co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G11820

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045792: negative regulation of cell size	0.00E+00
2	GO:0006468: protein phosphorylation	2.86E-15
3	GO:0042742: defense response to bacterium	1.89E-09
4	GO:0006952: defense response	5.89E-08
5	GO:0007166: cell surface receptor signaling pathway	1.59E-07
6	GO:0010200: response to chitin	1.36E-06
7	GO:0006517: protein deglycosylation	1.15E-05
8	GO:0015696: ammonium transport	2.59E-05
9	GO:0048194: Golgi vesicle budding	2.59E-05
10	GO:0009617: response to bacterium	3.35E-05
11	GO:0009626: plant-type hypersensitive response	4.38E-05
12	GO:0009816: defense response to bacterium, incompatible interaction	4.44E-05
13	GO:0060548: negative regulation of cell death	4.69E-05
14	GO:0072488: ammonium transmembrane transport	4.69E-05
15	GO:0070588: calcium ion transmembrane transport	5.91E-05
16	GO:0010942: positive regulation of cell death	1.09E-04
17	GO:0050832: defense response to fungus	1.52E-04
18	GO:0070370: cellular heat acclimation	1.96E-04
19	GO:0009751: response to salicylic acid	2.62E-04
20	GO:0009609: response to symbiotic bacterium	2.63E-04
21	GO:0046938: phytochelatin biosynthetic process	2.63E-04
22	GO:0006643: membrane lipid metabolic process	2.63E-04
23	GO:0055081: anion homeostasis	2.63E-04
24	GO:0006680: glucosylceramide catabolic process	2.63E-04
25	GO:0060862: negative regulation of floral organ abscission	2.63E-04
26	GO:0051245: negative regulation of cellular defense response	2.63E-04
27	GO:0043562: cellular response to nitrogen levels	3.06E-04
28	GO:0046685: response to arsenic-containing substance	3.70E-04
29	GO:0043069: negative regulation of programmed cell death	5.12E-04
30	GO:0006212: uracil catabolic process	5.78E-04
31	GO:0031349: positive regulation of defense response	5.78E-04
32	GO:0052542: defense response by callose deposition	5.78E-04
33	GO:0051258: protein polymerization	5.78E-04
34	GO:0019483: beta-alanine biosynthetic process	5.78E-04
35	GO:0010541: acropetal auxin transport	5.78E-04
36	GO:0051252: regulation of RNA metabolic process	5.78E-04
37	GO:0002221: pattern recognition receptor signaling pathway	5.78E-04
38	GO:0046740: transport of virus in host, cell to cell	5.78E-04
39	GO:0015914: phospholipid transport	5.78E-04
40	GO:2000072: regulation of defense response to fungus, incompatible interaction	5.78E-04
41	GO:0080185: effector dependent induction by symbiont of host immune response	5.78E-04
42	GO:0010618: aerenchyma formation	5.78E-04
43	GO:0080181: lateral root branching	5.78E-04
44	GO:0009817: defense response to fungus, incompatible interaction	6.87E-04
45	GO:0008219: cell death	6.87E-04
46	GO:0034605: cellular response to heat	8.62E-04
47	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	9.39E-04
48	GO:0042344: indole glucosinolate catabolic process	9.39E-04
49	GO:0055074: calcium ion homeostasis	9.39E-04
50	GO:1900140: regulation of seedling development	9.39E-04
51	GO:0048281: inflorescence morphogenesis	9.39E-04
52	GO:0015695: organic cation transport	9.39E-04
53	GO:0006887: exocytosis	1.14E-03
54	GO:0072583: clathrin-dependent endocytosis	1.34E-03
55	GO:0006516: glycoprotein catabolic process	1.34E-03
56	GO:0015700: arsenite transport	1.34E-03
57	GO:0006612: protein targeting to membrane	1.34E-03
58	GO:0002679: respiratory burst involved in defense response	1.34E-03
59	GO:0071323: cellular response to chitin	1.34E-03
60	GO:0006515: misfolded or incompletely synthesized protein catabolic process	1.34E-03
61	GO:0010071: root meristem specification	1.34E-03
62	GO:0070301: cellular response to hydrogen peroxide	1.34E-03
63	GO:0043207: response to external biotic stimulus	1.34E-03
64	GO:0031348: negative regulation of defense response	1.56E-03
65	GO:0010508: positive regulation of autophagy	1.79E-03
66	GO:0010188: response to microbial phytotoxin	1.79E-03
67	GO:0080142: regulation of salicylic acid biosynthetic process	1.79E-03
68	GO:0010363: regulation of plant-type hypersensitive response	1.79E-03
69	GO:0000304: response to singlet oxygen	2.29E-03
70	GO:0046283: anthocyanin-containing compound metabolic process	2.29E-03
71	GO:0031365: N-terminal protein amino acid modification	2.29E-03
72	GO:0061025: membrane fusion	2.50E-03
73	GO:0009620: response to fungus	2.57E-03
74	GO:0006623: protein targeting to vacuole	2.68E-03
75	GO:0010337: regulation of salicylic acid metabolic process	2.82E-03
76	GO:0046777: protein autophosphorylation	3.23E-03
77	GO:0000911: cytokinesis by cell plate formation	3.40E-03
78	GO:0009612: response to mechanical stimulus	3.40E-03
79	GO:0010555: response to mannitol	3.40E-03
80	GO:0010310: regulation of hydrogen peroxide metabolic process	3.40E-03
81	GO:2000067: regulation of root morphogenesis	3.40E-03
82	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.40E-03
83	GO:0006904: vesicle docking involved in exocytosis	3.68E-03
84	GO:0010044: response to aluminum ion	4.00E-03
85	GO:0010161: red light signaling pathway	4.00E-03
86	GO:0009610: response to symbiotic fungus	4.00E-03
87	GO:0006955: immune response	4.00E-03
88	GO:0046470: phosphatidylcholine metabolic process	4.00E-03
89	GO:0043090: amino acid import	4.00E-03
90	GO:0071446: cellular response to salicylic acid stimulus	4.00E-03
91	GO:0006886: intracellular protein transport	4.03E-03
92	GO:0009627: systemic acquired resistance	4.61E-03
93	GO:0030162: regulation of proteolysis	4.65E-03
94	GO:0006491: N-glycan processing	4.65E-03
95	GO:0010078: maintenance of root meristem identity	4.65E-03
96	GO:0010492: maintenance of shoot apical meristem identity	4.65E-03
97	GO:0007186: G-protein coupled receptor signaling pathway	5.32E-03
98	GO:0010120: camalexin biosynthetic process	5.32E-03
99	GO:0010204: defense response signaling pathway, resistance gene-independent	5.32E-03
100	GO:2000031: regulation of salicylic acid mediated signaling pathway	5.32E-03
101	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	5.32E-03
102	GO:0010311: lateral root formation	5.67E-03
103	GO:0051865: protein autoubiquitination	6.03E-03
104	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.77E-03
105	GO:0045087: innate immune response	6.83E-03
106	GO:0006995: cellular response to nitrogen starvation	7.54E-03
107	GO:0007064: mitotic sister chromatid cohesion	7.54E-03
108	GO:0006032: chitin catabolic process	7.54E-03
109	GO:0010215: cellulose microfibril organization	7.54E-03
110	GO:0052544: defense response by callose deposition in cell wall	8.35E-03
111	GO:0019684: photosynthesis, light reaction	8.35E-03
112	GO:0009750: response to fructose	8.35E-03
113	GO:0030148: sphingolipid biosynthetic process	8.35E-03
114	GO:0051707: response to other organism	8.82E-03
115	GO:0016925: protein sumoylation	9.17E-03
116	GO:0071365: cellular response to auxin stimulus	9.17E-03
117	GO:0000266: mitochondrial fission	9.17E-03
118	GO:0012501: programmed cell death	9.17E-03
119	GO:0006807: nitrogen compound metabolic process	1.00E-02
120	GO:0031347: regulation of defense response	1.07E-02
121	GO:0009863: salicylic acid mediated signaling pathway	1.38E-02
122	GO:0006874: cellular calcium ion homeostasis	1.48E-02
123	GO:0048278: vesicle docking	1.58E-02
124	GO:0016998: cell wall macromolecule catabolic process	1.58E-02
125	GO:0009814: defense response, incompatible interaction	1.68E-02
126	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.68E-02
127	GO:0009624: response to nematode	1.70E-02
128	GO:0018105: peptidyl-serine phosphorylation	1.75E-02
129	GO:0071215: cellular response to abscisic acid stimulus	1.79E-02
130	GO:0006284: base-excision repair	1.90E-02
131	GO:0042391: regulation of membrane potential	2.13E-02
132	GO:0080022: primary root development	2.13E-02
133	GO:0000413: protein peptidyl-prolyl isomerization	2.13E-02
134	GO:0042631: cellular response to water deprivation	2.13E-02
135	GO:0008360: regulation of cell shape	2.24E-02
136	GO:0010197: polar nucleus fusion	2.24E-02
137	GO:0046323: glucose import	2.24E-02
138	GO:0048544: recognition of pollen	2.36E-02
139	GO:0010183: pollen tube guidance	2.48E-02
140	GO:0009749: response to glucose	2.48E-02
141	GO:0002229: defense response to oomycetes	2.61E-02
142	GO:0010193: response to ozone	2.61E-02
143	GO:0000302: response to reactive oxygen species	2.61E-02
144	GO:0006891: intra-Golgi vesicle-mediated transport	2.61E-02
145	GO:0030163: protein catabolic process	2.86E-02
146	GO:0051607: defense response to virus	3.25E-02
147	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.29E-02
148	GO:0006470: protein dephosphorylation	3.36E-02
149	GO:0001666: response to hypoxia	3.39E-02
150	GO:0009615: response to virus	3.39E-02
151	GO:0010468: regulation of gene expression	3.51E-02
152	GO:0009607: response to biotic stimulus	3.52E-02
153	GO:0006979: response to oxidative stress	3.63E-02
154	GO:0006906: vesicle fusion	3.66E-02
155	GO:0048573: photoperiodism, flowering	3.80E-02
156	GO:0016049: cell growth	3.95E-02
157	GO:0009737: response to abscisic acid	4.14E-02
158	GO:0009738: abscisic acid-activated signaling pathway	4.25E-02
159	GO:0006499: N-terminal protein myristoylation	4.38E-02
160	GO:0048527: lateral root development	4.53E-02
161	GO:0010119: regulation of stomatal movement	4.53E-02
162	GO:0006865: amino acid transport	4.69E-02
163	GO:0009867: jasmonic acid mediated signaling pathway	4.84E-02
164	GO:0006970: response to osmotic stress	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group	0.00E+00
2	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
3	GO:0052822: DNA-3-methylguanine glycosylase activity	0.00E+00
4	GO:0043916: DNA-7-methylguanine glycosylase activity	0.00E+00
5	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
6	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
7	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
8	GO:0052821: DNA-7-methyladenine glycosylase activity	0.00E+00
9	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
10	GO:0015370: solute:sodium symporter activity	0.00E+00
11	GO:0003905: alkylbase DNA N-glycosylase activity	0.00E+00
12	GO:0003837: beta-ureidopropionase activity	0.00E+00
13	GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity	0.00E+00
14	GO:0016301: kinase activity	5.77E-13
15	GO:0005524: ATP binding	6.26E-11
16	GO:0004674: protein serine/threonine kinase activity	1.53E-07
17	GO:0005516: calmodulin binding	3.65E-07
18	GO:0004012: phospholipid-translocating ATPase activity	2.31E-06
19	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.71E-05
20	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.04E-05
21	GO:0005388: calcium-transporting ATPase activity	4.04E-05
22	GO:0008519: ammonium transmembrane transporter activity	1.09E-04
23	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.48E-04
24	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	2.63E-04
25	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	2.63E-04
26	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	2.63E-04
27	GO:0004348: glucosylceramidase activity	2.63E-04
28	GO:0071992: phytochelatin transmembrane transporter activity	2.63E-04
29	GO:0015168: glycerol transmembrane transporter activity	2.63E-04
30	GO:0032050: clathrin heavy chain binding	2.63E-04
31	GO:1901149: salicylic acid binding	2.63E-04
32	GO:0015085: calcium ion transmembrane transporter activity	2.63E-04
33	GO:0046870: cadmium ion binding	2.63E-04
34	GO:0004713: protein tyrosine kinase activity	5.12E-04
35	GO:0008428: ribonuclease inhibitor activity	5.78E-04
36	GO:0001671: ATPase activator activity	5.78E-04
37	GO:0045140: inositol phosphoceramide synthase activity	5.78E-04
38	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	5.78E-04
39	GO:0030247: polysaccharide binding	6.03E-04
40	GO:0005509: calcium ion binding	8.73E-04
41	GO:0031683: G-protein beta/gamma-subunit complex binding	9.39E-04
42	GO:0001664: G-protein coupled receptor binding	9.39E-04
43	GO:0004190: aspartic-type endopeptidase activity	9.62E-04
44	GO:0005354: galactose transmembrane transporter activity	1.34E-03
45	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.34E-03
46	GO:0033612: receptor serine/threonine kinase binding	1.43E-03
47	GO:0030246: carbohydrate binding	1.57E-03
48	GO:0019199: transmembrane receptor protein kinase activity	1.79E-03
49	GO:0015204: urea transmembrane transporter activity	1.79E-03
50	GO:0008948: oxaloacetate decarboxylase activity	2.29E-03
51	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.29E-03
52	GO:0031386: protein tag	2.29E-03
53	GO:0008725: DNA-3-methyladenine glycosylase activity	2.29E-03
54	GO:0015145: monosaccharide transmembrane transporter activity	2.29E-03
55	GO:0004672: protein kinase activity	2.41E-03
56	GO:0008235: metalloexopeptidase activity	4.00E-03
57	GO:0042803: protein homodimerization activity	4.13E-03
58	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.61E-03
59	GO:0004806: triglyceride lipase activity	4.87E-03
60	GO:0004683: calmodulin-dependent protein kinase activity	4.87E-03
61	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.87E-03
62	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	5.32E-03
63	GO:0003843: 1,3-beta-D-glucan synthase activity	5.32E-03
64	GO:0004630: phospholipase D activity	5.32E-03
65	GO:0071949: FAD binding	6.03E-03
66	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	6.03E-03
67	GO:0005515: protein binding	6.59E-03
68	GO:0004568: chitinase activity	7.54E-03
69	GO:0004177: aminopeptidase activity	8.35E-03
70	GO:0005484: SNAP receptor activity	8.82E-03
71	GO:0000287: magnesium ion binding	9.84E-03
72	GO:0015293: symporter activity	9.92E-03
73	GO:0005262: calcium channel activity	1.00E-02
74	GO:0008061: chitin binding	1.18E-02
75	GO:0003712: transcription cofactor activity	1.18E-02
76	GO:0005217: intracellular ligand-gated ion channel activity	1.18E-02
77	GO:0004970: ionotropic glutamate receptor activity	1.18E-02
78	GO:0030552: cAMP binding	1.18E-02
79	GO:0030553: cGMP binding	1.18E-02
80	GO:0031625: ubiquitin protein ligase binding	1.32E-02
81	GO:0003954: NADH dehydrogenase activity	1.38E-02
82	GO:0005216: ion channel activity	1.48E-02
83	GO:0051087: chaperone binding	1.48E-02
84	GO:0043424: protein histidine kinase binding	1.48E-02
85	GO:0004871: signal transducer activity	1.77E-02
86	GO:0008810: cellulase activity	1.79E-02
87	GO:0030551: cyclic nucleotide binding	2.13E-02
88	GO:0005249: voltage-gated potassium channel activity	2.13E-02
89	GO:0001085: RNA polymerase II transcription factor binding	2.24E-02
90	GO:0005355: glucose transmembrane transporter activity	2.36E-02
91	GO:0046872: metal ion binding	3.29E-02
92	GO:0051213: dioxygenase activity	3.39E-02
93	GO:0016887: ATPase activity	3.75E-02
94	GO:0004721: phosphoprotein phosphatase activity	3.80E-02
95	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.53E-02
96	GO:0003682: chromatin binding	4.79E-02
97	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.74E-22
2	GO:0016021: integral component of membrane	1.23E-08
3	GO:0005887: integral component of plasma membrane	1.50E-05
4	GO:0070062: extracellular exosome	2.59E-05
5	GO:0009506: plasmodesma	2.00E-04
6	GO:0017119: Golgi transport complex	5.12E-04
7	GO:0030125: clathrin vesicle coat	5.12E-04
8	GO:0031304: intrinsic component of mitochondrial inner membrane	5.78E-04
9	GO:0031902: late endosome membrane	1.14E-03
10	GO:0009504: cell plate	2.68E-03
11	GO:0000145: exocyst	3.06E-03
12	GO:0030131: clathrin adaptor complex	4.65E-03
13	GO:0000148: 1,3-beta-D-glucan synthase complex	5.32E-03
14	GO:0019005: SCF ubiquitin ligase complex	5.39E-03
15	GO:0005773: vacuole	6.33E-03
16	GO:0030665: clathrin-coated vesicle membrane	6.77E-03
17	GO:0005789: endoplasmic reticulum membrane	8.09E-03
18	GO:0005795: Golgi stack	1.18E-02
19	GO:0005905: clathrin-coated pit	1.58E-02
20	GO:0019898: extrinsic component of membrane	2.48E-02
21	GO:0005802: trans-Golgi network	2.55E-02
22	GO:0071944: cell periphery	2.86E-02
23	GO:0016020: membrane	3.35E-02
24	GO:0005788: endoplasmic reticulum lumen	3.52E-02
25	GO:0005667: transcription factor complex	3.66E-02
26	GO:0005774: vacuolar membrane	3.81E-02
27	GO:0046658: anchored component of plasma membrane	3.89E-02
28	GO:0000151: ubiquitin ligase complex	4.09E-02