GO Enrichment Analysis of Co-expressed Genes with
AT3G13230
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000478: endonucleolytic cleavage involved in rRNA processing | 0.00E+00 |
| 2 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 3 | GO:0080056: petal vascular tissue pattern formation | 0.00E+00 |
| 4 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 5 | GO:0031564: transcription antitermination | 0.00E+00 |
| 6 | GO:0080057: sepal vascular tissue pattern formation | 0.00E+00 |
| 7 | GO:0006412: translation | 9.71E-14 |
| 8 | GO:0000027: ribosomal large subunit assembly | 8.25E-09 |
| 9 | GO:0045041: protein import into mitochondrial intermembrane space | 1.05E-07 |
| 10 | GO:0042254: ribosome biogenesis | 1.29E-06 |
| 11 | GO:0006364: rRNA processing | 1.84E-06 |
| 12 | GO:0007005: mitochondrion organization | 2.04E-06 |
| 13 | GO:0046686: response to cadmium ion | 2.87E-06 |
| 14 | GO:0006458: 'de novo' protein folding | 7.36E-06 |
| 15 | GO:0042026: protein refolding | 7.36E-06 |
| 16 | GO:1990258: histone glutamine methylation | 4.04E-05 |
| 17 | GO:0000494: box C/D snoRNA 3'-end processing | 4.04E-05 |
| 18 | GO:0006626: protein targeting to mitochondrion | 5.43E-05 |
| 19 | GO:0061077: chaperone-mediated protein folding | 1.13E-04 |
| 20 | GO:0006954: inflammatory response | 1.73E-04 |
| 21 | GO:1902626: assembly of large subunit precursor of preribosome | 1.73E-04 |
| 22 | GO:0002181: cytoplasmic translation | 1.73E-04 |
| 23 | GO:0045039: protein import into mitochondrial inner membrane | 1.73E-04 |
| 24 | GO:0009735: response to cytokinin | 2.19E-04 |
| 25 | GO:0006228: UTP biosynthetic process | 2.55E-04 |
| 26 | GO:0006164: purine nucleotide biosynthetic process | 2.55E-04 |
| 27 | GO:0051131: chaperone-mediated protein complex assembly | 2.55E-04 |
| 28 | GO:0009113: purine nucleobase biosynthetic process | 2.55E-04 |
| 29 | GO:0070301: cellular response to hydrogen peroxide | 2.55E-04 |
| 30 | GO:0006241: CTP biosynthetic process | 2.55E-04 |
| 31 | GO:0006165: nucleoside diphosphate phosphorylation | 2.55E-04 |
| 32 | GO:0000460: maturation of 5.8S rRNA | 3.43E-04 |
| 33 | GO:0006183: GTP biosynthetic process | 3.43E-04 |
| 34 | GO:0071493: cellular response to UV-B | 4.37E-04 |
| 35 | GO:0031167: rRNA methylation | 4.37E-04 |
| 36 | GO:0010043: response to zinc ion | 5.28E-04 |
| 37 | GO:0000470: maturation of LSU-rRNA | 5.37E-04 |
| 38 | GO:0016444: somatic cell DNA recombination | 6.40E-04 |
| 39 | GO:0009955: adaxial/abaxial pattern specification | 6.40E-04 |
| 40 | GO:0042255: ribosome assembly | 8.61E-04 |
| 41 | GO:0001510: RNA methylation | 9.77E-04 |
| 42 | GO:0006189: 'de novo' IMP biosynthetic process | 1.10E-03 |
| 43 | GO:0010162: seed dormancy process | 1.35E-03 |
| 44 | GO:0006415: translational termination | 1.49E-03 |
| 45 | GO:0010588: cotyledon vascular tissue pattern formation | 1.77E-03 |
| 46 | GO:0048467: gynoecium development | 1.92E-03 |
| 47 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.39E-03 |
| 48 | GO:0006334: nucleosome assembly | 2.72E-03 |
| 49 | GO:0009294: DNA mediated transformation | 3.06E-03 |
| 50 | GO:0008033: tRNA processing | 3.61E-03 |
| 51 | GO:0000413: protein peptidyl-prolyl isomerization | 3.61E-03 |
| 52 | GO:0010305: leaf vascular tissue pattern formation | 3.80E-03 |
| 53 | GO:0032502: developmental process | 4.58E-03 |
| 54 | GO:0009651: response to salt stress | 4.70E-03 |
| 55 | GO:0016049: cell growth | 6.54E-03 |
| 56 | GO:0010311: lateral root formation | 7.01E-03 |
| 57 | GO:0009631: cold acclimation | 7.49E-03 |
| 58 | GO:0048527: lateral root development | 7.49E-03 |
| 59 | GO:0000724: double-strand break repair via homologous recombination | 7.74E-03 |
| 60 | GO:0008283: cell proliferation | 9.53E-03 |
| 61 | GO:0009744: response to sucrose | 9.53E-03 |
| 62 | GO:0009846: pollen germination | 1.12E-02 |
| 63 | GO:0009793: embryo development ending in seed dormancy | 1.25E-02 |
| 64 | GO:0048367: shoot system development | 1.35E-02 |
| 65 | GO:0016569: covalent chromatin modification | 1.45E-02 |
| 66 | GO:0006414: translational elongation | 1.73E-02 |
| 67 | GO:0009845: seed germination | 1.87E-02 |
| 68 | GO:0009790: embryo development | 1.97E-02 |
| 69 | GO:0006633: fatty acid biosynthetic process | 2.08E-02 |
| 70 | GO:0006413: translational initiation | 2.12E-02 |
| 71 | GO:0040008: regulation of growth | 2.15E-02 |
| 72 | GO:0009451: RNA modification | 2.26E-02 |
| 73 | GO:0015031: protein transport | 2.98E-02 |
| 74 | GO:0009409: response to cold | 3.18E-02 |
| 75 | GO:0006970: response to osmotic stress | 3.20E-02 |
| 76 | GO:0009723: response to ethylene | 3.37E-02 |
| 77 | GO:0048366: leaf development | 3.41E-02 |
| 78 | GO:0009408: response to heat | 4.67E-02 |
| 79 | GO:0048364: root development | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004316: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity | 0.00E+00 |
| 2 | GO:0001072: transcription antitermination factor activity, RNA binding | 0.00E+00 |
| 3 | GO:0102132: 3-oxo-pimeloyl-[acp] methyl ester reductase activity | 0.00E+00 |
| 4 | GO:0042134: rRNA primary transcript binding | 0.00E+00 |
| 5 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 6 | GO:0004637: phosphoribosylamine-glycine ligase activity | 0.00E+00 |
| 7 | GO:0003735: structural constituent of ribosome | 9.78E-17 |
| 8 | GO:0003723: RNA binding | 6.21E-09 |
| 9 | GO:0003729: mRNA binding | 1.52E-07 |
| 10 | GO:0005507: copper ion binding | 3.75E-06 |
| 11 | GO:0030515: snoRNA binding | 1.02E-05 |
| 12 | GO:0044183: protein binding involved in protein folding | 3.96E-05 |
| 13 | GO:1990259: histone-glutamine methyltransferase activity | 4.04E-05 |
| 14 | GO:0008649: rRNA methyltransferase activity | 1.73E-04 |
| 15 | GO:0016149: translation release factor activity, codon specific | 2.55E-04 |
| 16 | GO:0004550: nucleoside diphosphate kinase activity | 2.55E-04 |
| 17 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.58E-04 |
| 18 | GO:0031369: translation initiation factor binding | 5.37E-04 |
| 19 | GO:0003747: translation release factor activity | 1.10E-03 |
| 20 | GO:0001055: RNA polymerase II activity | 1.22E-03 |
| 21 | GO:0051082: unfolded protein binding | 1.36E-03 |
| 22 | GO:0001054: RNA polymerase I activity | 1.49E-03 |
| 23 | GO:0001056: RNA polymerase III activity | 1.63E-03 |
| 24 | GO:0004407: histone deacetylase activity | 2.39E-03 |
| 25 | GO:0050897: cobalt ion binding | 7.49E-03 |
| 26 | GO:0003746: translation elongation factor activity | 7.99E-03 |
| 27 | GO:0003697: single-stranded DNA binding | 7.99E-03 |
| 28 | GO:0042393: histone binding | 8.75E-03 |
| 29 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.06E-02 |
| 30 | GO:0051287: NAD binding | 1.09E-02 |
| 31 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.18E-02 |
| 32 | GO:0003690: double-stranded DNA binding | 1.20E-02 |
| 33 | GO:0008026: ATP-dependent helicase activity | 1.57E-02 |
| 34 | GO:0019843: rRNA binding | 1.77E-02 |
| 35 | GO:0005525: GTP binding | 1.91E-02 |
| 36 | GO:0008565: protein transporter activity | 2.01E-02 |
| 37 | GO:0005524: ATP binding | 2.11E-02 |
| 38 | GO:0003743: translation initiation factor activity | 2.48E-02 |
| 39 | GO:0003676: nucleic acid binding | 2.58E-02 |
| 40 | GO:0003682: chromatin binding | 3.16E-02 |
| 41 | GO:0008233: peptidase activity | 3.50E-02 |
| 42 | GO:0003924: GTPase activity | 4.67E-02 |
| 43 | GO:0004519: endonuclease activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 2 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 3 | GO:0005730: nucleolus | 7.29E-24 |
| 4 | GO:0022625: cytosolic large ribosomal subunit | 4.51E-11 |
| 5 | GO:0022626: cytosolic ribosome | 4.62E-11 |
| 6 | GO:0005840: ribosome | 1.66E-09 |
| 7 | GO:0015934: large ribosomal subunit | 5.44E-09 |
| 8 | GO:0005773: vacuole | 1.50E-07 |
| 9 | GO:0005829: cytosol | 1.01E-06 |
| 10 | GO:0005774: vacuolar membrane | 3.69E-06 |
| 11 | GO:0009506: plasmodesma | 8.43E-06 |
| 12 | GO:0022627: cytosolic small ribosomal subunit | 2.23E-05 |
| 13 | GO:0015030: Cajal body | 2.74E-05 |
| 14 | GO:0071541: eukaryotic translation initiation factor 3 complex, eIF3m | 4.04E-05 |
| 15 | GO:0032040: small-subunit processome | 4.67E-05 |
| 16 | GO:0016020: membrane | 8.73E-05 |
| 17 | GO:0005758: mitochondrial intermembrane space | 9.13E-05 |
| 18 | GO:0015935: small ribosomal subunit | 1.13E-04 |
| 19 | GO:0031428: box C/D snoRNP complex | 5.37E-04 |
| 20 | GO:0016363: nuclear matrix | 6.40E-04 |
| 21 | GO:0030687: preribosome, large subunit precursor | 7.49E-04 |
| 22 | GO:0005737: cytoplasm | 7.85E-04 |
| 23 | GO:0005743: mitochondrial inner membrane | 7.95E-04 |
| 24 | GO:0005742: mitochondrial outer membrane translocase complex | 9.77E-04 |
| 25 | GO:0005763: mitochondrial small ribosomal subunit | 1.10E-03 |
| 26 | GO:0005736: DNA-directed RNA polymerase I complex | 1.10E-03 |
| 27 | GO:0005747: mitochondrial respiratory chain complex I | 1.18E-03 |
| 28 | GO:0005666: DNA-directed RNA polymerase III complex | 1.22E-03 |
| 29 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.35E-03 |
| 30 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.49E-03 |
| 31 | GO:0005739: mitochondrion | 1.56E-03 |
| 32 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.63E-03 |
| 33 | GO:0019013: viral nucleocapsid | 1.77E-03 |
| 34 | GO:0016592: mediator complex | 4.58E-03 |
| 35 | GO:0005618: cell wall | 6.05E-03 |
| 36 | GO:0009507: chloroplast | 7.42E-03 |
| 37 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.60E-02 |
| 38 | GO:0005759: mitochondrial matrix | 2.08E-02 |
| 39 | GO:0009941: chloroplast envelope | 3.05E-02 |
| 40 | GO:0009570: chloroplast stroma | 4.59E-02 |