co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G12710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045176: apical protein localization	0.00E+00
2	GO:0006154: adenosine catabolic process	0.00E+00
3	GO:1905177: tracheary element differentiation	0.00E+00
4	GO:0042493: response to drug	0.00E+00
5	GO:2000505: regulation of energy homeostasis	0.00E+00
6	GO:0007638: mechanosensory behavior	0.00E+00
7	GO:0006833: water transport	2.90E-06
8	GO:0034220: ion transmembrane transport	1.03E-05
9	GO:0009651: response to salt stress	2.92E-05
10	GO:0007165: signal transduction	4.89E-05
11	GO:0009638: phototropism	5.55E-05
12	GO:0080051: cutin transport	6.42E-05
13	GO:0006148: inosine catabolic process	6.42E-05
14	GO:0010540: basipetal auxin transport	1.23E-04
15	GO:0009825: multidimensional cell growth	1.39E-04
16	GO:0043255: regulation of carbohydrate biosynthetic process	1.55E-04
17	GO:0010541: acropetal auxin transport	1.55E-04
18	GO:0015908: fatty acid transport	1.55E-04
19	GO:0007017: microtubule-based process	1.95E-04
20	GO:0010160: formation of animal organ boundary	2.63E-04
21	GO:0010623: programmed cell death involved in cell development	2.63E-04
22	GO:0080055: low-affinity nitrate transport	2.63E-04
23	GO:2001295: malonyl-CoA biosynthetic process	2.63E-04
24	GO:0009650: UV protection	3.82E-04
25	GO:1901332: negative regulation of lateral root development	3.82E-04
26	GO:0007231: osmosensory signaling pathway	3.82E-04
27	GO:0051639: actin filament network formation	3.82E-04
28	GO:0034059: response to anoxia	3.82E-04
29	GO:0080170: hydrogen peroxide transmembrane transport	3.82E-04
30	GO:0043481: anthocyanin accumulation in tissues in response to UV light	3.82E-04
31	GO:0010508: positive regulation of autophagy	5.10E-04
32	GO:0033500: carbohydrate homeostasis	5.10E-04
33	GO:0010222: stem vascular tissue pattern formation	5.10E-04
34	GO:0051764: actin crosslink formation	5.10E-04
35	GO:0060918: auxin transport	7.90E-04
36	GO:0010337: regulation of salicylic acid metabolic process	7.90E-04
37	GO:0006751: glutathione catabolic process	7.90E-04
38	GO:0048827: phyllome development	7.90E-04
39	GO:0055085: transmembrane transport	9.39E-04
40	GO:0009612: response to mechanical stimulus	9.40E-04
41	GO:0009645: response to low light intensity stimulus	1.10E-03
42	GO:0009664: plant-type cell wall organization	1.62E-03
43	GO:0016042: lipid catabolic process	1.77E-03
44	GO:0009414: response to water deprivation	1.82E-03
45	GO:0006857: oligopeptide transport	1.85E-03
46	GO:0006032: chitin catabolic process	2.01E-03
47	GO:0010215: cellulose microfibril organization	2.01E-03
48	GO:0009684: indoleacetic acid biosynthetic process	2.21E-03
49	GO:0006816: calcium ion transport	2.21E-03
50	GO:0008361: regulation of cell size	2.42E-03
51	GO:0016024: CDP-diacylglycerol biosynthetic process	2.42E-03
52	GO:0009742: brassinosteroid mediated signaling pathway	2.60E-03
53	GO:0009785: blue light signaling pathway	2.64E-03
54	GO:0010229: inflorescence development	2.64E-03
55	GO:0010588: cotyledon vascular tissue pattern formation	2.64E-03
56	GO:0010143: cutin biosynthetic process	2.87E-03
57	GO:0010030: positive regulation of seed germination	3.09E-03
58	GO:0070588: calcium ion transmembrane transport	3.09E-03
59	GO:0010053: root epidermal cell differentiation	3.09E-03
60	GO:0010167: response to nitrate	3.09E-03
61	GO:0010025: wax biosynthetic process	3.33E-03
62	GO:0051017: actin filament bundle assembly	3.57E-03
63	GO:0009611: response to wounding	3.89E-03
64	GO:0016998: cell wall macromolecule catabolic process	4.08E-03
65	GO:0009411: response to UV	4.60E-03
66	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.60E-03
67	GO:0010089: xylem development	4.87E-03
68	GO:0048443: stamen development	4.87E-03
69	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.15E-03
70	GO:0042631: cellular response to water deprivation	5.43E-03
71	GO:0009958: positive gravitropism	5.72E-03
72	GO:0009737: response to abscisic acid	5.95E-03
73	GO:0009826: unidimensional cell growth	6.24E-03
74	GO:0048825: cotyledon development	6.31E-03
75	GO:0071554: cell wall organization or biogenesis	6.61E-03
76	GO:0009639: response to red or far red light	7.55E-03
77	GO:0009828: plant-type cell wall loosening	7.55E-03
78	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	8.31E-03
79	GO:0009911: positive regulation of flower development	8.54E-03
80	GO:0042128: nitrate assimilation	9.22E-03
81	GO:0010411: xyloglucan metabolic process	9.57E-03
82	GO:0030244: cellulose biosynthetic process	1.03E-02
83	GO:0010311: lateral root formation	1.07E-02
84	GO:0009733: response to auxin	1.07E-02
85	GO:0010218: response to far red light	1.10E-02
86	GO:0048527: lateral root development	1.14E-02
87	GO:0016051: carbohydrate biosynthetic process	1.22E-02
88	GO:0009637: response to blue light	1.22E-02
89	GO:0009753: response to jasmonic acid	1.27E-02
90	GO:0009640: photomorphogenesis	1.45E-02
91	GO:0009926: auxin polar transport	1.45E-02
92	GO:0042546: cell wall biogenesis	1.50E-02
93	GO:0006810: transport	1.51E-02
94	GO:0009734: auxin-activated signaling pathway	1.68E-02
95	GO:0009809: lignin biosynthetic process	1.80E-02
96	GO:0009585: red, far-red light phototransduction	1.80E-02
97	GO:0009416: response to light stimulus	2.11E-02
98	GO:0009624: response to nematode	2.31E-02
99	GO:0006633: fatty acid biosynthetic process	3.19E-02
100	GO:0045490: pectin catabolic process	3.41E-02
101	GO:0007166: cell surface receptor signaling pathway	3.75E-02

Rank	GO Term	Adjusted P value
1	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
2	GO:0004871: signal transducer activity	1.74E-05
3	GO:0015250: water channel activity	3.08E-05
4	GO:0015245: fatty acid transporter activity	6.42E-05
5	GO:0047622: adenosine nucleosidase activity	6.42E-05
6	GO:0004565: beta-galactosidase activity	1.07E-04
7	GO:0003839: gamma-glutamylcyclotransferase activity	1.55E-04
8	GO:0047724: inosine nucleosidase activity	1.55E-04
9	GO:0004075: biotin carboxylase activity	2.63E-04
10	GO:0080054: low-affinity nitrate transmembrane transporter activity	2.63E-04
11	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	3.82E-04
12	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	5.10E-04
13	GO:0005200: structural constituent of cytoskeleton	5.65E-04
14	GO:0004040: amidase activity	6.45E-04
15	GO:0003989: acetyl-CoA carboxylase activity	6.45E-04
16	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	6.80E-04
17	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	7.90E-04
18	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	7.90E-04
19	GO:0004629: phospholipase C activity	7.90E-04
20	GO:0005096: GTPase activator activity	8.54E-04
21	GO:0004017: adenylate kinase activity	9.40E-04
22	GO:0004435: phosphatidylinositol phospholipase C activity	9.40E-04
23	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	1.62E-03
24	GO:0003924: GTPase activity	1.84E-03
25	GO:0004568: chitinase activity	2.01E-03
26	GO:0015020: glucuronosyltransferase activity	2.01E-03
27	GO:0010329: auxin efflux transmembrane transporter activity	2.64E-03
28	GO:0005262: calcium channel activity	2.64E-03
29	GO:0030570: pectate lyase activity	4.60E-03
30	GO:0005516: calmodulin binding	6.36E-03
31	GO:0016788: hydrolase activity, acting on ester bonds	6.60E-03
32	GO:0016762: xyloglucan:xyloglucosyl transferase activity	6.61E-03
33	GO:0005525: GTP binding	7.12E-03
34	GO:0051015: actin filament binding	7.24E-03
35	GO:0016791: phosphatase activity	7.55E-03
36	GO:0016413: O-acetyltransferase activity	8.21E-03
37	GO:0052689: carboxylic ester hydrolase activity	8.88E-03
38	GO:0008375: acetylglucosaminyltransferase activity	9.22E-03
39	GO:0030247: polysaccharide binding	9.57E-03
40	GO:0016798: hydrolase activity, acting on glycosyl bonds	9.57E-03
41	GO:0005215: transporter activity	1.05E-02
42	GO:0030145: manganese ion binding	1.14E-02
43	GO:0003993: acid phosphatase activity	1.25E-02
44	GO:0015293: symporter activity	1.58E-02
45	GO:0031625: ubiquitin protein ligase binding	1.93E-02
46	GO:0045735: nutrient reservoir activity	2.02E-02
47	GO:0016746: transferase activity, transferring acyl groups	2.36E-02
48	GO:0016829: lyase activity	2.86E-02
49	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.24E-02

Rank	GO Term	Adjusted P value
1	GO:0009930: longitudinal side of cell surface	0.00E+00
2	GO:0005886: plasma membrane	2.34E-09
3	GO:0009897: external side of plasma membrane	9.10E-07
4	GO:0009505: plant-type cell wall	1.07E-05
5	GO:0048046: apoplast	2.15E-04
6	GO:0016328: lateral plasma membrane	2.63E-04
7	GO:0005618: cell wall	2.66E-04
8	GO:0015630: microtubule cytoskeleton	3.82E-04
9	GO:0009531: secondary cell wall	3.82E-04
10	GO:0032432: actin filament bundle	3.82E-04
11	GO:0005887: integral component of plasma membrane	4.36E-04
12	GO:0045298: tubulin complex	1.62E-03
13	GO:0005576: extracellular region	1.82E-03
14	GO:0005884: actin filament	2.21E-03
15	GO:0030095: chloroplast photosystem II	2.87E-03
16	GO:0005875: microtubule associated complex	3.33E-03
17	GO:0009654: photosystem II oxygen evolving complex	3.82E-03
18	GO:0046658: anchored component of plasma membrane	5.55E-03
19	GO:0005770: late endosome	5.72E-03
20	GO:0019898: extrinsic component of membrane	6.31E-03
21	GO:0005874: microtubule	7.76E-03
22	GO:0016020: membrane	1.35E-02
23	GO:0031977: thylakoid lumen	1.37E-02
24	GO:0005834: heterotrimeric G-protein complex	2.12E-02
25	GO:0005773: vacuole	2.35E-02
26	GO:0009534: chloroplast thylakoid	2.56E-02
27	GO:0009543: chloroplast thylakoid lumen	2.71E-02
28	GO:0009570: chloroplast stroma	3.21E-02
29	GO:0009506: plasmodesma	3.29E-02
30	GO:0031225: anchored component of membrane	3.30E-02