GO Enrichment Analysis of Co-expressed Genes with
AT3G15110
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 2 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 3 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 4 | GO:0046322: negative regulation of fatty acid oxidation | 0.00E+00 |
| 5 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.29E-06 |
| 6 | GO:0010206: photosystem II repair | 1.19E-05 |
| 7 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.67E-05 |
| 8 | GO:0000481: maturation of 5S rRNA | 2.68E-04 |
| 9 | GO:2000021: regulation of ion homeostasis | 2.68E-04 |
| 10 | GO:0010028: xanthophyll cycle | 2.68E-04 |
| 11 | GO:0034337: RNA folding | 2.68E-04 |
| 12 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 2.68E-04 |
| 13 | GO:0000476: maturation of 4.5S rRNA | 2.68E-04 |
| 14 | GO:0000967: rRNA 5'-end processing | 2.68E-04 |
| 15 | GO:0043266: regulation of potassium ion transport | 2.68E-04 |
| 16 | GO:0010480: microsporocyte differentiation | 2.68E-04 |
| 17 | GO:0031338: regulation of vesicle fusion | 2.68E-04 |
| 18 | GO:1900865: chloroplast RNA modification | 4.50E-04 |
| 19 | GO:0016122: xanthophyll metabolic process | 5.89E-04 |
| 20 | GO:0010270: photosystem II oxygen evolving complex assembly | 5.89E-04 |
| 21 | GO:0034470: ncRNA processing | 5.89E-04 |
| 22 | GO:0055129: L-proline biosynthetic process | 5.89E-04 |
| 23 | GO:0019388: galactose catabolic process | 5.89E-04 |
| 24 | GO:1900871: chloroplast mRNA modification | 5.89E-04 |
| 25 | GO:0009767: photosynthetic electron transport chain | 7.86E-04 |
| 26 | GO:0006810: transport | 8.06E-04 |
| 27 | GO:0045493: xylan catabolic process | 9.55E-04 |
| 28 | GO:0090630: activation of GTPase activity | 9.55E-04 |
| 29 | GO:2001295: malonyl-CoA biosynthetic process | 9.55E-04 |
| 30 | GO:0006518: peptide metabolic process | 9.55E-04 |
| 31 | GO:1901562: response to paraquat | 9.55E-04 |
| 32 | GO:0046836: glycolipid transport | 1.36E-03 |
| 33 | GO:0080170: hydrogen peroxide transmembrane transport | 1.36E-03 |
| 34 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.36E-03 |
| 35 | GO:0009226: nucleotide-sugar biosynthetic process | 1.36E-03 |
| 36 | GO:1901332: negative regulation of lateral root development | 1.36E-03 |
| 37 | GO:0009590: detection of gravity | 1.36E-03 |
| 38 | GO:0061077: chaperone-mediated protein folding | 1.46E-03 |
| 39 | GO:0045727: positive regulation of translation | 1.83E-03 |
| 40 | GO:0015994: chlorophyll metabolic process | 1.83E-03 |
| 41 | GO:0000413: protein peptidyl-prolyl isomerization | 2.21E-03 |
| 42 | GO:0006461: protein complex assembly | 2.33E-03 |
| 43 | GO:0009107: lipoate biosynthetic process | 2.33E-03 |
| 44 | GO:0006465: signal peptide processing | 2.33E-03 |
| 45 | GO:0016120: carotene biosynthetic process | 2.33E-03 |
| 46 | GO:0000304: response to singlet oxygen | 2.33E-03 |
| 47 | GO:0019252: starch biosynthetic process | 2.75E-03 |
| 48 | GO:0005975: carbohydrate metabolic process | 2.75E-03 |
| 49 | GO:0006561: proline biosynthetic process | 2.88E-03 |
| 50 | GO:0006751: glutathione catabolic process | 2.88E-03 |
| 51 | GO:0042549: photosystem II stabilization | 2.88E-03 |
| 52 | GO:0016554: cytidine to uridine editing | 2.88E-03 |
| 53 | GO:0006828: manganese ion transport | 2.88E-03 |
| 54 | GO:0010190: cytochrome b6f complex assembly | 2.88E-03 |
| 55 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 2.88E-03 |
| 56 | GO:0048437: floral organ development | 4.08E-03 |
| 57 | GO:0010196: nonphotochemical quenching | 4.08E-03 |
| 58 | GO:0009645: response to low light intensity stimulus | 4.08E-03 |
| 59 | GO:0010492: maintenance of shoot apical meristem identity | 4.73E-03 |
| 60 | GO:0005978: glycogen biosynthetic process | 4.73E-03 |
| 61 | GO:0032508: DNA duplex unwinding | 4.73E-03 |
| 62 | GO:0015995: chlorophyll biosynthetic process | 5.00E-03 |
| 63 | GO:0006633: fatty acid biosynthetic process | 5.30E-03 |
| 64 | GO:0032544: plastid translation | 5.42E-03 |
| 65 | GO:0071482: cellular response to light stimulus | 5.42E-03 |
| 66 | GO:0009657: plastid organization | 5.42E-03 |
| 67 | GO:0006526: arginine biosynthetic process | 5.42E-03 |
| 68 | GO:0048507: meristem development | 6.14E-03 |
| 69 | GO:0008152: metabolic process | 6.38E-03 |
| 70 | GO:0009409: response to cold | 6.73E-03 |
| 71 | GO:0005982: starch metabolic process | 6.90E-03 |
| 72 | GO:0006779: porphyrin-containing compound biosynthetic process | 6.90E-03 |
| 73 | GO:0034599: cellular response to oxidative stress | 7.34E-03 |
| 74 | GO:0045036: protein targeting to chloroplast | 7.68E-03 |
| 75 | GO:0006782: protoporphyrinogen IX biosynthetic process | 7.68E-03 |
| 76 | GO:0006535: cysteine biosynthetic process from serine | 7.68E-03 |
| 77 | GO:0048229: gametophyte development | 8.50E-03 |
| 78 | GO:0009684: indoleacetic acid biosynthetic process | 8.50E-03 |
| 79 | GO:0046856: phosphatidylinositol dephosphorylation | 8.50E-03 |
| 80 | GO:0006816: calcium ion transport | 8.50E-03 |
| 81 | GO:0009773: photosynthetic electron transport in photosystem I | 8.50E-03 |
| 82 | GO:0019684: photosynthesis, light reaction | 8.50E-03 |
| 83 | GO:1903507: negative regulation of nucleic acid-templated transcription | 8.50E-03 |
| 84 | GO:0046686: response to cadmium ion | 8.85E-03 |
| 85 | GO:0009644: response to high light intensity | 9.81E-03 |
| 86 | GO:0006006: glucose metabolic process | 1.02E-02 |
| 87 | GO:0010075: regulation of meristem growth | 1.02E-02 |
| 88 | GO:0009934: regulation of meristem structural organization | 1.11E-02 |
| 89 | GO:0042538: hyperosmotic salinity response | 1.14E-02 |
| 90 | GO:0010030: positive regulation of seed germination | 1.21E-02 |
| 91 | GO:0006364: rRNA processing | 1.22E-02 |
| 92 | GO:0006833: water transport | 1.30E-02 |
| 93 | GO:0019344: cysteine biosynthetic process | 1.40E-02 |
| 94 | GO:0007010: cytoskeleton organization | 1.40E-02 |
| 95 | GO:0016575: histone deacetylation | 1.50E-02 |
| 96 | GO:0007017: microtubule-based process | 1.50E-02 |
| 97 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.50E-02 |
| 98 | GO:0010431: seed maturation | 1.61E-02 |
| 99 | GO:0031408: oxylipin biosynthetic process | 1.61E-02 |
| 100 | GO:0035428: hexose transmembrane transport | 1.71E-02 |
| 101 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.71E-02 |
| 102 | GO:0006012: galactose metabolic process | 1.82E-02 |
| 103 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.05E-02 |
| 104 | GO:0032259: methylation | 2.13E-02 |
| 105 | GO:0034220: ion transmembrane transport | 2.17E-02 |
| 106 | GO:0048653: anther development | 2.17E-02 |
| 107 | GO:0042631: cellular response to water deprivation | 2.17E-02 |
| 108 | GO:0048868: pollen tube development | 2.29E-02 |
| 109 | GO:0046323: glucose import | 2.29E-02 |
| 110 | GO:0006520: cellular amino acid metabolic process | 2.29E-02 |
| 111 | GO:0006662: glycerol ether metabolic process | 2.29E-02 |
| 112 | GO:0042744: hydrogen peroxide catabolic process | 2.49E-02 |
| 113 | GO:0009791: post-embryonic development | 2.53E-02 |
| 114 | GO:0080156: mitochondrial mRNA modification | 2.65E-02 |
| 115 | GO:0002229: defense response to oomycetes | 2.65E-02 |
| 116 | GO:0000302: response to reactive oxygen species | 2.65E-02 |
| 117 | GO:1901657: glycosyl compound metabolic process | 2.91E-02 |
| 118 | GO:0030163: protein catabolic process | 2.91E-02 |
| 119 | GO:0006464: cellular protein modification process | 3.04E-02 |
| 120 | GO:0010027: thylakoid membrane organization | 3.45E-02 |
| 121 | GO:0009816: defense response to bacterium, incompatible interaction | 3.59E-02 |
| 122 | GO:0009414: response to water deprivation | 3.60E-02 |
| 123 | GO:0055114: oxidation-reduction process | 3.87E-02 |
| 124 | GO:0010411: xyloglucan metabolic process | 3.88E-02 |
| 125 | GO:0018298: protein-chromophore linkage | 4.17E-02 |
| 126 | GO:0009817: defense response to fungus, incompatible interaction | 4.17E-02 |
| 127 | GO:0009737: response to abscisic acid | 4.32E-02 |
| 128 | GO:0010311: lateral root formation | 4.32E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 2 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 3 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 4 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 5 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 6 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 7 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 8 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 9 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 10 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 11 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 12 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.17E-08 |
| 13 | GO:0005528: FK506 binding | 5.09E-08 |
| 14 | GO:0051861: glycolipid binding | 4.83E-05 |
| 15 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.83E-05 |
| 16 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.53E-04 |
| 17 | GO:0004033: aldo-keto reductase (NADP) activity | 2.55E-04 |
| 18 | GO:0030941: chloroplast targeting sequence binding | 2.68E-04 |
| 19 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 2.68E-04 |
| 20 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 2.68E-04 |
| 21 | GO:0004349: glutamate 5-kinase activity | 2.68E-04 |
| 22 | GO:0004350: glutamate-5-semialdehyde dehydrogenase activity | 2.68E-04 |
| 23 | GO:0003867: 4-aminobutyrate transaminase activity | 2.68E-04 |
| 24 | GO:0050017: L-3-cyanoalanine synthase activity | 5.89E-04 |
| 25 | GO:0017118: lipoyltransferase activity | 5.89E-04 |
| 26 | GO:0016868: intramolecular transferase activity, phosphotransferases | 5.89E-04 |
| 27 | GO:0003839: gamma-glutamylcyclotransferase activity | 5.89E-04 |
| 28 | GO:0016415: octanoyltransferase activity | 5.89E-04 |
| 29 | GO:0033201: alpha-1,4-glucan synthase activity | 5.89E-04 |
| 30 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 5.89E-04 |
| 31 | GO:0004614: phosphoglucomutase activity | 5.89E-04 |
| 32 | GO:0004802: transketolase activity | 5.89E-04 |
| 33 | GO:0004565: beta-galactosidase activity | 7.86E-04 |
| 34 | GO:0030267: glyoxylate reductase (NADP) activity | 9.55E-04 |
| 35 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 9.55E-04 |
| 36 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 9.55E-04 |
| 37 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 9.55E-04 |
| 38 | GO:0004373: glycogen (starch) synthase activity | 9.55E-04 |
| 39 | GO:0004075: biotin carboxylase activity | 9.55E-04 |
| 40 | GO:0004751: ribose-5-phosphate isomerase activity | 9.55E-04 |
| 41 | GO:0017089: glycolipid transporter activity | 1.36E-03 |
| 42 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 1.36E-03 |
| 43 | GO:0048487: beta-tubulin binding | 1.36E-03 |
| 44 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.83E-03 |
| 45 | GO:0016836: hydro-lyase activity | 1.83E-03 |
| 46 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.83E-03 |
| 47 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.83E-03 |
| 48 | GO:0009011: starch synthase activity | 1.83E-03 |
| 49 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.83E-03 |
| 50 | GO:0016787: hydrolase activity | 1.98E-03 |
| 51 | GO:0003989: acetyl-CoA carboxylase activity | 2.33E-03 |
| 52 | GO:0017137: Rab GTPase binding | 2.33E-03 |
| 53 | GO:0004040: amidase activity | 2.33E-03 |
| 54 | GO:0008200: ion channel inhibitor activity | 2.88E-03 |
| 55 | GO:0004130: cytochrome-c peroxidase activity | 2.88E-03 |
| 56 | GO:0042578: phosphoric ester hydrolase activity | 2.88E-03 |
| 57 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 2.88E-03 |
| 58 | GO:0048038: quinone binding | 2.94E-03 |
| 59 | GO:0004124: cysteine synthase activity | 3.46E-03 |
| 60 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 3.46E-03 |
| 61 | GO:0004034: aldose 1-epimerase activity | 4.73E-03 |
| 62 | GO:0043022: ribosome binding | 4.73E-03 |
| 63 | GO:0004721: phosphoprotein phosphatase activity | 5.00E-03 |
| 64 | GO:0008236: serine-type peptidase activity | 5.26E-03 |
| 65 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 5.42E-03 |
| 66 | GO:0004222: metalloendopeptidase activity | 6.11E-03 |
| 67 | GO:0047617: acyl-CoA hydrolase activity | 6.90E-03 |
| 68 | GO:0005384: manganese ion transmembrane transporter activity | 6.90E-03 |
| 69 | GO:0044183: protein binding involved in protein folding | 8.50E-03 |
| 70 | GO:0008378: galactosyltransferase activity | 9.35E-03 |
| 71 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 9.35E-03 |
| 72 | GO:0008168: methyltransferase activity | 9.94E-03 |
| 73 | GO:0015095: magnesium ion transmembrane transporter activity | 1.02E-02 |
| 74 | GO:0031072: heat shock protein binding | 1.02E-02 |
| 75 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.02E-02 |
| 76 | GO:0016788: hydrolase activity, acting on ester bonds | 1.07E-02 |
| 77 | GO:0008266: poly(U) RNA binding | 1.11E-02 |
| 78 | GO:0031409: pigment binding | 1.30E-02 |
| 79 | GO:0004407: histone deacetylase activity | 1.40E-02 |
| 80 | GO:0003714: transcription corepressor activity | 1.40E-02 |
| 81 | GO:0043424: protein histidine kinase binding | 1.50E-02 |
| 82 | GO:0033612: receptor serine/threonine kinase binding | 1.61E-02 |
| 83 | GO:0003756: protein disulfide isomerase activity | 1.94E-02 |
| 84 | GO:0047134: protein-disulfide reductase activity | 2.05E-02 |
| 85 | GO:0004791: thioredoxin-disulfide reductase activity | 2.41E-02 |
| 86 | GO:0016853: isomerase activity | 2.41E-02 |
| 87 | GO:0005355: glucose transmembrane transporter activity | 2.41E-02 |
| 88 | GO:0050662: coenzyme binding | 2.41E-02 |
| 89 | GO:0004252: serine-type endopeptidase activity | 2.43E-02 |
| 90 | GO:0004519: endonuclease activity | 2.49E-02 |
| 91 | GO:0019901: protein kinase binding | 2.53E-02 |
| 92 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.91E-02 |
| 93 | GO:0005200: structural constituent of cytoskeleton | 3.18E-02 |
| 94 | GO:0015250: water channel activity | 3.45E-02 |
| 95 | GO:0016168: chlorophyll binding | 3.59E-02 |
| 96 | GO:0102483: scopolin beta-glucosidase activity | 3.88E-02 |
| 97 | GO:0005096: GTPase activator activity | 4.32E-02 |
| 98 | GO:0015238: drug transmembrane transporter activity | 4.32E-02 |
| 99 | GO:0004601: peroxidase activity | 4.66E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.82E-42 |
| 3 | GO:0009543: chloroplast thylakoid lumen | 1.58E-20 |
| 4 | GO:0009534: chloroplast thylakoid | 1.58E-19 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 4.57E-16 |
| 6 | GO:0009570: chloroplast stroma | 5.55E-16 |
| 7 | GO:0031977: thylakoid lumen | 5.88E-15 |
| 8 | GO:0009941: chloroplast envelope | 5.80E-11 |
| 9 | GO:0009579: thylakoid | 1.20E-08 |
| 10 | GO:0030095: chloroplast photosystem II | 1.28E-06 |
| 11 | GO:0009533: chloroplast stromal thylakoid | 3.90E-06 |
| 12 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.19E-05 |
| 13 | GO:0031969: chloroplast membrane | 1.18E-04 |
| 14 | GO:0009782: photosystem I antenna complex | 2.68E-04 |
| 15 | GO:0010287: plastoglobule | 6.41E-04 |
| 16 | GO:0009654: photosystem II oxygen evolving complex | 1.33E-03 |
| 17 | GO:0042651: thylakoid membrane | 1.33E-03 |
| 18 | GO:0048046: apoplast | 2.59E-03 |
| 19 | GO:0019898: extrinsic component of membrane | 2.75E-03 |
| 20 | GO:0031359: integral component of chloroplast outer membrane | 4.08E-03 |
| 21 | GO:0009501: amyloplast | 4.73E-03 |
| 22 | GO:0009707: chloroplast outer membrane | 5.54E-03 |
| 23 | GO:0045298: tubulin complex | 6.14E-03 |
| 24 | GO:0032040: small-subunit processome | 9.35E-03 |
| 25 | GO:0009508: plastid chromosome | 1.02E-02 |
| 26 | GO:0030076: light-harvesting complex | 1.21E-02 |
| 27 | GO:0043234: protein complex | 1.30E-02 |
| 28 | GO:0009505: plant-type cell wall | 1.78E-02 |
| 29 | GO:0009523: photosystem II | 2.53E-02 |
| 30 | GO:0016592: mediator complex | 2.78E-02 |
| 31 | GO:0010319: stromule | 3.18E-02 |
| 32 | GO:0009295: nucleoid | 3.18E-02 |