co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G14760

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
2	GO:1901698: response to nitrogen compound	0.00E+00
3	GO:0006642: triglyceride mobilization	0.00E+00
4	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
5	GO:0097164: ammonium ion metabolic process	0.00E+00
6	GO:0060416: response to growth hormone	0.00E+00
7	GO:0006399: tRNA metabolic process	0.00E+00
8	GO:0010583: response to cyclopentenone	5.65E-06
9	GO:0006782: protoporphyrinogen IX biosynthetic process	6.87E-06
10	GO:0042335: cuticle development	8.06E-05
11	GO:0010444: guard mother cell differentiation	9.72E-05
12	GO:0046520: sphingoid biosynthetic process	1.67E-04
13	GO:0046166: glyceraldehyde-3-phosphate biosynthetic process	1.67E-04
14	GO:0043007: maintenance of rDNA	1.67E-04
15	GO:0006783: heme biosynthetic process	1.91E-04
16	GO:0006779: porphyrin-containing compound biosynthetic process	2.29E-04
17	GO:0015995: chlorophyll biosynthetic process	2.61E-04
18	GO:0000038: very long-chain fatty acid metabolic process	3.13E-04
19	GO:0006695: cholesterol biosynthetic process	3.78E-04
20	GO:0010115: regulation of abscisic acid biosynthetic process	3.78E-04
21	GO:0070981: L-asparagine biosynthetic process	3.78E-04
22	GO:0080148: negative regulation of response to water deprivation	3.78E-04
23	GO:0006529: asparagine biosynthetic process	3.78E-04
24	GO:0006833: water transport	5.76E-04
25	GO:0032504: multicellular organism reproduction	6.19E-04
26	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	6.19E-04
27	GO:0015840: urea transport	6.19E-04
28	GO:0071705: nitrogen compound transport	6.19E-04
29	GO:0019563: glycerol catabolic process	6.19E-04
30	GO:0005992: trehalose biosynthetic process	6.38E-04
31	GO:0009658: chloroplast organization	7.91E-04
32	GO:0006424: glutamyl-tRNA aminoacylation	8.83E-04
33	GO:2001141: regulation of RNA biosynthetic process	8.83E-04
34	GO:0000271: polysaccharide biosynthetic process	1.15E-03
35	GO:0071249: cellular response to nitrate	1.17E-03
36	GO:0000919: cell plate assembly	1.17E-03
37	GO:0006749: glutathione metabolic process	1.17E-03
38	GO:0006808: regulation of nitrogen utilization	1.17E-03
39	GO:0032543: mitochondrial translation	1.48E-03
40	GO:0006564: L-serine biosynthetic process	1.48E-03
41	GO:0045038: protein import into chloroplast thylakoid membrane	1.48E-03
42	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.83E-03
43	GO:0009972: cytidine deamination	1.83E-03
44	GO:0006561: proline biosynthetic process	1.83E-03
45	GO:0010405: arabinogalactan protein metabolic process	1.83E-03
46	GO:0010027: thylakoid membrane organization	2.18E-03
47	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.19E-03
48	GO:0042372: phylloquinone biosynthetic process	2.19E-03
49	GO:0006694: steroid biosynthetic process	2.19E-03
50	GO:0048280: vesicle fusion with Golgi apparatus	2.19E-03
51	GO:0009854: oxidative photosynthetic carbon pathway	2.19E-03
52	GO:0006633: fatty acid biosynthetic process	2.25E-03
53	GO:0040008: regulation of growth	2.39E-03
54	GO:0009610: response to symbiotic fungus	2.58E-03
55	GO:0030497: fatty acid elongation	2.58E-03
56	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	2.58E-03
57	GO:0071669: plant-type cell wall organization or biogenesis	2.58E-03
58	GO:0050829: defense response to Gram-negative bacterium	2.58E-03
59	GO:0000160: phosphorelay signal transduction system	2.98E-03
60	GO:0007155: cell adhesion	2.99E-03
61	GO:0006605: protein targeting	2.99E-03
62	GO:0009704: de-etiolation	2.99E-03
63	GO:0009932: cell tip growth	3.41E-03
64	GO:0071482: cellular response to light stimulus	3.41E-03
65	GO:0032544: plastid translation	3.41E-03
66	GO:0009808: lignin metabolic process	3.41E-03
67	GO:0045337: farnesyl diphosphate biosynthetic process	3.86E-03
68	GO:0033384: geranyl diphosphate biosynthetic process	3.86E-03
69	GO:0009735: response to cytokinin	4.10E-03
70	GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	4.33E-03
71	GO:0006896: Golgi to vacuole transport	4.81E-03
72	GO:0006535: cysteine biosynthetic process from serine	4.81E-03
73	GO:0009688: abscisic acid biosynthetic process	4.81E-03
74	GO:0008643: carbohydrate transport	4.99E-03
75	GO:0007049: cell cycle	5.07E-03
76	GO:0006415: translational termination	5.32E-03
77	GO:0009073: aromatic amino acid family biosynthetic process	5.32E-03
78	GO:0006352: DNA-templated transcription, initiation	5.32E-03
79	GO:0009750: response to fructose	5.32E-03
80	GO:0015706: nitrate transport	5.84E-03
81	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	6.05E-03
82	GO:0009736: cytokinin-activated signaling pathway	6.21E-03
83	GO:0006094: gluconeogenesis	6.38E-03
84	GO:0030036: actin cytoskeleton organization	6.38E-03
85	GO:0050826: response to freezing	6.38E-03
86	GO:0006541: glutamine metabolic process	6.93E-03
87	GO:0019253: reductive pentose-phosphate cycle	6.93E-03
88	GO:0006096: glycolytic process	7.34E-03
89	GO:0010167: response to nitrate	7.50E-03
90	GO:0010025: wax biosynthetic process	8.10E-03
91	GO:0019344: cysteine biosynthetic process	8.70E-03
92	GO:0007017: microtubule-based process	9.33E-03
93	GO:0051726: regulation of cell cycle	9.37E-03
94	GO:0016226: iron-sulfur cluster assembly	1.06E-02
95	GO:0019722: calcium-mediated signaling	1.20E-02
96	GO:0042127: regulation of cell proliferation	1.20E-02
97	GO:0009306: protein secretion	1.20E-02
98	GO:0042147: retrograde transport, endosome to Golgi	1.27E-02
99	GO:0009414: response to water deprivation	1.32E-02
100	GO:0080022: primary root development	1.34E-02
101	GO:0034220: ion transmembrane transport	1.34E-02
102	GO:0000413: protein peptidyl-prolyl isomerization	1.34E-02
103	GO:0071555: cell wall organization	1.37E-02
104	GO:0045489: pectin biosynthetic process	1.41E-02
105	GO:0010182: sugar mediated signaling pathway	1.41E-02
106	GO:0009646: response to absence of light	1.49E-02
107	GO:0006623: protein targeting to vacuole	1.56E-02
108	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.64E-02
109	GO:0006891: intra-Golgi vesicle-mediated transport	1.64E-02
110	GO:0016132: brassinosteroid biosynthetic process	1.64E-02
111	GO:0007166: cell surface receptor signaling pathway	1.75E-02
112	GO:0009567: double fertilization forming a zygote and endosperm	1.88E-02
113	GO:0007267: cell-cell signaling	1.96E-02
114	GO:0000910: cytokinesis	2.04E-02
115	GO:0055114: oxidation-reduction process	2.12E-02
116	GO:0016126: sterol biosynthetic process	2.13E-02
117	GO:0051301: cell division	2.19E-02
118	GO:0006888: ER to Golgi vesicle-mediated transport	2.39E-02
119	GO:0042254: ribosome biogenesis	2.42E-02
120	GO:0016311: dephosphorylation	2.48E-02
121	GO:0009860: pollen tube growth	2.56E-02
122	GO:0030244: cellulose biosynthetic process	2.57E-02
123	GO:0009832: plant-type cell wall biogenesis	2.67E-02
124	GO:0009834: plant-type secondary cell wall biogenesis	2.76E-02
125	GO:0009407: toxin catabolic process	2.76E-02
126	GO:0007568: aging	2.85E-02
127	GO:0048527: lateral root development	2.85E-02
128	GO:0080167: response to karrikin	2.95E-02
129	GO:0009853: photorespiration	3.05E-02
130	GO:0016051: carbohydrate biosynthetic process	3.05E-02
131	GO:0009637: response to blue light	3.05E-02
132	GO:0030001: metal ion transport	3.34E-02
133	GO:0009640: photomorphogenesis	3.65E-02
134	GO:0010114: response to red light	3.65E-02
135	GO:0042546: cell wall biogenesis	3.75E-02
136	GO:0006869: lipid transport	3.86E-02
137	GO:0009636: response to toxic substance	3.96E-02
138	GO:0016042: lipid catabolic process	4.21E-02
139	GO:0042538: hyperosmotic salinity response	4.29E-02
140	GO:0051603: proteolysis involved in cellular protein catabolic process	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0005048: signal sequence binding	0.00E+00
2	GO:0050614: delta24-sterol reductase activity	0.00E+00
3	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	0.00E+00
4	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
5	GO:0008887: glycerate kinase activity	0.00E+00
6	GO:0047661: amino-acid racemase activity	0.00E+00
7	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
8	GO:0051753: mannan synthase activity	7.27E-05
9	GO:0000170: sphingosine hydroxylase activity	1.67E-04
10	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	1.67E-04
11	GO:0004807: triose-phosphate isomerase activity	1.67E-04
12	GO:0004655: porphobilinogen synthase activity	1.67E-04
13	GO:0004071: aspartate-ammonia ligase activity	1.67E-04
14	GO:0004853: uroporphyrinogen decarboxylase activity	1.67E-04
15	GO:0009374: biotin binding	1.67E-04
16	GO:0015200: methylammonium transmembrane transporter activity	1.67E-04
17	GO:0004805: trehalose-phosphatase activity	2.70E-04
18	GO:0004617: phosphoglycerate dehydrogenase activity	3.78E-04
19	GO:0042284: sphingolipid delta-4 desaturase activity	3.78E-04
20	GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity	3.78E-04
21	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	5.76E-04
22	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	5.76E-04
23	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	5.76E-04
24	GO:0017150: tRNA dihydrouridine synthase activity	6.19E-04
25	GO:0004148: dihydrolipoyl dehydrogenase activity	6.19E-04
26	GO:0008097: 5S rRNA binding	8.83E-04
27	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	8.83E-04
28	GO:0016149: translation release factor activity, codon specific	8.83E-04
29	GO:0001053: plastid sigma factor activity	1.17E-03
30	GO:0016987: sigma factor activity	1.17E-03
31	GO:0004506: squalene monooxygenase activity	1.17E-03
32	GO:0046527: glucosyltransferase activity	1.17E-03
33	GO:0015204: urea transmembrane transporter activity	1.17E-03
34	GO:0009922: fatty acid elongase activity	1.48E-03
35	GO:0004040: amidase activity	1.48E-03
36	GO:0003989: acetyl-CoA carboxylase activity	1.48E-03
37	GO:0000156: phosphorelay response regulator activity	1.72E-03
38	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.83E-03
39	GO:0016208: AMP binding	1.83E-03
40	GO:0008519: ammonium transmembrane transporter activity	1.83E-03
41	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.95E-03
42	GO:0005200: structural constituent of cytoskeleton	1.95E-03
43	GO:0016597: amino acid binding	2.06E-03
44	GO:0015250: water channel activity	2.18E-03
45	GO:0004124: cysteine synthase activity	2.19E-03
46	GO:0004126: cytidine deaminase activity	2.19E-03
47	GO:0008312: 7S RNA binding	2.99E-03
48	GO:0004033: aldo-keto reductase (NADP) activity	2.99E-03
49	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.12E-03
50	GO:0004337: geranyltranstransferase activity	3.86E-03
51	GO:0003747: translation release factor activity	3.86E-03
52	GO:0050660: flavin adenine dinucleotide binding	5.31E-03
53	GO:0004161: dimethylallyltranstransferase activity	5.32E-03
54	GO:0008794: arsenate reductase (glutaredoxin) activity	5.32E-03
55	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	5.38E-03
56	GO:0004022: alcohol dehydrogenase (NAD) activity	6.38E-03
57	GO:0031072: heat shock protein binding	6.38E-03
58	GO:0052689: carboxylic ester hydrolase activity	6.58E-03
59	GO:0004672: protein kinase activity	7.24E-03
60	GO:0051119: sugar transmembrane transporter activity	7.50E-03
61	GO:0005528: FK506 binding	8.70E-03
62	GO:0051536: iron-sulfur cluster binding	8.70E-03
63	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.06E-02
64	GO:0016758: transferase activity, transferring hexosyl groups	1.08E-02
65	GO:0019843: rRNA binding	1.11E-02
66	GO:0016760: cellulose synthase (UDP-forming) activity	1.13E-02
67	GO:0008514: organic anion transmembrane transporter activity	1.20E-02
68	GO:0003756: protein disulfide isomerase activity	1.20E-02
69	GO:0003713: transcription coactivator activity	1.41E-02
70	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.43E-02
71	GO:0008289: lipid binding	1.45E-02
72	GO:0010181: FMN binding	1.49E-02
73	GO:0019901: protein kinase binding	1.56E-02
74	GO:0003824: catalytic activity	1.57E-02
75	GO:0016788: hydrolase activity, acting on ester bonds	2.42E-02
76	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.57E-02
77	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.85E-02
78	GO:0005507: copper ion binding	3.06E-02
79	GO:0003993: acid phosphatase activity	3.14E-02
80	GO:0000149: SNARE binding	3.24E-02
81	GO:0004364: glutathione transferase activity	3.55E-02
82	GO:0004185: serine-type carboxypeptidase activity	3.65E-02
83	GO:0005484: SNAP receptor activity	3.65E-02
84	GO:0003735: structural constituent of ribosome	3.78E-02
85	GO:0051537: 2 iron, 2 sulfur cluster binding	3.86E-02
86	GO:0051287: NAD binding	4.18E-02
87	GO:0003924: GTPase activity	4.34E-02
88	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.51E-02
89	GO:0009055: electron carrier activity	4.65E-02
90	GO:0045330: aspartyl esterase activity	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	0.00E+00
2	GO:0009570: chloroplast stroma	1.71E-11
3	GO:0009941: chloroplast envelope	7.22E-09
4	GO:0009507: chloroplast	1.09E-05
5	GO:0031225: anchored component of membrane	1.83E-05
6	GO:0009505: plant-type cell wall	8.59E-05
7	GO:0046658: anchored component of plasma membrane	8.59E-05
8	GO:0005794: Golgi apparatus	3.20E-04
9	GO:0080085: signal recognition particle, chloroplast targeting	3.78E-04
10	GO:0009509: chromoplast	6.19E-04
11	GO:0009317: acetyl-CoA carboxylase complex	6.19E-04
12	GO:0009534: chloroplast thylakoid	1.49E-03
13	GO:0000139: Golgi membrane	1.75E-03
14	GO:0009295: nucleoid	1.95E-03
15	GO:0009506: plasmodesma	1.97E-03
16	GO:0042807: central vacuole	2.58E-03
17	GO:0012507: ER to Golgi transport vesicle membrane	2.99E-03
18	GO:0005773: vacuole	3.35E-03
19	GO:0005576: extracellular region	3.38E-03
20	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	3.41E-03
21	GO:0000326: protein storage vacuole	3.41E-03
22	GO:0045298: tubulin complex	3.86E-03
23	GO:0031977: thylakoid lumen	4.26E-03
24	GO:0009508: plastid chromosome	6.38E-03
25	GO:0000312: plastid small ribosomal subunit	6.93E-03
26	GO:0005886: plasma membrane	1.07E-02
27	GO:0009543: chloroplast thylakoid lumen	1.11E-02
28	GO:0048046: apoplast	1.22E-02
29	GO:0005887: integral component of plasma membrane	1.40E-02
30	GO:0005618: cell wall	1.44E-02
31	GO:0009504: cell plate	1.56E-02
32	GO:0071944: cell periphery	1.80E-02
33	GO:0005778: peroxisomal membrane	1.96E-02
34	GO:0009579: thylakoid	2.46E-02
35	GO:0016020: membrane	2.56E-02
36	GO:0031201: SNARE complex	3.44E-02
37	GO:0031902: late endosome membrane	3.44E-02
38	GO:0005802: trans-Golgi network	3.55E-02
39	GO:0005856: cytoskeleton	3.96E-02
40	GO:0005768: endosome	4.15E-02
41	GO:0009535: chloroplast thylakoid membrane	4.47E-02
42	GO:0005840: ribosome	5.00E-02