co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G14620

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway	0.00E+00
2	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
3	GO:0010398: xylogalacturonan metabolic process	0.00E+00
4	GO:0006468: protein phosphorylation	1.06E-08
5	GO:0000187: activation of MAPK activity	8.84E-08
6	GO:0010200: response to chitin	9.96E-07
7	GO:2000037: regulation of stomatal complex patterning	2.00E-06
8	GO:0009814: defense response, incompatible interaction	4.17E-06
9	GO:0006952: defense response	5.65E-06
10	GO:0048194: Golgi vesicle budding	2.34E-05
11	GO:0010229: inflorescence development	3.56E-05
12	GO:0060548: negative regulation of cell death	4.26E-05
13	GO:2000038: regulation of stomatal complex development	4.26E-05
14	GO:0042742: defense response to bacterium	4.88E-05
15	GO:0031348: negative regulation of defense response	1.13E-04
16	GO:0009612: response to mechanical stimulus	1.37E-04
17	GO:0070370: cellular heat acclimation	1.80E-04
18	GO:0006805: xenobiotic metabolic process	2.48E-04
19	GO:0010365: positive regulation of ethylene biosynthetic process	2.48E-04
20	GO:0071366: cellular response to indolebutyric acid stimulus	2.48E-04
21	GO:0080136: priming of cellular response to stress	2.48E-04
22	GO:0006643: membrane lipid metabolic process	2.48E-04
23	GO:0055071: manganese ion homeostasis	2.48E-04
24	GO:0006680: glucosylceramide catabolic process	2.48E-04
25	GO:0060862: negative regulation of floral organ abscission	2.48E-04
26	GO:0010120: camalexin biosynthetic process	2.82E-04
27	GO:0043562: cellular response to nitrogen levels	2.82E-04
28	GO:0009626: plant-type hypersensitive response	3.43E-04
29	GO:0052544: defense response by callose deposition in cell wall	5.47E-04
30	GO:0006212: uracil catabolic process	5.49E-04
31	GO:0007584: response to nutrient	5.49E-04
32	GO:0031349: positive regulation of defense response	5.49E-04
33	GO:0019483: beta-alanine biosynthetic process	5.49E-04
34	GO:0010541: acropetal auxin transport	5.49E-04
35	GO:0002221: pattern recognition receptor signaling pathway	5.49E-04
36	GO:0015914: phospholipid transport	5.49E-04
37	GO:0009817: defense response to fungus, incompatible interaction	6.20E-04
38	GO:0034605: cellular response to heat	7.98E-04
39	GO:0006979: response to oxidative stress	8.84E-04
40	GO:0042344: indole glucosinolate catabolic process	8.92E-04
41	GO:1900140: regulation of seedling development	8.92E-04
42	GO:0051176: positive regulation of sulfur metabolic process	8.92E-04
43	GO:0070588: calcium ion transmembrane transport	8.92E-04
44	GO:0006517: protein deglycosylation	8.92E-04
45	GO:0010150: leaf senescence	9.61E-04
46	GO:0050832: defense response to fungus	1.16E-03
47	GO:0007166: cell surface receptor signaling pathway	1.17E-03
48	GO:0009617: response to bacterium	1.25E-03
49	GO:0007231: osmosensory signaling pathway	1.27E-03
50	GO:0009399: nitrogen fixation	1.27E-03
51	GO:0002679: respiratory burst involved in defense response	1.27E-03
52	GO:0000165: MAPK cascade	1.45E-03
53	GO:0010227: floral organ abscission	1.57E-03
54	GO:0048830: adventitious root development	1.70E-03
55	GO:1902584: positive regulation of response to water deprivation	1.70E-03
56	GO:0010107: potassium ion import	1.70E-03
57	GO:0033500: carbohydrate homeostasis	1.70E-03
58	GO:0010508: positive regulation of autophagy	1.70E-03
59	GO:0080142: regulation of salicylic acid biosynthetic process	1.70E-03
60	GO:0006542: glutamine biosynthetic process	1.70E-03
61	GO:0006090: pyruvate metabolic process	2.17E-03
62	GO:0031365: N-terminal protein amino acid modification	2.17E-03
63	GO:0009229: thiamine diphosphate biosynthetic process	2.17E-03
64	GO:0048544: recognition of pollen	2.31E-03
65	GO:0006623: protein targeting to vacuole	2.47E-03
66	GO:0010183: pollen tube guidance	2.47E-03
67	GO:0000302: response to reactive oxygen species	2.64E-03
68	GO:0006828: manganese ion transport	2.67E-03
69	GO:0060918: auxin transport	2.67E-03
70	GO:1900425: negative regulation of defense response to bacterium	2.67E-03
71	GO:0009228: thiamine biosynthetic process	2.67E-03
72	GO:0006014: D-ribose metabolic process	2.67E-03
73	GO:0009759: indole glucosinolate biosynthetic process	2.67E-03
74	GO:0010942: positive regulation of cell death	2.67E-03
75	GO:0015691: cadmium ion transport	2.67E-03
76	GO:0006751: glutathione catabolic process	2.67E-03
77	GO:0030163: protein catabolic process	3.01E-03
78	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.21E-03
79	GO:0000911: cytokinesis by cell plate formation	3.21E-03
80	GO:0046470: phosphatidylcholine metabolic process	3.79E-03
81	GO:0043090: amino acid import	3.79E-03
82	GO:0071446: cellular response to salicylic acid stimulus	3.79E-03
83	GO:0010044: response to aluminum ion	3.79E-03
84	GO:0009816: defense response to bacterium, incompatible interaction	4.03E-03
85	GO:0009627: systemic acquired resistance	4.26E-03
86	GO:0016559: peroxisome fission	4.39E-03
87	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.39E-03
88	GO:0009819: drought recovery	4.39E-03
89	GO:0006491: N-glycan processing	4.39E-03
90	GO:1900150: regulation of defense response to fungus	4.39E-03
91	GO:0008219: cell death	4.97E-03
92	GO:2000031: regulation of salicylic acid mediated signaling pathway	5.03E-03
93	GO:0006002: fructose 6-phosphate metabolic process	5.03E-03
94	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	5.03E-03
95	GO:0009409: response to cold	5.44E-03
96	GO:0009051: pentose-phosphate shunt, oxidative branch	5.70E-03
97	GO:0051865: protein autoubiquitination	5.70E-03
98	GO:0006995: cellular response to nitrogen starvation	7.12E-03
99	GO:0043069: negative regulation of programmed cell death	7.12E-03
100	GO:0009641: shade avoidance	7.12E-03
101	GO:0009684: indoleacetic acid biosynthetic process	7.88E-03
102	GO:0006816: calcium ion transport	7.88E-03
103	GO:0009698: phenylpropanoid metabolic process	7.88E-03
104	GO:0009682: induced systemic resistance	7.88E-03
105	GO:0072593: reactive oxygen species metabolic process	7.88E-03
106	GO:0030148: sphingolipid biosynthetic process	7.88E-03
107	GO:0051707: response to other organism	8.13E-03
108	GO:0000266: mitochondrial fission	8.66E-03
109	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	8.66E-03
110	GO:0009636: response to toxic substance	9.14E-03
111	GO:0006807: nitrogen compound metabolic process	9.47E-03
112	GO:0006108: malate metabolic process	9.47E-03
113	GO:0006508: proteolysis	9.93E-03
114	GO:0006970: response to osmotic stress	9.99E-03
115	GO:0071555: cell wall organization	1.00E-02
116	GO:0010053: root epidermal cell differentiation	1.12E-02
117	GO:0000162: tryptophan biosynthetic process	1.21E-02
118	GO:0009833: plant-type primary cell wall biogenesis	1.21E-02
119	GO:0080147: root hair cell development	1.30E-02
120	GO:2000377: regulation of reactive oxygen species metabolic process	1.30E-02
121	GO:0009695: jasmonic acid biosynthetic process	1.39E-02
122	GO:0009620: response to fungus	1.43E-02
123	GO:0016998: cell wall macromolecule catabolic process	1.49E-02
124	GO:0051260: protein homooligomerization	1.49E-02
125	GO:0015031: protein transport	1.52E-02
126	GO:0016226: iron-sulfur cluster assembly	1.59E-02
127	GO:0007005: mitochondrion organization	1.59E-02
128	GO:0006012: galactose metabolic process	1.69E-02
129	GO:0071215: cellular response to abscisic acid stimulus	1.69E-02
130	GO:0009625: response to insect	1.69E-02
131	GO:0016042: lipid catabolic process	1.89E-02
132	GO:0042147: retrograde transport, endosome to Golgi	1.90E-02
133	GO:0010118: stomatal movement	2.01E-02
134	GO:0042631: cellular response to water deprivation	2.01E-02
135	GO:0042391: regulation of membrane potential	2.01E-02
136	GO:0000271: polysaccharide biosynthetic process	2.01E-02
137	GO:0000413: protein peptidyl-prolyl isomerization	2.01E-02
138	GO:0010051: xylem and phloem pattern formation	2.01E-02
139	GO:0045489: pectin biosynthetic process	2.12E-02
140	GO:0008360: regulation of cell shape	2.12E-02
141	GO:0006885: regulation of pH	2.12E-02
142	GO:0010197: polar nucleus fusion	2.12E-02
143	GO:0046323: glucose import	2.12E-02
144	GO:0009646: response to absence of light	2.23E-02
145	GO:0061025: membrane fusion	2.23E-02
146	GO:0009790: embryo development	2.29E-02
147	GO:0019252: starch biosynthetic process	2.34E-02
148	GO:0006891: intra-Golgi vesicle-mediated transport	2.46E-02
149	GO:0016032: viral process	2.58E-02
150	GO:0006904: vesicle docking involved in exocytosis	2.94E-02
151	GO:0006470: protein dephosphorylation	3.10E-02
152	GO:0009615: response to virus	3.19E-02
153	GO:0009607: response to biotic stimulus	3.32E-02
154	GO:0042128: nitrate assimilation	3.46E-02
155	GO:0009737: response to abscisic acid	3.62E-02
156	GO:0009738: abscisic acid-activated signaling pathway	3.84E-02
157	GO:0048481: plant ovule development	3.86E-02
158	GO:0030244: cellulose biosynthetic process	3.86E-02
159	GO:0009813: flavonoid biosynthetic process	4.00E-02
160	GO:0010311: lateral root formation	4.00E-02
161	GO:0009832: plant-type cell wall biogenesis	4.00E-02
162	GO:0009611: response to wounding	4.11E-02
163	GO:0006499: N-terminal protein myristoylation	4.14E-02
164	GO:0009407: toxin catabolic process	4.14E-02
165	GO:0048527: lateral root development	4.28E-02
166	GO:0010119: regulation of stomatal movement	4.28E-02
167	GO:0009631: cold acclimation	4.28E-02
168	GO:0006865: amino acid transport	4.42E-02
169	GO:0016310: phosphorylation	4.55E-02
170	GO:0016051: carbohydrate biosynthetic process	4.56E-02

Rank	GO Term	Adjusted P value
1	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
2	GO:0015370: solute:sodium symporter activity	0.00E+00
3	GO:0003837: beta-ureidopropionase activity	0.00E+00
4	GO:0070577: lysine-acetylated histone binding	0.00E+00
5	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
6	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
7	GO:0050334: thiaminase activity	0.00E+00
8	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
9	GO:0015410: manganese-transporting ATPase activity	0.00E+00
10	GO:0016504: peptidase activator activity	0.00E+00
11	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
12	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
13	GO:0016301: kinase activity	1.97E-13
14	GO:0005524: ATP binding	1.68E-11
15	GO:0004012: phospholipid-translocating ATPase activity	2.00E-06
16	GO:0004674: protein serine/threonine kinase activity	2.85E-06
17	GO:0004708: MAP kinase kinase activity	4.92E-06
18	GO:0005388: calcium-transporting ATPase activity	3.56E-05
19	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.56E-05
20	GO:0004190: aspartic-type endopeptidase activity	5.22E-05
21	GO:0005516: calmodulin binding	1.00E-04
22	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.28E-04
23	GO:0015085: calcium ion transmembrane transporter activity	2.48E-04
24	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	2.48E-04
25	GO:0004348: glucosylceramidase activity	2.48E-04
26	GO:0015168: glycerol transmembrane transporter activity	2.48E-04
27	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.80E-04
28	GO:0045140: inositol phosphoceramide synthase activity	5.49E-04
29	GO:0005509: calcium ion binding	7.29E-04
30	GO:0052692: raffinose alpha-galactosidase activity	8.92E-04
31	GO:0016174: NAD(P)H oxidase activity	8.92E-04
32	GO:0004557: alpha-galactosidase activity	8.92E-04
33	GO:0003840: gamma-glutamyltransferase activity	8.92E-04
34	GO:0036374: glutathione hydrolase activity	8.92E-04
35	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	8.92E-04
36	GO:0005354: galactose transmembrane transporter activity	1.27E-03
37	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.27E-03
38	GO:0015086: cadmium ion transmembrane transporter activity	1.27E-03
39	GO:0033612: receptor serine/threonine kinase binding	1.32E-03
40	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	1.70E-03
41	GO:0070628: proteasome binding	1.70E-03
42	GO:0004470: malic enzyme activity	1.70E-03
43	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	1.70E-03
44	GO:0015204: urea transmembrane transporter activity	1.70E-03
45	GO:0045431: flavonol synthase activity	2.17E-03
46	GO:0015145: monosaccharide transmembrane transporter activity	2.17E-03
47	GO:0008948: oxaloacetate decarboxylase activity	2.17E-03
48	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.17E-03
49	GO:0004356: glutamate-ammonia ligase activity	2.17E-03
50	GO:0005515: protein binding	2.45E-03
51	GO:0035252: UDP-xylosyltransferase activity	2.67E-03
52	GO:0004747: ribokinase activity	3.21E-03
53	GO:0004656: procollagen-proline 4-dioxygenase activity	3.21E-03
54	GO:0008235: metalloexopeptidase activity	3.79E-03
55	GO:0003872: 6-phosphofructokinase activity	3.79E-03
56	GO:0008320: protein transmembrane transporter activity	3.79E-03
57	GO:0004034: aldose 1-epimerase activity	4.39E-03
58	GO:0008865: fructokinase activity	4.39E-03
59	GO:0030247: polysaccharide binding	4.49E-03
60	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.76E-03
61	GO:0030246: carbohydrate binding	4.92E-03
62	GO:0003843: 1,3-beta-D-glucan synthase activity	5.03E-03
63	GO:0004630: phospholipase D activity	5.03E-03
64	GO:0005267: potassium channel activity	5.03E-03
65	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	5.03E-03
66	GO:0016207: 4-coumarate-CoA ligase activity	5.70E-03
67	GO:0004672: protein kinase activity	6.38E-03
68	GO:0008047: enzyme activator activity	7.12E-03
69	GO:0004713: protein tyrosine kinase activity	7.12E-03
70	GO:0004177: aminopeptidase activity	7.88E-03
71	GO:0000287: magnesium ion binding	8.87E-03
72	GO:0015293: symporter activity	9.14E-03
73	GO:0005262: calcium channel activity	9.47E-03
74	GO:0030552: cAMP binding	1.12E-02
75	GO:0030553: cGMP binding	1.12E-02
76	GO:0008061: chitin binding	1.12E-02
77	GO:0016298: lipase activity	1.14E-02
78	GO:0031625: ubiquitin protein ligase binding	1.22E-02
79	GO:0031418: L-ascorbic acid binding	1.30E-02
80	GO:0003954: NADH dehydrogenase activity	1.30E-02
81	GO:0005216: ion channel activity	1.39E-02
82	GO:0004707: MAP kinase activity	1.49E-02
83	GO:0008810: cellulase activity	1.69E-02
84	GO:0016760: cellulose synthase (UDP-forming) activity	1.69E-02
85	GO:0030551: cyclic nucleotide binding	2.01E-02
86	GO:0005451: monovalent cation:proton antiporter activity	2.01E-02
87	GO:0005249: voltage-gated potassium channel activity	2.01E-02
88	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.02E-02
89	GO:0016853: isomerase activity	2.23E-02
90	GO:0015299: solute:proton antiporter activity	2.23E-02
91	GO:0005355: glucose transmembrane transporter activity	2.23E-02
92	GO:0015385: sodium:proton antiporter activity	2.70E-02
93	GO:0016759: cellulose synthase activity	2.82E-02
94	GO:0005506: iron ion binding	3.11E-02
95	GO:0016757: transferase activity, transferring glycosyl groups	3.17E-02
96	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.44E-02
97	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.46E-02
98	GO:0004683: calmodulin-dependent protein kinase activity	3.59E-02
99	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.59E-02
100	GO:0004222: metalloendopeptidase activity	4.14E-02
101	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.56E-02
102	GO:0043531: ADP binding	4.58E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.09E-20
2	GO:0016021: integral component of membrane	1.07E-13
3	GO:0005789: endoplasmic reticulum membrane	4.25E-05
4	GO:0005802: trans-Golgi network	1.21E-04
5	GO:0031902: late endosome membrane	1.22E-04
6	GO:0000139: Golgi membrane	1.31E-04
7	GO:0005887: integral component of plasma membrane	4.33E-04
8	GO:0017119: Golgi transport complex	4.74E-04
9	GO:0031304: intrinsic component of mitochondrial inner membrane	5.49E-04
10	GO:0005901: caveola	5.49E-04
11	GO:0016020: membrane	1.02E-03
12	GO:0005794: Golgi apparatus	1.12E-03
13	GO:0070062: extracellular exosome	1.27E-03
14	GO:0005945: 6-phosphofructokinase complex	2.17E-03
15	GO:0009504: cell plate	2.47E-03
16	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.79E-03
17	GO:0000148: 1,3-beta-D-glucan synthase complex	5.03E-03
18	GO:0030665: clathrin-coated vesicle membrane	6.40E-03
19	GO:0005768: endosome	8.35E-03
20	GO:0031012: extracellular matrix	9.47E-03
21	GO:0005783: endoplasmic reticulum	1.02E-02
22	GO:0009506: plasmodesma	1.05E-02
23	GO:0005839: proteasome core complex	1.49E-02
24	GO:0005741: mitochondrial outer membrane	1.49E-02
25	GO:0019898: extrinsic component of membrane	2.34E-02
26	GO:0000145: exocyst	2.58E-02
27	GO:0071944: cell periphery	2.70E-02
28	GO:0032580: Golgi cisterna membrane	2.82E-02
29	GO:0005778: peroxisomal membrane	2.94E-02
30	GO:0005774: vacuolar membrane	3.28E-02
31	GO:0046658: anchored component of plasma membrane	3.59E-02
32	GO:0000151: ubiquitin ligase complex	3.86E-02
33	GO:0005618: cell wall	4.19E-02
34	GO:0009505: plant-type cell wall	4.41E-02
35	GO:0005777: peroxisome	4.73E-02