co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G10520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
2	GO:0015979: photosynthesis	4.01E-10
3	GO:0010196: nonphotochemical quenching	1.70E-07
4	GO:0071277: cellular response to calcium ion	3.22E-06
5	GO:0010027: thylakoid membrane organization	1.06E-05
6	GO:0015995: chlorophyll biosynthetic process	1.30E-05
7	GO:0090391: granum assembly	1.68E-05
8	GO:0031365: N-terminal protein amino acid modification	4.99E-05
9	GO:0009772: photosynthetic electron transport in photosystem II	9.36E-05
10	GO:0009704: de-etiolation	1.10E-04
11	GO:0090333: regulation of stomatal closure	1.45E-04
12	GO:0009658: chloroplast organization	1.73E-04
13	GO:0018119: peptidyl-cysteine S-nitrosylation	2.02E-04
14	GO:0009773: photosynthetic electron transport in photosystem I	2.02E-04
15	GO:0080167: response to karrikin	2.17E-04
16	GO:0006006: glucose metabolic process	2.43E-04
17	GO:0019253: reductive pentose-phosphate cycle	2.64E-04
18	GO:0015986: ATP synthesis coupled proton transport	5.42E-04
19	GO:0006096: glycolytic process	1.65E-03
20	GO:0045490: pectin catabolic process	2.70E-03
21	GO:0008152: metabolic process	5.86E-03
22	GO:0055114: oxidation-reduction process	6.01E-03
23	GO:0009735: response to cytokinin	7.67E-03
24	GO:0045893: positive regulation of transcription, DNA-templated	8.99E-03
25	GO:0055085: transmembrane transport	9.65E-03
26	GO:0042742: defense response to bacterium	1.34E-02
27	GO:0009409: response to cold	1.66E-02
28	GO:0009737: response to abscisic acid	2.30E-02
29	GO:0016310: phosphorylation	2.54E-02
30	GO:0006508: proteolysis	2.99E-02

Rank	GO Term	Adjusted P value
1	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
2	GO:0051738: xanthophyll binding	0.00E+00
3	GO:0090711: FMN hydrolase activity	0.00E+00
4	GO:0016630: protochlorophyllide reductase activity	8.96E-06
5	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	8.96E-06
6	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.68E-05
7	GO:0003959: NADPH dehydrogenase activity	4.99E-05
8	GO:0008235: metalloexopeptidase activity	9.36E-05
9	GO:0004177: aminopeptidase activity	2.02E-04
10	GO:0043424: protein histidine kinase binding	3.51E-04
11	GO:0030570: pectate lyase activity	4.21E-04
12	GO:0022891: substrate-specific transmembrane transporter activity	4.21E-04
13	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	5.18E-04
14	GO:0016168: chlorophyll binding	7.80E-04
15	GO:0050661: NADP binding	1.13E-03
16	GO:0043621: protein self-association	1.28E-03
17	GO:0051287: NAD binding	1.38E-03
18	GO:0016829: lyase activity	2.29E-03
19	GO:0046872: metal ion binding	7.53E-03
20	GO:0005509: calcium ion binding	1.27E-02
21	GO:0016491: oxidoreductase activity	1.63E-02
22	GO:0016787: hydrolase activity	2.31E-02

Rank	GO Term	Adjusted P value
1	GO:0009534: chloroplast thylakoid	3.11E-13
2	GO:0009535: chloroplast thylakoid membrane	4.00E-11
3	GO:0009579: thylakoid	6.41E-09
4	GO:0009507: chloroplast	4.15E-07
5	GO:0009515: granal stacked thylakoid	3.22E-06
6	GO:0009517: PSII associated light-harvesting complex II	3.75E-05
7	GO:0009941: chloroplast envelope	4.44E-05
8	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	6.35E-05
9	GO:0030095: chloroplast photosystem II	2.64E-04
10	GO:0009654: photosystem II oxygen evolving complex	3.51E-04
11	GO:0009523: photosystem II	5.68E-04
12	GO:0019898: extrinsic component of membrane	5.68E-04
13	GO:0010319: stromule	6.98E-04
14	GO:0031977: thylakoid lumen	1.16E-03
15	GO:0009706: chloroplast inner membrane	1.87E-03
16	GO:0010287: plastoglobule	2.10E-03
17	GO:0009543: chloroplast thylakoid lumen	2.18E-03
18	GO:0031969: chloroplast membrane	4.20E-03
19	GO:0009570: chloroplast stroma	6.97E-03
20	GO:0016020: membrane	1.22E-02
21	GO:0048046: apoplast	3.37E-02