E-03
53	GO:0010294: abscisic acid glucosyltransferase activity	2.25E-03
54	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.77E-03
55	GO:0030976: thiamine pyrophosphate binding	2.77E-03
56	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.77E-03
57	GO:0015035: protein disulfide oxidoreductase activity	2.89E-03
58	GO:0000166: nucleotide binding	3.22E-03
59	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.33E-03
60	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.33E-03
61	GO:0005261: cation channel activity	3.33E-03
62	GO:0004144: diacylglycerol O-acyltransferase activity	3.33E-03
63	GO:0004656: procollagen-proline 4-dioxygenase activity	3.33E-03
64	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	3.33E-03
65	GO:0051920: peroxiredoxin activity	3.33E-03
66	GO:0008320: protein transmembrane transporter activity	3.93E-03
67	GO:0051213: dioxygenase activity	4.03E-03
68	GO:0015288: porin activity	4.56E-03
69	GO:0016209: antioxidant activity	4.56E-03
70	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.99E-03
71	GO:0008308: voltage-gated anion channel activity	5.22E-03
72	GO:0008135: translation factor activity, RNA binding	5.22E-03
73	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	5.25E-03
74	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	6.07E-03
75	GO:0050897: cobalt ion binding	6.07E-03
76	GO:0015174: basic amino acid transmembrane transporter activity	6.64E-03
77	GO:0045309: protein phosphorylated amino acid binding	6.64E-03
78	GO:0030955: potassium ion binding	6.64E-03
79	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	6.64E-03
80	GO:0004743: pyruvate kinase activity	6.64E-03
81	GO:0003746: translation elongation factor activity	6.65E-03
82	GO:0004568: chitinase activity	7.40E-03
83	GO:0008171: O-methyltransferase activity	7.40E-03
84	GO:0005525: GTP binding	7.69E-03
85	GO:0004129: cytochrome-c oxidase activity	8.19E-03
86	GO:0019904: protein domain specific binding	8.19E-03
87	GO:0004364: glutathione transferase activity	8.25E-03
88	GO:0008378: galactosyltransferase activity	9.00E-03
89	GO:0005388: calcium-transporting ATPase activity	9.85E-03
90	GO:0004022: alcohol dehydrogenase (NAD) activity	9.85E-03
91	GO:0005315: inorganic phosphate transmembrane transporter activity	9.85E-03
92	GO:0005262: calcium channel activity	9.85E-03
93	GO:0051287: NAD binding	1.04E-02
94	GO:0008061: chitin binding	1.16E-02
95	GO:0004970: ionotropic glutamate receptor activity	1.16E-02
96	GO:0005217: intracellular ligand-gated ion channel activity	1.16E-02
97	GO:0004190: aspartic-type endopeptidase activity	1.16E-02
98	GO:0050660: flavin adenine dinucleotide binding	1.17E-02
99	GO:0008233: peptidase activity	1.25E-02
100	GO:0051536: iron-sulfur cluster binding	1.35E-02
101	GO:0031418: L-ascorbic acid binding	1.35E-02
102	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.51E-02
103	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.51E-02
104	GO:0016779: nucleotidyltransferase activity	1.65E-02
105	GO:0030246: carbohydrate binding	1.89E-02
106	GO:0016758: transferase activity, transferring hexosyl groups	2.02E-02
107	GO:0010181: FMN binding	2.32E-02
108	GO:0004791: thioredoxin-disulfide reductase activity	2.32E-02
109	GO:0016853: isomerase activity	2.32E-02
110	GO:0048038: quinone binding	2.56E-02
111	GO:0008137: NADH dehydrogenase (ubiquinone) activity	2.56E-02
112	GO:0015297: antiporter activity	2.74E-02
113	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.80E-02
114	GO:0008194: UDP-glycosyltransferase activity	3.20E-02
115	GO:0030247: polysaccharide binding	3.73E-02
116	GO:0015238: drug transmembrane transporter activity	4.16E-02
117	GO:0008168: methyltransferase activity	4.26E-02
118	GO:0000287: magnesium ion binding	4.34E-02
119	GO:0016301: kinase activity	4.67E-02
120	GO:0003697: single-stranded DNA binding	4.75E-02
121	GO:0000987: core promoter proximal region sequence-specific DNA binding	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0005783: endoplasmic reticulum	5.42E-15
3	GO:0005788: endoplasmic reticulum lumen	7.39E-15
4	GO:0005774: vacuolar membrane	1.49E-05
5	GO:0005829: cytosol	4.49E-05
6	GO:0005886: plasma membrane	2.04E-04
7	GO:0045252: oxoglutarate dehydrogenase complex	2.57E-04
8	GO:0019773: proteasome core complex, alpha-subunit complex	2.98E-04
9	GO:0009507: chloroplast	4.96E-04
10	GO:0070545: PeBoW complex	5.68E-04
11	GO:0031314: extrinsic component of mitochondrial inner membrane	5.68E-04
12	GO:0030134: ER to Golgi transport vesicle	5.68E-04
13	GO:0005739: mitochondrion	6.21E-04
14	GO:0005789: endoplasmic reticulum membrane	7.78E-04
15	GO:0005759: mitochondrial matrix	9.06E-04
16	GO:0030176: integral component of endoplasmic reticulum membrane	9.38E-04
17	GO:0005839: proteasome core complex	1.39E-03
18	GO:0030660: Golgi-associated vesicle membrane	1.76E-03
19	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.76E-03
20	GO:0005746: mitochondrial respiratory chain	2.25E-03
21	GO:0005773: vacuole	2.31E-03
22	GO:0005834: heterotrimeric G-protein complex	2.39E-03
23	GO:0005801: cis-Golgi network	3.33E-03
24	GO:0030173: integral component of Golgi membrane	3.33E-03
25	GO:0030687: preribosome, large subunit precursor	3.93E-03
26	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	4.56E-03
27	GO:0000326: protein storage vacuole	5.22E-03
28	GO:0046930: pore complex	5.22E-03
29	GO:0005740: mitochondrial envelope	7.40E-03
30	GO:0005765: lysosomal membrane	8.19E-03
31	GO:0000502: proteasome complex	1.16E-02
32	GO:0031969: chloroplast membrane	1.28E-02
33	GO:0005747: mitochondrial respiratory chain complex I	1.42E-02
34	GO:0005777: peroxisome	1.49E-02
35	GO:0005741: mitochondrial outer membrane	1.55E-02
36	GO:0009536: plastid	1.57E-02
37	GO:0048046: apoplast	1.60E-02
38	GO:0009505: plant-type cell wall	1.63E-02
39	GO:0016020: membrane	1.71E-02
40	GO:0005743: mitochondrial inner membrane	1.92E-02
41	GO:0005623: cell	2.13E-02
42	GO:0043231: intracellular membrane-bounded organelle	2.37E-02
43	GO:0016592: mediator complex	2.68E-02
44	GO:0005794: Golgi apparatus	2.80E-02
45	GO:0016021: integral component of membrane	4.25E-02
46	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.84E-02