GO Enrichment Analysis of Co-expressed Genes with
AT3G10940
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 2 | GO:0045860: positive regulation of protein kinase activity | 0.00E+00 |
| 3 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 4 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 5 | GO:0071482: cellular response to light stimulus | 6.52E-07 |
| 6 | GO:0010021: amylopectin biosynthetic process | 7.97E-06 |
| 7 | GO:0009913: epidermal cell differentiation | 2.01E-05 |
| 8 | GO:0008610: lipid biosynthetic process | 5.09E-05 |
| 9 | GO:0043266: regulation of potassium ion transport | 9.33E-05 |
| 10 | GO:0010480: microsporocyte differentiation | 9.33E-05 |
| 11 | GO:2000021: regulation of ion homeostasis | 9.33E-05 |
| 12 | GO:0010028: xanthophyll cycle | 9.33E-05 |
| 13 | GO:0019646: aerobic electron transport chain | 9.33E-05 |
| 14 | GO:0006824: cobalt ion transport | 9.33E-05 |
| 15 | GO:0051775: response to redox state | 9.33E-05 |
| 16 | GO:0008152: metabolic process | 9.69E-05 |
| 17 | GO:0016122: xanthophyll metabolic process | 2.20E-04 |
| 18 | GO:0010289: homogalacturonan biosynthetic process | 2.20E-04 |
| 19 | GO:0010270: photosystem II oxygen evolving complex assembly | 2.20E-04 |
| 20 | GO:0034755: iron ion transmembrane transport | 2.20E-04 |
| 21 | GO:0006518: peptide metabolic process | 3.67E-04 |
| 22 | GO:0005977: glycogen metabolic process | 3.67E-04 |
| 23 | GO:0046686: response to cadmium ion | 4.66E-04 |
| 24 | GO:0018105: peptidyl-serine phosphorylation | 4.91E-04 |
| 25 | GO:0046836: glycolipid transport | 5.28E-04 |
| 26 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 5.28E-04 |
| 27 | GO:0006107: oxaloacetate metabolic process | 5.28E-04 |
| 28 | GO:0019252: starch biosynthetic process | 6.66E-04 |
| 29 | GO:0031122: cytoplasmic microtubule organization | 7.02E-04 |
| 30 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 7.02E-04 |
| 31 | GO:0006734: NADH metabolic process | 7.02E-04 |
| 32 | GO:0015994: chlorophyll metabolic process | 7.02E-04 |
| 33 | GO:0048497: maintenance of floral organ identity | 8.88E-04 |
| 34 | GO:0010438: cellular response to sulfur starvation | 8.88E-04 |
| 35 | GO:0016120: carotene biosynthetic process | 8.88E-04 |
| 36 | GO:0009759: indole glucosinolate biosynthetic process | 1.08E-03 |
| 37 | GO:0042549: photosystem II stabilization | 1.08E-03 |
| 38 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.08E-03 |
| 39 | GO:0006828: manganese ion transport | 1.08E-03 |
| 40 | GO:0042372: phylloquinone biosynthetic process | 1.29E-03 |
| 41 | GO:0009854: oxidative photosynthetic carbon pathway | 1.29E-03 |
| 42 | GO:0009416: response to light stimulus | 1.39E-03 |
| 43 | GO:0048437: floral organ development | 1.51E-03 |
| 44 | GO:0005975: carbohydrate metabolic process | 1.87E-03 |
| 45 | GO:0046777: protein autophosphorylation | 2.29E-03 |
| 46 | GO:0006535: cysteine biosynthetic process from serine | 2.80E-03 |
| 47 | GO:0045036: protein targeting to chloroplast | 2.80E-03 |
| 48 | GO:0019538: protein metabolic process | 2.80E-03 |
| 49 | GO:1903507: negative regulation of nucleic acid-templated transcription | 3.09E-03 |
| 50 | GO:0048229: gametophyte development | 3.09E-03 |
| 51 | GO:0000038: very long-chain fatty acid metabolic process | 3.09E-03 |
| 52 | GO:0006816: calcium ion transport | 3.09E-03 |
| 53 | GO:0009773: photosynthetic electron transport in photosystem I | 3.09E-03 |
| 54 | GO:0002213: defense response to insect | 3.38E-03 |
| 55 | GO:0006108: malate metabolic process | 3.69E-03 |
| 56 | GO:0018107: peptidyl-threonine phosphorylation | 3.69E-03 |
| 57 | GO:0009718: anthocyanin-containing compound biosynthetic process | 3.69E-03 |
| 58 | GO:0010075: regulation of meristem growth | 3.69E-03 |
| 59 | GO:0010102: lateral root morphogenesis | 3.69E-03 |
| 60 | GO:0009934: regulation of meristem structural organization | 4.01E-03 |
| 61 | GO:0000162: tryptophan biosynthetic process | 4.67E-03 |
| 62 | GO:0019344: cysteine biosynthetic process | 5.01E-03 |
| 63 | GO:0008299: isoprenoid biosynthetic process | 5.36E-03 |
| 64 | GO:0016575: histone deacetylation | 5.36E-03 |
| 65 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 6.09E-03 |
| 66 | GO:0035556: intracellular signal transduction | 7.64E-03 |
| 67 | GO:0048653: anther development | 7.65E-03 |
| 68 | GO:0042631: cellular response to water deprivation | 7.65E-03 |
| 69 | GO:0042335: cuticle development | 7.65E-03 |
| 70 | GO:0048825: cotyledon development | 8.90E-03 |
| 71 | GO:0009791: post-embryonic development | 8.90E-03 |
| 72 | GO:1901657: glycosyl compound metabolic process | 1.02E-02 |
| 73 | GO:0010027: thylakoid membrane organization | 1.21E-02 |
| 74 | GO:0016126: sterol biosynthetic process | 1.21E-02 |
| 75 | GO:0009816: defense response to bacterium, incompatible interaction | 1.26E-02 |
| 76 | GO:0080167: response to karrikin | 1.32E-02 |
| 77 | GO:0015995: chlorophyll biosynthetic process | 1.36E-02 |
| 78 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.37E-02 |
| 79 | GO:0009817: defense response to fungus, incompatible interaction | 1.46E-02 |
| 80 | GO:0045454: cell redox homeostasis | 1.59E-02 |
| 81 | GO:0016051: carbohydrate biosynthetic process | 1.73E-02 |
| 82 | GO:0009853: photorespiration | 1.73E-02 |
| 83 | GO:0006099: tricarboxylic acid cycle | 1.78E-02 |
| 84 | GO:0016042: lipid catabolic process | 1.90E-02 |
| 85 | GO:0006631: fatty acid metabolic process | 1.95E-02 |
| 86 | GO:0009753: response to jasmonic acid | 2.10E-02 |
| 87 | GO:0031347: regulation of defense response | 2.37E-02 |
| 88 | GO:0042538: hyperosmotic salinity response | 2.43E-02 |
| 89 | GO:0055114: oxidation-reduction process | 2.87E-02 |
| 90 | GO:0045893: positive regulation of transcription, DNA-templated | 3.98E-02 |
| 91 | GO:0009845: seed germination | 4.07E-02 |
| 92 | GO:0055085: transmembrane transport | 4.39E-02 |
| 93 | GO:0006633: fatty acid biosynthetic process | 4.53E-02 |
| 94 | GO:0010228: vegetative to reproductive phase transition of meristem | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 2 | GO:0004676: 3-phosphoinositide-dependent protein kinase activity | 0.00E+00 |
| 3 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 4 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 5 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 6 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 7 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 8 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 9 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 10 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 11 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 12 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 13 | GO:0051861: glycolipid binding | 7.97E-06 |
| 14 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 2.87E-05 |
| 15 | GO:0004856: xylulokinase activity | 9.33E-05 |
| 16 | GO:0008568: microtubule-severing ATPase activity | 9.33E-05 |
| 17 | GO:0004163: diphosphomevalonate decarboxylase activity | 9.33E-05 |
| 18 | GO:0008746: NAD(P)+ transhydrogenase activity | 9.33E-05 |
| 19 | GO:0030941: chloroplast targeting sequence binding | 9.33E-05 |
| 20 | GO:0050139: nicotinate-N-glucosyltransferase activity | 9.33E-05 |
| 21 | GO:0019156: isoamylase activity | 2.20E-04 |
| 22 | GO:0050017: L-3-cyanoalanine synthase activity | 2.20E-04 |
| 23 | GO:0033201: alpha-1,4-glucan synthase activity | 2.20E-04 |
| 24 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 3.67E-04 |
| 25 | GO:0070402: NADPH binding | 3.67E-04 |
| 26 | GO:0004373: glycogen (starch) synthase activity | 3.67E-04 |
| 27 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.67E-04 |
| 28 | GO:0048487: beta-tubulin binding | 5.28E-04 |
| 29 | GO:0017089: glycolipid transporter activity | 5.28E-04 |
| 30 | GO:0019201: nucleotide kinase activity | 5.28E-04 |
| 31 | GO:0009011: starch synthase activity | 7.02E-04 |
| 32 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 7.02E-04 |
| 33 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 8.88E-04 |
| 34 | GO:0004556: alpha-amylase activity | 1.08E-03 |
| 35 | GO:0016615: malate dehydrogenase activity | 1.08E-03 |
| 36 | GO:0042578: phosphoric ester hydrolase activity | 1.08E-03 |
| 37 | GO:0004017: adenylate kinase activity | 1.29E-03 |
| 38 | GO:0004124: cysteine synthase activity | 1.29E-03 |
| 39 | GO:0070300: phosphatidic acid binding | 1.29E-03 |
| 40 | GO:0030060: L-malate dehydrogenase activity | 1.29E-03 |
| 41 | GO:0004033: aldo-keto reductase (NADP) activity | 1.75E-03 |
| 42 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 2.00E-03 |
| 43 | GO:0005381: iron ion transmembrane transporter activity | 2.52E-03 |
| 44 | GO:0005384: manganese ion transmembrane transporter activity | 2.52E-03 |
| 45 | GO:0016301: kinase activity | 2.71E-03 |
| 46 | GO:0016787: hydrolase activity | 3.42E-03 |
| 47 | GO:0005524: ATP binding | 3.62E-03 |
| 48 | GO:0015095: magnesium ion transmembrane transporter activity | 3.69E-03 |
| 49 | GO:0008266: poly(U) RNA binding | 4.01E-03 |
| 50 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 4.67E-03 |
| 51 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 4.67E-03 |
| 52 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 4.67E-03 |
| 53 | GO:0003954: NADH dehydrogenase activity | 5.01E-03 |
| 54 | GO:0004407: histone deacetylase activity | 5.01E-03 |
| 55 | GO:0003714: transcription corepressor activity | 5.01E-03 |
| 56 | GO:0033612: receptor serine/threonine kinase binding | 5.72E-03 |
| 57 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 6.09E-03 |
| 58 | GO:0016491: oxidoreductase activity | 6.14E-03 |
| 59 | GO:0004672: protein kinase activity | 7.24E-03 |
| 60 | GO:0016853: isomerase activity | 8.47E-03 |
| 61 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 8.74E-03 |
| 62 | GO:0042802: identical protein binding | 8.74E-03 |
| 63 | GO:0048038: quinone binding | 9.33E-03 |
| 64 | GO:0016788: hydrolase activity, acting on ester bonds | 1.09E-02 |
| 65 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.31E-02 |
| 66 | GO:0004721: phosphoprotein phosphatase activity | 1.36E-02 |
| 67 | GO:0004683: calmodulin-dependent protein kinase activity | 1.36E-02 |
| 68 | GO:0102483: scopolin beta-glucosidase activity | 1.36E-02 |
| 69 | GO:0004674: protein serine/threonine kinase activity | 1.45E-02 |
| 70 | GO:0052689: carboxylic ester hydrolase activity | 1.46E-02 |
| 71 | GO:0004222: metalloendopeptidase activity | 1.56E-02 |
| 72 | GO:0005509: calcium ion binding | 1.58E-02 |
| 73 | GO:0050897: cobalt ion binding | 1.62E-02 |
| 74 | GO:0030145: manganese ion binding | 1.62E-02 |
| 75 | GO:0003746: translation elongation factor activity | 1.73E-02 |
| 76 | GO:0008422: beta-glucosidase activity | 1.84E-02 |
| 77 | GO:0043621: protein self-association | 2.18E-02 |
| 78 | GO:0035091: phosphatidylinositol binding | 2.18E-02 |
| 79 | GO:0051287: NAD binding | 2.37E-02 |
| 80 | GO:0008289: lipid binding | 2.72E-02 |
| 81 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.08E-02 |
| 82 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.08E-02 |
| 83 | GO:0016746: transferase activity, transferring acyl groups | 3.35E-02 |
| 84 | GO:0030170: pyridoxal phosphate binding | 4.15E-02 |
| 85 | GO:0005507: copper ion binding | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 6.69E-19 |
| 3 | GO:0009570: chloroplast stroma | 1.94E-08 |
| 4 | GO:0009941: chloroplast envelope | 2.54E-08 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 5.34E-08 |
| 6 | GO:0009534: chloroplast thylakoid | 3.64E-07 |
| 7 | GO:0031304: intrinsic component of mitochondrial inner membrane | 2.20E-04 |
| 8 | GO:0010287: plastoglobule | 5.87E-04 |
| 9 | GO:0031359: integral component of chloroplast outer membrane | 1.51E-03 |
| 10 | GO:0009501: amyloplast | 1.75E-03 |
| 11 | GO:0031969: chloroplast membrane | 2.11E-03 |
| 12 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.25E-03 |
| 13 | GO:0030095: chloroplast photosystem II | 4.01E-03 |
| 14 | GO:0005777: peroxisome | 8.49E-03 |
| 15 | GO:0009579: thylakoid | 8.94E-03 |
| 16 | GO:0009707: chloroplast outer membrane | 1.46E-02 |
| 17 | GO:0031977: thylakoid lumen | 1.95E-02 |
| 18 | GO:0048046: apoplast | 2.82E-02 |
| 19 | GO:0005747: mitochondrial respiratory chain complex I | 2.94E-02 |
| 20 | GO:0009706: chloroplast inner membrane | 3.28E-02 |
| 21 | GO:0009543: chloroplast thylakoid lumen | 3.85E-02 |
| 22 | GO:0005759: mitochondrial matrix | 4.53E-02 |
| 23 | GO:0009705: plant-type vacuole membrane | 4.84E-02 |