GO Enrichment Analysis of Co-expressed Genes with
AT3G13800
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018160: peptidyl-pyrromethane cofactor linkage | 0.00E+00 |
| 2 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 3 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 4 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 5 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 6 | GO:0032544: plastid translation | 2.35E-10 |
| 7 | GO:1901259: chloroplast rRNA processing | 6.94E-06 |
| 8 | GO:0015995: chlorophyll biosynthetic process | 1.41E-05 |
| 9 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.59E-05 |
| 10 | GO:0009658: chloroplast organization | 2.78E-05 |
| 11 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.14E-05 |
| 12 | GO:1904966: positive regulation of vitamin E biosynthetic process | 3.90E-05 |
| 13 | GO:1904964: positive regulation of phytol biosynthetic process | 3.90E-05 |
| 14 | GO:0042371: vitamin K biosynthetic process | 3.90E-05 |
| 15 | GO:0034337: RNA folding | 3.90E-05 |
| 16 | GO:0006434: seryl-tRNA aminoacylation | 3.90E-05 |
| 17 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 3.90E-05 |
| 18 | GO:0006412: translation | 9.65E-05 |
| 19 | GO:0043039: tRNA aminoacylation | 9.72E-05 |
| 20 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 9.72E-05 |
| 21 | GO:0006518: peptide metabolic process | 1.68E-04 |
| 22 | GO:0006241: CTP biosynthetic process | 2.48E-04 |
| 23 | GO:0006165: nucleoside diphosphate phosphorylation | 2.48E-04 |
| 24 | GO:0006228: UTP biosynthetic process | 2.48E-04 |
| 25 | GO:0071483: cellular response to blue light | 3.33E-04 |
| 26 | GO:0006183: GTP biosynthetic process | 3.33E-04 |
| 27 | GO:0010027: thylakoid membrane organization | 3.37E-04 |
| 28 | GO:0010236: plastoquinone biosynthetic process | 4.25E-04 |
| 29 | GO:0030488: tRNA methylation | 6.22E-04 |
| 30 | GO:0010019: chloroplast-nucleus signaling pathway | 6.22E-04 |
| 31 | GO:0009955: adaxial/abaxial pattern specification | 6.22E-04 |
| 32 | GO:0042372: phylloquinone biosynthetic process | 6.22E-04 |
| 33 | GO:0017148: negative regulation of translation | 6.22E-04 |
| 34 | GO:0042742: defense response to bacterium | 7.10E-04 |
| 35 | GO:0009772: photosynthetic electron transport in photosystem II | 7.28E-04 |
| 36 | GO:0006605: protein targeting | 8.37E-04 |
| 37 | GO:0052543: callose deposition in cell wall | 8.37E-04 |
| 38 | GO:0048564: photosystem I assembly | 8.37E-04 |
| 39 | GO:0017004: cytochrome complex assembly | 9.50E-04 |
| 40 | GO:0071482: cellular response to light stimulus | 9.50E-04 |
| 41 | GO:0009657: plastid organization | 9.50E-04 |
| 42 | GO:0006783: heme biosynthetic process | 1.07E-03 |
| 43 | GO:0006352: DNA-templated transcription, initiation | 1.44E-03 |
| 44 | GO:0006415: translational termination | 1.44E-03 |
| 45 | GO:0009073: aromatic amino acid family biosynthetic process | 1.44E-03 |
| 46 | GO:0045037: protein import into chloroplast stroma | 1.58E-03 |
| 47 | GO:0090351: seedling development | 2.01E-03 |
| 48 | GO:0007005: mitochondrion organization | 2.80E-03 |
| 49 | GO:0016226: iron-sulfur cluster assembly | 2.80E-03 |
| 50 | GO:0009411: response to UV | 2.97E-03 |
| 51 | GO:0009306: protein secretion | 3.15E-03 |
| 52 | GO:0016117: carotenoid biosynthetic process | 3.32E-03 |
| 53 | GO:0042254: ribosome biogenesis | 3.48E-03 |
| 54 | GO:0009741: response to brassinosteroid | 3.69E-03 |
| 55 | GO:0015979: photosynthesis | 4.82E-03 |
| 56 | GO:0018298: protein-chromophore linkage | 6.58E-03 |
| 57 | GO:0048481: plant ovule development | 6.58E-03 |
| 58 | GO:0042542: response to hydrogen peroxide | 8.99E-03 |
| 59 | GO:0006812: cation transport | 1.09E-02 |
| 60 | GO:0009585: red, far-red light phototransduction | 1.14E-02 |
| 61 | GO:0045893: positive regulation of transcription, DNA-templated | 1.27E-02 |
| 62 | GO:0009742: brassinosteroid mediated signaling pathway | 1.52E-02 |
| 63 | GO:0009790: embryo development | 1.91E-02 |
| 64 | GO:0006413: translational initiation | 2.05E-02 |
| 65 | GO:0040008: regulation of growth | 2.09E-02 |
| 66 | GO:0007166: cell surface receptor signaling pathway | 2.37E-02 |
| 67 | GO:0048366: leaf development | 3.31E-02 |
| 68 | GO:0046686: response to cadmium ion | 3.50E-02 |
| 69 | GO:0045454: cell redox homeostasis | 3.90E-02 |
| 70 | GO:0032259: methylation | 4.39E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004418: hydroxymethylbilane synthase activity | 0.00E+00 |
| 2 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 3 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 4 | GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding | 0.00E+00 |
| 5 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 6 | GO:0003735: structural constituent of ribosome | 5.50E-06 |
| 7 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 3.90E-05 |
| 8 | GO:0004828: serine-tRNA ligase activity | 3.90E-05 |
| 9 | GO:0051536: iron-sulfur cluster binding | 8.70E-05 |
| 10 | GO:0019843: rRNA binding | 1.38E-04 |
| 11 | GO:0004550: nucleoside diphosphate kinase activity | 2.48E-04 |
| 12 | GO:0043023: ribosomal large subunit binding | 2.48E-04 |
| 13 | GO:0008097: 5S rRNA binding | 2.48E-04 |
| 14 | GO:0001872: (1->3)-beta-D-glucan binding | 2.48E-04 |
| 15 | GO:0016149: translation release factor activity, codon specific | 2.48E-04 |
| 16 | GO:0004659: prenyltransferase activity | 3.33E-04 |
| 17 | GO:0001053: plastid sigma factor activity | 3.33E-04 |
| 18 | GO:0016987: sigma factor activity | 3.33E-04 |
| 19 | GO:0043495: protein anchor | 3.33E-04 |
| 20 | GO:0030414: peptidase inhibitor activity | 4.25E-04 |
| 21 | GO:0019899: enzyme binding | 7.28E-04 |
| 22 | GO:0003747: translation release factor activity | 1.07E-03 |
| 23 | GO:0022891: substrate-specific transmembrane transporter activity | 2.97E-03 |
| 24 | GO:0008080: N-acetyltransferase activity | 3.69E-03 |
| 25 | GO:0010181: FMN binding | 3.87E-03 |
| 26 | GO:0008483: transaminase activity | 5.05E-03 |
| 27 | GO:0016168: chlorophyll binding | 5.69E-03 |
| 28 | GO:0030247: polysaccharide binding | 6.13E-03 |
| 29 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 6.58E-03 |
| 30 | GO:0003729: mRNA binding | 6.73E-03 |
| 31 | GO:0004222: metalloendopeptidase activity | 7.04E-03 |
| 32 | GO:0003746: translation elongation factor activity | 7.75E-03 |
| 33 | GO:0051537: 2 iron, 2 sulfur cluster binding | 9.77E-03 |
| 34 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.03E-02 |
| 35 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.14E-02 |
| 36 | GO:0015035: protein disulfide oxidoreductase activity | 1.49E-02 |
| 37 | GO:0030170: pyridoxal phosphate binding | 1.85E-02 |
| 38 | GO:0008565: protein transporter activity | 1.95E-02 |
| 39 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.05E-02 |
| 40 | GO:0015297: antiporter activity | 2.09E-02 |
| 41 | GO:0003743: translation initiation factor activity | 2.41E-02 |
| 42 | GO:0042802: identical protein binding | 2.56E-02 |
| 43 | GO:0008168: methyltransferase activity | 2.86E-02 |
| 44 | GO:0000287: magnesium ion binding | 2.90E-02 |
| 45 | GO:0016491: oxidoreductase activity | 2.96E-02 |
| 46 | GO:0009055: electron carrier activity | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 4.25E-27 |
| 2 | GO:0009570: chloroplast stroma | 1.02E-18 |
| 3 | GO:0009941: chloroplast envelope | 7.39E-13 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 2.02E-09 |
| 5 | GO:0009579: thylakoid | 3.23E-09 |
| 6 | GO:0005840: ribosome | 3.19E-08 |
| 7 | GO:0009654: photosystem II oxygen evolving complex | 9.72E-05 |
| 8 | GO:0009536: plastid | 1.54E-04 |
| 9 | GO:0015934: large ribosomal subunit | 5.06E-04 |
| 10 | GO:0009539: photosystem II reaction center | 9.50E-04 |
| 11 | GO:0005763: mitochondrial small ribosomal subunit | 1.07E-03 |
| 12 | GO:0000311: plastid large ribosomal subunit | 1.58E-03 |
| 13 | GO:0032040: small-subunit processome | 1.58E-03 |
| 14 | GO:0009543: chloroplast thylakoid lumen | 1.63E-03 |
| 15 | GO:0030095: chloroplast photosystem II | 1.86E-03 |
| 16 | GO:0042651: thylakoid membrane | 2.48E-03 |
| 17 | GO:0009523: photosystem II | 4.06E-03 |
| 18 | GO:0019898: extrinsic component of membrane | 4.06E-03 |
| 19 | GO:0031969: chloroplast membrane | 4.23E-03 |
| 20 | GO:0009707: chloroplast outer membrane | 6.58E-03 |
| 21 | GO:0031977: thylakoid lumen | 8.74E-03 |
| 22 | GO:0009706: chloroplast inner membrane | 1.46E-02 |
| 23 | GO:0005623: cell | 1.75E-02 |
| 24 | GO:0005622: intracellular | 1.97E-02 |
| 25 | GO:0005759: mitochondrial matrix | 2.02E-02 |
| 26 | GO:0046658: anchored component of plasma membrane | 2.63E-02 |
| 27 | GO:0022625: cytosolic large ribosomal subunit | 3.56E-02 |