Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G10640

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
2GO:0010942: positive regulation of cell death2.33E-06
3GO:0060862: negative regulation of floral organ abscission2.53E-05
4GO:0055081: anion homeostasis2.53E-05
5GO:0070588: calcium ion transmembrane transport3.59E-05
6GO:0010167: response to nitrate3.59E-05
7GO:0046740: transport of virus in host, cell to cell6.44E-05
8GO:0015914: phospholipid transport6.44E-05
9GO:0080185: effector dependent induction by symbiont of host immune response6.44E-05
10GO:0010618: aerenchyma formation6.44E-05
11GO:0006212: uracil catabolic process6.44E-05
12GO:0031349: positive regulation of defense response6.44E-05
13GO:0019483: beta-alanine biosynthetic process6.44E-05
14GO:0055074: calcium ion homeostasis1.13E-04
15GO:0010071: root meristem specification1.69E-04
16GO:0009627: systemic acquired resistance2.16E-04
17GO:0010483: pollen tube reception2.30E-04
18GO:0046283: anthocyanin-containing compound metabolic process2.95E-04
19GO:0000304: response to singlet oxygen2.95E-04
20GO:0006468: protein phosphorylation3.45E-04
21GO:0010310: regulation of hydrogen peroxide metabolic process4.36E-04
22GO:0000911: cytokinesis by cell plate formation4.36E-04
23GO:0009094: L-phenylalanine biosynthetic process4.36E-04
24GO:0009612: response to mechanical stimulus4.36E-04
25GO:0010078: maintenance of root meristem identity5.89E-04
26GO:0010492: maintenance of shoot apical meristem identity5.89E-04
27GO:0030162: regulation of proteolysis5.89E-04
28GO:0010204: defense response signaling pathway, resistance gene-independent6.69E-04
29GO:0043562: cellular response to nitrogen levels6.69E-04
30GO:0009626: plant-type hypersensitive response6.92E-04
31GO:0018105: peptidyl-serine phosphorylation8.00E-04
32GO:0009738: abscisic acid-activated signaling pathway8.08E-04
33GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.38E-04
34GO:0006952: defense response8.74E-04
35GO:0035556: intracellular signal transduction8.99E-04
36GO:0043069: negative regulation of programmed cell death9.24E-04
37GO:0030148: sphingolipid biosynthetic process1.01E-03
38GO:0012501: programmed cell death1.11E-03
39GO:0015706: nitrate transport1.11E-03
40GO:0006807: nitrogen compound metabolic process1.20E-03
41GO:0010053: root epidermal cell differentiation1.40E-03
42GO:0042343: indole glucosinolate metabolic process1.40E-03
43GO:0006874: cellular calcium ion homeostasis1.72E-03
44GO:0098542: defense response to other organism1.83E-03
45GO:2000022: regulation of jasmonic acid mediated signaling pathway1.95E-03
46GO:0042742: defense response to bacterium2.02E-03
47GO:0080022: primary root development2.42E-03
48GO:0046323: glucose import2.55E-03
49GO:0046777: protein autophosphorylation2.63E-03
50GO:0044550: secondary metabolite biosynthetic process2.67E-03
51GO:0061025: membrane fusion2.68E-03
52GO:0008654: phospholipid biosynthetic process2.80E-03
53GO:0006623: protein targeting to vacuole2.80E-03
54GO:0010183: pollen tube guidance2.80E-03
55GO:0006904: vesicle docking involved in exocytosis3.48E-03
56GO:0001666: response to hypoxia3.77E-03
57GO:0009816: defense response to bacterium, incompatible interaction3.91E-03
58GO:0042128: nitrate assimilation4.06E-03
59GO:0009817: defense response to fungus, incompatible interaction4.52E-03
60GO:0010311: lateral root formation4.67E-03
61GO:0006499: N-terminal protein myristoylation4.83E-03
62GO:0006887: exocytosis5.98E-03
63GO:0051707: response to other organism6.32E-03
64GO:0031347: regulation of defense response7.22E-03
65GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process7.22E-03
66GO:0006486: protein glycosylation7.78E-03
67GO:0040008: regulation of growth1.42E-02
68GO:0007623: circadian rhythm1.46E-02
69GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.58E-02
70GO:0015031: protein transport1.65E-02
71GO:0010468: regulation of gene expression1.66E-02
72GO:0080167: response to karrikin2.32E-02
73GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.38E-02
74GO:0016192: vesicle-mediated transport2.41E-02
75GO:0009751: response to salicylic acid3.04E-02
76GO:0006629: lipid metabolic process3.07E-02
77GO:0009416: response to light stimulus4.62E-02
78GO:0009611: response to wounding4.69E-02
RankGO TermAdjusted P value
1GO:0015591: D-ribose transmembrane transporter activity0.00E+00
2GO:0015148: D-xylose transmembrane transporter activity0.00E+00
3GO:0005365: myo-inositol transmembrane transporter activity0.00E+00
4GO:0004168: dolichol kinase activity0.00E+00
5GO:0015576: sorbitol transmembrane transporter activity0.00E+00
6GO:0003837: beta-ureidopropionase activity0.00E+00
7GO:0015575: mannitol transmembrane transporter activity0.00E+00
8GO:0005516: calmodulin binding1.44E-05
9GO:0004713: protein tyrosine kinase activity1.61E-05
10GO:0015168: glycerol transmembrane transporter activity2.53E-05
11GO:1901149: salicylic acid binding2.53E-05
12GO:0005388: calcium-transporting ATPase activity2.69E-05
13GO:0045140: inositol phosphoceramide synthase activity6.44E-05
14GO:0005354: galactose transmembrane transporter activity1.69E-04
15GO:0009931: calcium-dependent protein serine/threonine kinase activity2.16E-04
16GO:0004683: calmodulin-dependent protein kinase activity2.28E-04
17GO:0047769: arogenate dehydratase activity2.30E-04
18GO:0004664: prephenate dehydratase activity2.30E-04
19GO:0005509: calcium ion binding2.61E-04
20GO:0015145: monosaccharide transmembrane transporter activity2.95E-04
21GO:0004605: phosphatidate cytidylyltransferase activity3.65E-04
22GO:0004714: transmembrane receptor protein tyrosine kinase activity5.89E-04
23GO:0004674: protein serine/threonine kinase activity7.11E-04
24GO:0071949: FAD binding7.52E-04
25GO:0015112: nitrate transmembrane transporter activity8.38E-04
26GO:0005262: calcium channel activity1.20E-03
27GO:0004970: ionotropic glutamate receptor activity1.40E-03
28GO:0005217: intracellular ligand-gated ion channel activity1.40E-03
29GO:0005524: ATP binding1.65E-03
30GO:0005355: glucose transmembrane transporter activity2.68E-03
31GO:0042803: protein homodimerization activity3.07E-03
32GO:0004871: signal transducer activity3.07E-03
33GO:0016597: amino acid binding3.63E-03
34GO:0004806: triglyceride lipase activity4.21E-03
35GO:0004712: protein serine/threonine/tyrosine kinase activity5.64E-03
36GO:0016301: kinase activity6.05E-03
37GO:0005484: SNAP receptor activity6.32E-03
38GO:0016298: lipase activity7.97E-03
39GO:0031625: ubiquitin protein ligase binding8.35E-03
40GO:0051082: unfolded protein binding9.95E-03
41GO:0015144: carbohydrate transmembrane transporter activity1.32E-02
42GO:0005351: sugar:proton symporter activity1.44E-02
43GO:0004672: protein kinase activity1.90E-02
44GO:0046982: protein heterodimerization activity1.97E-02
45GO:0004497: monooxygenase activity2.32E-02
46GO:0005515: protein binding2.51E-02
47GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.79E-02
48GO:0016887: ATPase activity4.19E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.05E-04
2GO:0070062: extracellular exosome1.69E-04
3GO:0005783: endoplasmic reticulum2.77E-04
4GO:0031902: late endosome membrane3.84E-04
5GO:0005887: integral component of plasma membrane6.04E-04
6GO:0030665: clathrin-coated vesicle membrane8.38E-04
7GO:0017119: Golgi transport complex9.24E-04
8GO:0030176: integral component of endoplasmic reticulum membrane1.40E-03
9GO:0009504: cell plate2.80E-03
10GO:0000145: exocyst3.07E-03
11GO:0005788: endoplasmic reticulum lumen3.91E-03
12GO:0019005: SCF ubiquitin ligase complex4.52E-03
13GO:0016021: integral component of membrane5.87E-03
14GO:0090406: pollen tube6.32E-03
15GO:0005794: Golgi apparatus6.77E-03
16GO:0009706: chloroplast inner membrane9.95E-03
17GO:0009705: plant-type vacuole membrane1.46E-02
18GO:0005773: vacuole1.67E-02
19GO:0000139: Golgi membrane1.75E-02
20GO:0005789: endoplasmic reticulum membrane1.98E-02
21GO:0009507: chloroplast2.53E-02
22GO:0016020: membrane4.33E-02
23GO:0005774: vacuolar membrane4.47E-02
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Gene type



Gene DE type