GO Enrichment Analysis of Co-expressed Genes with
AT3G14770
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 2 | GO:0018160: peptidyl-pyrromethane cofactor linkage | 0.00E+00 |
| 3 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 4 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 5 | GO:0006223: uracil salvage | 0.00E+00 |
| 6 | GO:0060416: response to growth hormone | 0.00E+00 |
| 7 | GO:0032544: plastid translation | 7.23E-10 |
| 8 | GO:0006412: translation | 1.17E-09 |
| 9 | GO:0042254: ribosome biogenesis | 2.44E-09 |
| 10 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.80E-09 |
| 11 | GO:0015995: chlorophyll biosynthetic process | 9.91E-08 |
| 12 | GO:0006783: heme biosynthetic process | 1.59E-07 |
| 13 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.65E-05 |
| 14 | GO:0042372: phylloquinone biosynthetic process | 1.56E-04 |
| 15 | GO:0015979: photosynthesis | 1.66E-04 |
| 16 | GO:0010444: guard mother cell differentiation | 2.04E-04 |
| 17 | GO:1904964: positive regulation of phytol biosynthetic process | 2.70E-04 |
| 18 | GO:0042371: vitamin K biosynthetic process | 2.70E-04 |
| 19 | GO:0046520: sphingoid biosynthetic process | 2.70E-04 |
| 20 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.70E-04 |
| 21 | GO:0010442: guard cell morphogenesis | 2.70E-04 |
| 22 | GO:0009932: cell tip growth | 3.19E-04 |
| 23 | GO:0010583: response to cyclopentenone | 3.47E-04 |
| 24 | GO:0009658: chloroplast organization | 4.56E-04 |
| 25 | GO:0080148: negative regulation of response to water deprivation | 5.94E-04 |
| 26 | GO:0006529: asparagine biosynthetic process | 5.94E-04 |
| 27 | GO:0006568: tryptophan metabolic process | 5.94E-04 |
| 28 | GO:2000123: positive regulation of stomatal complex development | 5.94E-04 |
| 29 | GO:0052541: plant-type cell wall cellulose metabolic process | 5.94E-04 |
| 30 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 5.94E-04 |
| 31 | GO:0070981: L-asparagine biosynthetic process | 5.94E-04 |
| 32 | GO:0045454: cell redox homeostasis | 9.17E-04 |
| 33 | GO:0006760: folic acid-containing compound metabolic process | 9.62E-04 |
| 34 | GO:0015714: phosphoenolpyruvate transport | 9.62E-04 |
| 35 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 9.62E-04 |
| 36 | GO:0015840: urea transport | 9.62E-04 |
| 37 | GO:0006518: peptide metabolic process | 9.62E-04 |
| 38 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 1.38E-03 |
| 39 | GO:2001141: regulation of RNA biosynthetic process | 1.38E-03 |
| 40 | GO:0006241: CTP biosynthetic process | 1.38E-03 |
| 41 | GO:0006165: nucleoside diphosphate phosphorylation | 1.38E-03 |
| 42 | GO:0006228: UTP biosynthetic process | 1.38E-03 |
| 43 | GO:0006183: GTP biosynthetic process | 1.84E-03 |
| 44 | GO:0015713: phosphoglycerate transport | 1.84E-03 |
| 45 | GO:0044206: UMP salvage | 1.84E-03 |
| 46 | GO:0006749: glutathione metabolic process | 1.84E-03 |
| 47 | GO:2000038: regulation of stomatal complex development | 1.84E-03 |
| 48 | GO:0046656: folic acid biosynthetic process | 1.84E-03 |
| 49 | GO:0006021: inositol biosynthetic process | 1.84E-03 |
| 50 | GO:0006564: L-serine biosynthetic process | 2.35E-03 |
| 51 | GO:0010236: plastoquinone biosynthetic process | 2.35E-03 |
| 52 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.35E-03 |
| 53 | GO:0016123: xanthophyll biosynthetic process | 2.35E-03 |
| 54 | GO:0010375: stomatal complex patterning | 2.35E-03 |
| 55 | GO:0043097: pyrimidine nucleoside salvage | 2.35E-03 |
| 56 | GO:0006206: pyrimidine nucleobase metabolic process | 2.90E-03 |
| 57 | GO:0007035: vacuolar acidification | 2.90E-03 |
| 58 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.90E-03 |
| 59 | GO:0046855: inositol phosphate dephosphorylation | 2.90E-03 |
| 60 | GO:0009117: nucleotide metabolic process | 2.90E-03 |
| 61 | GO:0009735: response to cytokinin | 3.09E-03 |
| 62 | GO:0032502: developmental process | 3.18E-03 |
| 63 | GO:0046654: tetrahydrofolate biosynthetic process | 3.49E-03 |
| 64 | GO:0009854: oxidative photosynthetic carbon pathway | 3.49E-03 |
| 65 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 3.49E-03 |
| 66 | GO:0009955: adaxial/abaxial pattern specification | 3.49E-03 |
| 67 | GO:1901259: chloroplast rRNA processing | 3.49E-03 |
| 68 | GO:0007267: cell-cell signaling | 3.83E-03 |
| 69 | GO:0009610: response to symbiotic fungus | 4.12E-03 |
| 70 | GO:0009772: photosynthetic electron transport in photosystem II | 4.12E-03 |
| 71 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 4.12E-03 |
| 72 | GO:0050829: defense response to Gram-negative bacterium | 4.12E-03 |
| 73 | GO:0010027: thylakoid membrane organization | 4.30E-03 |
| 74 | GO:0009704: de-etiolation | 4.77E-03 |
| 75 | GO:0007155: cell adhesion | 4.77E-03 |
| 76 | GO:0042255: ribosome assembly | 4.77E-03 |
| 77 | GO:0006605: protein targeting | 4.77E-03 |
| 78 | GO:0071482: cellular response to light stimulus | 5.47E-03 |
| 79 | GO:0009657: plastid organization | 5.47E-03 |
| 80 | GO:0040008: regulation of growth | 5.73E-03 |
| 81 | GO:0000160: phosphorelay signal transduction system | 5.89E-03 |
| 82 | GO:0009245: lipid A biosynthetic process | 6.20E-03 |
| 83 | GO:0010205: photoinhibition | 6.96E-03 |
| 84 | GO:0019538: protein metabolic process | 7.75E-03 |
| 85 | GO:0006535: cysteine biosynthetic process from serine | 7.75E-03 |
| 86 | GO:0048765: root hair cell differentiation | 8.58E-03 |
| 87 | GO:0006415: translational termination | 8.58E-03 |
| 88 | GO:0009073: aromatic amino acid family biosynthetic process | 8.58E-03 |
| 89 | GO:0043085: positive regulation of catalytic activity | 8.58E-03 |
| 90 | GO:0006352: DNA-templated transcription, initiation | 8.58E-03 |
| 91 | GO:0006790: sulfur compound metabolic process | 9.44E-03 |
| 92 | GO:0016024: CDP-diacylglycerol biosynthetic process | 9.44E-03 |
| 93 | GO:0050826: response to freezing | 1.03E-02 |
| 94 | GO:0009725: response to hormone | 1.03E-02 |
| 95 | GO:0009691: cytokinin biosynthetic process | 1.03E-02 |
| 96 | GO:0006541: glutamine metabolic process | 1.12E-02 |
| 97 | GO:0010207: photosystem II assembly | 1.12E-02 |
| 98 | GO:0007049: cell cycle | 1.22E-02 |
| 99 | GO:0046854: phosphatidylinositol phosphorylation | 1.22E-02 |
| 100 | GO:0010053: root epidermal cell differentiation | 1.22E-02 |
| 101 | GO:0019853: L-ascorbic acid biosynthetic process | 1.22E-02 |
| 102 | GO:0009736: cytokinin-activated signaling pathway | 1.24E-02 |
| 103 | GO:0006071: glycerol metabolic process | 1.32E-02 |
| 104 | GO:0006833: water transport | 1.32E-02 |
| 105 | GO:0019762: glucosinolate catabolic process | 1.32E-02 |
| 106 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.32E-02 |
| 107 | GO:0006487: protein N-linked glycosylation | 1.42E-02 |
| 108 | GO:0019344: cysteine biosynthetic process | 1.42E-02 |
| 109 | GO:0009116: nucleoside metabolic process | 1.42E-02 |
| 110 | GO:0000027: ribosomal large subunit assembly | 1.42E-02 |
| 111 | GO:0010026: trichome differentiation | 1.52E-02 |
| 112 | GO:0015992: proton transport | 1.62E-02 |
| 113 | GO:0019915: lipid storage | 1.62E-02 |
| 114 | GO:0061077: chaperone-mediated protein folding | 1.62E-02 |
| 115 | GO:0031408: oxylipin biosynthetic process | 1.62E-02 |
| 116 | GO:0009411: response to UV | 1.84E-02 |
| 117 | GO:0051726: regulation of cell cycle | 1.88E-02 |
| 118 | GO:0009306: protein secretion | 1.95E-02 |
| 119 | GO:0019722: calcium-mediated signaling | 1.95E-02 |
| 120 | GO:0042127: regulation of cell proliferation | 1.95E-02 |
| 121 | GO:0016117: carotenoid biosynthetic process | 2.07E-02 |
| 122 | GO:0008033: tRNA processing | 2.19E-02 |
| 123 | GO:0042335: cuticle development | 2.19E-02 |
| 124 | GO:0006662: glycerol ether metabolic process | 2.31E-02 |
| 125 | GO:0009741: response to brassinosteroid | 2.31E-02 |
| 126 | GO:0009646: response to absence of light | 2.43E-02 |
| 127 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 2.68E-02 |
| 128 | GO:0006633: fatty acid biosynthetic process | 2.79E-02 |
| 129 | GO:1901657: glycosyl compound metabolic process | 2.94E-02 |
| 130 | GO:0009567: double fertilization forming a zygote and endosperm | 3.07E-02 |
| 131 | GO:0008380: RNA splicing | 3.65E-02 |
| 132 | GO:0009627: systemic acquired resistance | 3.77E-02 |
| 133 | GO:0016311: dephosphorylation | 4.06E-02 |
| 134 | GO:0018298: protein-chromophore linkage | 4.21E-02 |
| 135 | GO:0009407: toxin catabolic process | 4.51E-02 |
| 136 | GO:0048527: lateral root development | 4.66E-02 |
| 137 | GO:0009637: response to blue light | 4.97E-02 |
| 138 | GO:0009853: photorespiration | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 2 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 3 | GO:0005048: signal sequence binding | 0.00E+00 |
| 4 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 5 | GO:0004853: uroporphyrinogen decarboxylase activity | 0.00E+00 |
| 6 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 7 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 8 | GO:0004418: hydroxymethylbilane synthase activity | 0.00E+00 |
| 9 | GO:0003735: structural constituent of ribosome | 3.07E-11 |
| 10 | GO:0019843: rRNA binding | 1.28E-09 |
| 11 | GO:0008794: arsenate reductase (glutaredoxin) activity | 2.77E-05 |
| 12 | GO:0015035: protein disulfide oxidoreductase activity | 6.72E-05 |
| 13 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.99E-04 |
| 14 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 2.70E-04 |
| 15 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 2.70E-04 |
| 16 | GO:0000170: sphingosine hydroxylase activity | 2.70E-04 |
| 17 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 2.70E-04 |
| 18 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 2.70E-04 |
| 19 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 2.70E-04 |
| 20 | GO:0015121: phosphoenolpyruvate:phosphate antiporter activity | 2.70E-04 |
| 21 | GO:0004655: porphobilinogen synthase activity | 2.70E-04 |
| 22 | GO:0004071: aspartate-ammonia ligase activity | 2.70E-04 |
| 23 | GO:0009374: biotin binding | 2.70E-04 |
| 24 | GO:0015200: methylammonium transmembrane transporter activity | 2.70E-04 |
| 25 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 4.43E-04 |
| 26 | GO:0010291: carotene beta-ring hydroxylase activity | 5.94E-04 |
| 27 | GO:0004617: phosphoglycerate dehydrogenase activity | 5.94E-04 |
| 28 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 5.94E-04 |
| 29 | GO:0052832: inositol monophosphate 3-phosphatase activity | 5.94E-04 |
| 30 | GO:0042284: sphingolipid delta-4 desaturase activity | 5.94E-04 |
| 31 | GO:0008934: inositol monophosphate 1-phosphatase activity | 5.94E-04 |
| 32 | GO:0052833: inositol monophosphate 4-phosphatase activity | 5.94E-04 |
| 33 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 5.94E-04 |
| 34 | GO:0004150: dihydroneopterin aldolase activity | 5.94E-04 |
| 35 | GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups | 9.62E-04 |
| 36 | GO:0004148: dihydrolipoyl dehydrogenase activity | 9.62E-04 |
| 37 | GO:0005528: FK506 binding | 1.23E-03 |
| 38 | GO:0004550: nucleoside diphosphate kinase activity | 1.38E-03 |
| 39 | GO:0008097: 5S rRNA binding | 1.38E-03 |
| 40 | GO:0035529: NADH pyrophosphatase activity | 1.38E-03 |
| 41 | GO:0016149: translation release factor activity, codon specific | 1.38E-03 |
| 42 | GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 1.38E-03 |
| 43 | GO:0009055: electron carrier activity | 1.49E-03 |
| 44 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.61E-03 |
| 45 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 1.84E-03 |
| 46 | GO:0015204: urea transmembrane transporter activity | 1.84E-03 |
| 47 | GO:0015120: phosphoglycerate transmembrane transporter activity | 1.84E-03 |
| 48 | GO:0004659: prenyltransferase activity | 1.84E-03 |
| 49 | GO:0001053: plastid sigma factor activity | 1.84E-03 |
| 50 | GO:0004845: uracil phosphoribosyltransferase activity | 1.84E-03 |
| 51 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.84E-03 |
| 52 | GO:0016987: sigma factor activity | 1.84E-03 |
| 53 | GO:0043495: protein anchor | 1.84E-03 |
| 54 | GO:0003989: acetyl-CoA carboxylase activity | 2.35E-03 |
| 55 | GO:0052622: ATP dimethylallyltransferase activity | 2.35E-03 |
| 56 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.35E-03 |
| 57 | GO:0004040: amidase activity | 2.35E-03 |
| 58 | GO:0052623: ADP dimethylallyltransferase activity | 2.35E-03 |
| 59 | GO:0019901: protein kinase binding | 2.79E-03 |
| 60 | GO:0009824: AMP dimethylallyltransferase activity | 2.90E-03 |
| 61 | GO:0008519: ammonium transmembrane transporter activity | 2.90E-03 |
| 62 | GO:0031177: phosphopantetheine binding | 2.90E-03 |
| 63 | GO:0016208: AMP binding | 2.90E-03 |
| 64 | GO:0016462: pyrophosphatase activity | 2.90E-03 |
| 65 | GO:0000156: phosphorelay response regulator activity | 3.39E-03 |
| 66 | GO:0004124: cysteine synthase activity | 3.49E-03 |
| 67 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.49E-03 |
| 68 | GO:0004849: uridine kinase activity | 3.49E-03 |
| 69 | GO:0000035: acyl binding | 3.49E-03 |
| 70 | GO:0016597: amino acid binding | 4.06E-03 |
| 71 | GO:0019899: enzyme binding | 4.12E-03 |
| 72 | GO:0008312: 7S RNA binding | 4.77E-03 |
| 73 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 4.77E-03 |
| 74 | GO:0102483: scopolin beta-glucosidase activity | 5.06E-03 |
| 75 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 5.47E-03 |
| 76 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 6.19E-03 |
| 77 | GO:0003747: translation release factor activity | 6.20E-03 |
| 78 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 6.20E-03 |
| 79 | GO:0008047: enzyme activator activity | 7.75E-03 |
| 80 | GO:0008422: beta-glucosidase activity | 7.77E-03 |
| 81 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 8.58E-03 |
| 82 | GO:0043424: protein histidine kinase binding | 1.52E-02 |
| 83 | GO:0004650: polygalacturonase activity | 1.62E-02 |
| 84 | GO:0022891: substrate-specific transmembrane transporter activity | 1.84E-02 |
| 85 | GO:0003727: single-stranded RNA binding | 1.95E-02 |
| 86 | GO:0008514: organic anion transmembrane transporter activity | 1.95E-02 |
| 87 | GO:0016491: oxidoreductase activity | 1.99E-02 |
| 88 | GO:0047134: protein-disulfide reductase activity | 2.07E-02 |
| 89 | GO:0005507: copper ion binding | 2.27E-02 |
| 90 | GO:0004791: thioredoxin-disulfide reductase activity | 2.43E-02 |
| 91 | GO:0010181: FMN binding | 2.43E-02 |
| 92 | GO:0030170: pyridoxal phosphate binding | 2.46E-02 |
| 93 | GO:0015297: antiporter activity | 2.92E-02 |
| 94 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.94E-02 |
| 95 | GO:0008483: transaminase activity | 3.21E-02 |
| 96 | GO:0015250: water channel activity | 3.48E-02 |
| 97 | GO:0016168: chlorophyll binding | 3.63E-02 |
| 98 | GO:0008375: acetylglucosaminyltransferase activity | 3.77E-02 |
| 99 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.21E-02 |
| 100 | GO:0004222: metalloendopeptidase activity | 4.51E-02 |
| 101 | GO:0004601: peroxidase activity | 4.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 9.10E-34 |
| 3 | GO:0009570: chloroplast stroma | 4.32E-31 |
| 4 | GO:0009941: chloroplast envelope | 8.72E-20 |
| 5 | GO:0005840: ribosome | 1.65E-13 |
| 6 | GO:0009579: thylakoid | 8.18E-11 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 2.96E-08 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 4.77E-08 |
| 9 | GO:0031977: thylakoid lumen | 5.16E-07 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 3.56E-06 |
| 11 | GO:0031969: chloroplast membrane | 1.53E-05 |
| 12 | GO:0031225: anchored component of membrane | 3.02E-05 |
| 13 | GO:0009505: plant-type cell wall | 1.52E-04 |
| 14 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 2.70E-04 |
| 15 | GO:0019898: extrinsic component of membrane | 2.90E-04 |
| 16 | GO:0009536: plastid | 5.38E-04 |
| 17 | GO:0080085: signal recognition particle, chloroplast targeting | 5.94E-04 |
| 18 | GO:0009509: chromoplast | 9.62E-04 |
| 19 | GO:0009317: acetyl-CoA carboxylase complex | 9.62E-04 |
| 20 | GO:0015935: small ribosomal subunit | 1.48E-03 |
| 21 | GO:0046658: anchored component of plasma membrane | 1.76E-03 |
| 22 | GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain | 2.35E-03 |
| 23 | GO:0048046: apoplast | 2.68E-03 |
| 24 | GO:0009295: nucleoid | 3.83E-03 |
| 25 | GO:0042807: central vacuole | 4.12E-03 |
| 26 | GO:0009534: chloroplast thylakoid | 5.04E-03 |
| 27 | GO:0000326: protein storage vacuole | 5.47E-03 |
| 28 | GO:0009539: photosystem II reaction center | 5.47E-03 |
| 29 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 5.47E-03 |
| 30 | GO:0005763: mitochondrial small ribosomal subunit | 6.20E-03 |
| 31 | GO:0015934: large ribosomal subunit | 6.49E-03 |
| 32 | GO:0000311: plastid large ribosomal subunit | 9.44E-03 |
| 33 | GO:0000312: plastid small ribosomal subunit | 1.12E-02 |
| 34 | GO:0030095: chloroplast photosystem II | 1.12E-02 |
| 35 | GO:0042651: thylakoid membrane | 1.52E-02 |
| 36 | GO:0009532: plastid stroma | 1.62E-02 |
| 37 | GO:0009523: photosystem II | 2.55E-02 |
| 38 | GO:0031965: nuclear membrane | 2.55E-02 |
| 39 | GO:0071944: cell periphery | 2.94E-02 |
| 40 | GO:0005778: peroxisomal membrane | 3.21E-02 |
| 41 | GO:0030529: intracellular ribonucleoprotein complex | 3.48E-02 |
| 42 | GO:0005773: vacuole | 3.96E-02 |