co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G09020

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway	0.00E+00
2	GO:0042891: antibiotic transport	0.00E+00
3	GO:0010398: xylogalacturonan metabolic process	0.00E+00
4	GO:0010200: response to chitin	6.81E-15
5	GO:0042742: defense response to bacterium	3.65E-08
6	GO:0009617: response to bacterium	2.23E-07
7	GO:0010120: camalexin biosynthetic process	2.29E-06
8	GO:0043069: negative regulation of programmed cell death	5.88E-06
9	GO:0052544: defense response by callose deposition in cell wall	7.66E-06
10	GO:0048194: Golgi vesicle budding	1.03E-05
11	GO:0060548: negative regulation of cell death	1.93E-05
12	GO:0080142: regulation of salicylic acid biosynthetic process	1.93E-05
13	GO:0046777: protein autophosphorylation	1.96E-05
14	GO:0009759: indole glucosinolate biosynthetic process	4.69E-05
15	GO:0010044: response to aluminum ion	8.77E-05
16	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	8.77E-05
17	GO:0070370: cellular heat acclimation	8.77E-05
18	GO:0009626: plant-type hypersensitive response	1.13E-04
19	GO:0043562: cellular response to nitrogen levels	1.42E-04
20	GO:0051245: negative regulation of cellular defense response	1.56E-04
21	GO:0010941: regulation of cell death	1.56E-04
22	GO:0009609: response to symbiotic bacterium	1.56E-04
23	GO:0071366: cellular response to indolebutyric acid stimulus	1.56E-04
24	GO:0080136: priming of cellular response to stress	1.56E-04
25	GO:0006643: membrane lipid metabolic process	1.56E-04
26	GO:0051865: protein autoubiquitination	1.73E-04
27	GO:0006979: response to oxidative stress	1.88E-04
28	GO:0009816: defense response to bacterium, incompatible interaction	1.99E-04
29	GO:0009682: induced systemic resistance	2.86E-04
30	GO:0006468: protein phosphorylation	2.95E-04
31	GO:0006212: uracil catabolic process	3.55E-04
32	GO:0019483: beta-alanine biosynthetic process	3.55E-04
33	GO:0010541: acropetal auxin transport	3.55E-04
34	GO:0051252: regulation of RNA metabolic process	3.55E-04
35	GO:0019441: tryptophan catabolic process to kynurenine	3.55E-04
36	GO:0002221: pattern recognition receptor signaling pathway	3.55E-04
37	GO:0034605: cellular response to heat	4.23E-04
38	GO:0007166: cell surface receptor signaling pathway	4.32E-04
39	GO:0070588: calcium ion transmembrane transport	4.74E-04
40	GO:0000162: tryptophan biosynthetic process	5.28E-04
41	GO:0048281: inflorescence morphogenesis	5.82E-04
42	GO:0042344: indole glucosinolate catabolic process	5.82E-04
43	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	5.82E-04
44	GO:1900140: regulation of seedling development	5.82E-04
45	GO:0010359: regulation of anion channel activity	5.82E-04
46	GO:0061158: 3'-UTR-mediated mRNA destabilization	5.82E-04
47	GO:0009636: response to toxic substance	5.85E-04
48	GO:0050832: defense response to fungus	6.71E-04
49	GO:0071456: cellular response to hypoxia	7.69E-04
50	GO:0031348: negative regulation of defense response	7.69E-04
51	GO:0007231: osmosensory signaling pathway	8.33E-04
52	GO:0070301: cellular response to hydrogen peroxide	8.33E-04
53	GO:0043207: response to external biotic stimulus	8.33E-04
54	GO:0006612: protein targeting to membrane	8.33E-04
55	GO:0009399: nitrogen fixation	8.33E-04
56	GO:0002679: respiratory burst involved in defense response	8.33E-04
57	GO:0009723: response to ethylene	8.57E-04
58	GO:0009611: response to wounding	9.50E-04
59	GO:0048830: adventitious root development	1.10E-03
60	GO:1902584: positive regulation of response to water deprivation	1.10E-03
61	GO:0010363: regulation of plant-type hypersensitive response	1.10E-03
62	GO:0033500: carbohydrate homeostasis	1.10E-03
63	GO:0010600: regulation of auxin biosynthetic process	1.10E-03
64	GO:2000038: regulation of stomatal complex development	1.10E-03
65	GO:0010508: positive regulation of autophagy	1.10E-03
66	GO:0010188: response to microbial phytotoxin	1.10E-03
67	GO:0006542: glutamine biosynthetic process	1.10E-03
68	GO:0018105: peptidyl-serine phosphorylation	1.18E-03
69	GO:0048544: recognition of pollen	1.21E-03
70	GO:0009697: salicylic acid biosynthetic process	1.40E-03
71	GO:0006090: pyruvate metabolic process	1.40E-03
72	GO:0015691: cadmium ion transport	1.72E-03
73	GO:1902456: regulation of stomatal opening	1.72E-03
74	GO:1900425: negative regulation of defense response to bacterium	1.72E-03
75	GO:0051607: defense response to virus	1.88E-03
76	GO:0046686: response to cadmium ion	1.93E-03
77	GO:2000037: regulation of stomatal complex patterning	2.06E-03
78	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.06E-03
79	GO:0010150: leaf senescence	2.26E-03
80	GO:0009610: response to symbiotic fungus	2.42E-03
81	GO:0046470: phosphatidylcholine metabolic process	2.42E-03
82	GO:0043090: amino acid import	2.42E-03
83	GO:0009873: ethylene-activated signaling pathway	2.51E-03
84	GO:0008219: cell death	2.59E-03
85	GO:0009817: defense response to fungus, incompatible interaction	2.59E-03
86	GO:0010311: lateral root formation	2.72E-03
87	GO:0009819: drought recovery	2.80E-03
88	GO:1900150: regulation of defense response to fungus	2.80E-03
89	GO:0009407: toxin catabolic process	2.85E-03
90	GO:0006952: defense response	2.97E-03
91	GO:0010119: regulation of stomatal movement	2.99E-03
92	GO:0009808: lignin metabolic process	3.21E-03
93	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	3.21E-03
94	GO:0009737: response to abscisic acid	3.58E-03
95	GO:0009051: pentose-phosphate shunt, oxidative branch	3.63E-03
96	GO:0010112: regulation of systemic acquired resistance	3.63E-03
97	GO:0006887: exocytosis	3.88E-03
98	GO:0009738: abscisic acid-activated signaling pathway	3.88E-03
99	GO:2000280: regulation of root development	4.06E-03
100	GO:0051707: response to other organism	4.21E-03
101	GO:0006970: response to osmotic stress	4.31E-03
102	GO:0009641: shade avoidance	4.52E-03
103	GO:0055062: phosphate ion homeostasis	4.52E-03
104	GO:0006995: cellular response to nitrogen starvation	4.52E-03
105	GO:0009684: indoleacetic acid biosynthetic process	4.99E-03
106	GO:0009698: phenylpropanoid metabolic process	4.99E-03
107	GO:0072593: reactive oxygen species metabolic process	4.99E-03
108	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	5.48E-03
109	GO:0000266: mitochondrial fission	5.48E-03
110	GO:0010105: negative regulation of ethylene-activated signaling pathway	5.48E-03
111	GO:0044550: secondary metabolite biosynthetic process	5.73E-03
112	GO:0006807: nitrogen compound metabolic process	5.98E-03
113	GO:0006108: malate metabolic process	5.98E-03
114	GO:0010229: inflorescence development	5.98E-03
115	GO:0002237: response to molecule of bacterial origin	6.50E-03
116	GO:0007034: vacuolar transport	6.50E-03
117	GO:0006886: intracellular protein transport	6.74E-03
118	GO:0009620: response to fungus	7.36E-03
119	GO:0009833: plant-type primary cell wall biogenesis	7.59E-03
120	GO:0009863: salicylic acid mediated signaling pathway	8.16E-03
121	GO:0009742: brassinosteroid mediated signaling pathway	8.55E-03
122	GO:0009651: response to salt stress	8.69E-03
123	GO:0009695: jasmonic acid biosynthetic process	8.74E-03
124	GO:0051260: protein homooligomerization	9.34E-03
125	GO:0031408: oxylipin biosynthetic process	9.34E-03
126	GO:0048278: vesicle docking	9.34E-03
127	GO:0009814: defense response, incompatible interaction	9.96E-03
128	GO:0009625: response to insect	1.06E-02
129	GO:0006012: galactose metabolic process	1.06E-02
130	GO:0009693: ethylene biosynthetic process	1.06E-02
131	GO:0071215: cellular response to abscisic acid stimulus	1.06E-02
132	GO:0001944: vasculature development	1.06E-02
133	GO:0009845: seed germination	1.09E-02
134	GO:0010091: trichome branching	1.12E-02
135	GO:0042147: retrograde transport, endosome to Golgi	1.19E-02
136	GO:0042391: regulation of membrane potential	1.25E-02
137	GO:0000271: polysaccharide biosynthetic process	1.25E-02
138	GO:0000413: protein peptidyl-prolyl isomerization	1.25E-02
139	GO:0046323: glucose import	1.32E-02
140	GO:0008360: regulation of cell shape	1.32E-02
141	GO:0006885: regulation of pH	1.32E-02
142	GO:0045489: pectin biosynthetic process	1.32E-02
143	GO:0006662: glycerol ether metabolic process	1.32E-02
144	GO:0010197: polar nucleus fusion	1.32E-02
145	GO:0040008: regulation of growth	1.33E-02
146	GO:0061025: membrane fusion	1.39E-02
147	GO:0009851: auxin biosynthetic process	1.46E-02
148	GO:0006623: protein targeting to vacuole	1.46E-02
149	GO:0010183: pollen tube guidance	1.46E-02
150	GO:0000302: response to reactive oxygen species	1.54E-02
151	GO:0006891: intra-Golgi vesicle-mediated transport	1.54E-02
152	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.56E-02
153	GO:0016032: viral process	1.61E-02
154	GO:0006904: vesicle docking involved in exocytosis	1.84E-02
155	GO:0009409: response to cold	1.87E-02
156	GO:0035556: intracellular signal transduction	1.88E-02
157	GO:0045893: positive regulation of transcription, DNA-templated	2.09E-02
158	GO:0009627: systemic acquired resistance	2.16E-02
159	GO:0042128: nitrate assimilation	2.16E-02
160	GO:0006906: vesicle fusion	2.16E-02
161	GO:0048481: plant ovule development	2.41E-02
162	GO:0030244: cellulose biosynthetic process	2.41E-02
163	GO:0009832: plant-type cell wall biogenesis	2.50E-02
164	GO:0048527: lateral root development	2.67E-02
165	GO:0080167: response to karrikin	2.69E-02
166	GO:0006865: amino acid transport	2.76E-02
167	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.78E-02
168	GO:0016192: vesicle-mediated transport	2.83E-02
169	GO:0009867: jasmonic acid mediated signaling pathway	2.85E-02
170	GO:0034599: cellular response to oxidative stress	2.94E-02
171	GO:0055114: oxidation-reduction process	3.40E-02
172	GO:0009926: auxin polar transport	3.42E-02
173	GO:0010114: response to red light	3.42E-02
174	GO:0000209: protein polyubiquitination	3.51E-02
175	GO:0008643: carbohydrate transport	3.61E-02
176	GO:0006855: drug transmembrane transport	3.81E-02
177	GO:0016042: lipid catabolic process	3.85E-02
178	GO:0009751: response to salicylic acid	3.90E-02
179	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.91E-02
180	GO:0006629: lipid metabolic process	3.96E-02
181	GO:0009408: response to heat	3.96E-02
182	GO:0006812: cation transport	4.01E-02
183	GO:0009414: response to water deprivation	4.10E-02
184	GO:0071555: cell wall organization	4.22E-02
185	GO:0006813: potassium ion transport	4.22E-02
186	GO:0009753: response to jasmonic acid	4.24E-02
187	GO:0010224: response to UV-B	4.33E-02
188	GO:0048367: shoot system development	4.86E-02
189	GO:0009733: response to auxin	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
2	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
3	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
4	GO:0015370: solute:sodium symporter activity	0.00E+00
5	GO:0003837: beta-ureidopropionase activity	0.00E+00
6	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
7	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
8	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
9	GO:0004012: phospholipid-translocating ATPase activity	2.76E-09
10	GO:0005524: ATP binding	9.58E-08
11	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.71E-07
12	GO:0005516: calmodulin binding	1.22E-06
13	GO:0008948: oxaloacetate decarboxylase activity	3.14E-05
14	GO:0016301: kinase activity	5.17E-05
15	GO:0005509: calcium ion binding	1.51E-04
16	GO:2001227: quercitrin binding	1.56E-04
17	GO:0030295: protein kinase activator activity	1.56E-04
18	GO:0015168: glycerol transmembrane transporter activity	1.56E-04
19	GO:2001147: camalexin binding	1.56E-04
20	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.15E-04
21	GO:0004683: calmodulin-dependent protein kinase activity	2.31E-04
22	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.13E-04
23	GO:0008428: ribonuclease inhibitor activity	3.55E-04
24	GO:0004061: arylformamidase activity	3.55E-04
25	GO:0047209: coniferyl-alcohol glucosyltransferase activity	3.55E-04
26	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	3.55E-04
27	GO:0001047: core promoter binding	3.55E-04
28	GO:0005388: calcium-transporting ATPase activity	3.74E-04
29	GO:0019825: oxygen binding	3.96E-04
30	GO:0004672: protein kinase activity	4.63E-04
31	GO:0016595: glutamate binding	5.82E-04
32	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	5.82E-04
33	GO:0004049: anthranilate synthase activity	5.82E-04
34	GO:0016174: NAD(P)H oxidase activity	5.82E-04
35	GO:0000287: magnesium ion binding	6.68E-04
36	GO:0033612: receptor serine/threonine kinase binding	7.05E-04
37	GO:0005506: iron ion binding	7.81E-04
38	GO:0005354: galactose transmembrane transporter activity	8.33E-04
39	GO:0015086: cadmium ion transmembrane transporter activity	8.33E-04
40	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	1.10E-03
41	GO:0004470: malic enzyme activity	1.10E-03
42	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	1.10E-03
43	GO:0015204: urea transmembrane transporter activity	1.10E-03
44	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.39E-03
45	GO:0004356: glutamate-ammonia ligase activity	1.40E-03
46	GO:0015145: monosaccharide transmembrane transporter activity	1.40E-03
47	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.40E-03
48	GO:0035252: UDP-xylosyltransferase activity	1.72E-03
49	GO:0020037: heme binding	1.98E-03
50	GO:0008320: protein transmembrane transporter activity	2.42E-03
51	GO:0043295: glutathione binding	2.42E-03
52	GO:0004620: phospholipase activity	2.42E-03
53	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.80E-03
54	GO:0004034: aldose 1-epimerase activity	2.80E-03
55	GO:0004708: MAP kinase kinase activity	2.80E-03
56	GO:0003843: 1,3-beta-D-glucan synthase activity	3.21E-03
57	GO:0004630: phospholipase D activity	3.21E-03
58	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.21E-03
59	GO:0016207: 4-coumarate-CoA ligase activity	3.63E-03
60	GO:0004364: glutathione transferase activity	4.04E-03
61	GO:0009672: auxin:proton symporter activity	4.06E-03
62	GO:0015293: symporter activity	4.73E-03
63	GO:0047372: acylglycerol lipase activity	4.99E-03
64	GO:0061630: ubiquitin protein ligase activity	5.50E-03
65	GO:0005262: calcium channel activity	5.98E-03
66	GO:0000175: 3'-5'-exoribonuclease activity	5.98E-03
67	GO:0030246: carbohydrate binding	6.40E-03
68	GO:0004535: poly(A)-specific ribonuclease activity	6.50E-03
69	GO:0004190: aspartic-type endopeptidase activity	7.04E-03
70	GO:0030552: cAMP binding	7.04E-03
71	GO:0030553: cGMP binding	7.04E-03
72	GO:0003954: NADH dehydrogenase activity	8.16E-03
73	GO:0005216: ion channel activity	8.74E-03
74	GO:0005515: protein binding	8.84E-03
75	GO:0008408: 3'-5' exonuclease activity	9.34E-03
76	GO:0004540: ribonuclease activity	9.34E-03
77	GO:0004707: MAP kinase activity	9.34E-03
78	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.04E-02
79	GO:0016760: cellulose synthase (UDP-forming) activity	1.06E-02
80	GO:0022891: substrate-specific transmembrane transporter activity	1.06E-02
81	GO:0003727: single-stranded RNA binding	1.12E-02
82	GO:0047134: protein-disulfide reductase activity	1.19E-02
83	GO:0015144: carbohydrate transmembrane transporter activity	1.21E-02
84	GO:0005249: voltage-gated potassium channel activity	1.25E-02
85	GO:0030551: cyclic nucleotide binding	1.25E-02
86	GO:0005451: monovalent cation:proton antiporter activity	1.25E-02
87	GO:0001085: RNA polymerase II transcription factor binding	1.32E-02
88	GO:0005351: sugar:proton symporter activity	1.37E-02
89	GO:0004791: thioredoxin-disulfide reductase activity	1.39E-02
90	GO:0016853: isomerase activity	1.39E-02
91	GO:0005355: glucose transmembrane transporter activity	1.39E-02
92	GO:0015299: solute:proton antiporter activity	1.39E-02
93	GO:0015385: sodium:proton antiporter activity	1.68E-02
94	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.68E-02
95	GO:0016759: cellulose synthase activity	1.76E-02
96	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.78E-02
97	GO:0004674: protein serine/threonine kinase activity	1.82E-02
98	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.84E-02
99	GO:0043565: sequence-specific DNA binding	1.95E-02
100	GO:0004806: triglyceride lipase activity	2.24E-02
101	GO:0004222: metalloendopeptidase activity	2.58E-02
102	GO:0046872: metal ion binding	2.64E-02
103	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.67E-02
104	GO:0050897: cobalt ion binding	2.67E-02
105	GO:0004497: monooxygenase activity	2.69E-02
106	GO:0000149: SNARE binding	3.04E-02
107	GO:0005525: GTP binding	3.27E-02
108	GO:0005484: SNAP receptor activity	3.42E-02
109	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.81E-02
110	GO:0051287: NAD binding	3.91E-02
111	GO:0003924: GTPase activity	3.96E-02
112	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.97E-02
113	GO:0044212: transcription regulatory region DNA binding	4.22E-02
114	GO:0016298: lipase activity	4.33E-02
115	GO:0015171: amino acid transmembrane transporter activity	4.54E-02
116	GO:0031625: ubiquitin protein ligase binding	4.54E-02
117	GO:0045735: nutrient reservoir activity	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.27E-14
2	GO:0016021: integral component of membrane	3.11E-08
3	GO:0030014: CCR4-NOT complex	1.56E-04
4	GO:0009506: plasmodesma	2.02E-04
5	GO:0005950: anthranilate synthase complex	3.55E-04
6	GO:0031304: intrinsic component of mitochondrial inner membrane	3.55E-04
7	GO:0005901: caveola	3.55E-04
8	GO:0005789: endoplasmic reticulum membrane	5.06E-04
9	GO:0005887: integral component of plasma membrane	5.72E-04
10	GO:0070062: extracellular exosome	8.33E-04
11	GO:0005775: vacuolar lumen	8.33E-04
12	GO:0016020: membrane	1.03E-03
13	GO:0000164: protein phosphatase type 1 complex	1.40E-03
14	GO:0005802: trans-Golgi network	2.08E-03
15	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	2.42E-03
16	GO:0000148: 1,3-beta-D-glucan synthase complex	3.21E-03
17	GO:0031902: late endosome membrane	3.88E-03
18	GO:0016604: nuclear body	4.06E-03
19	GO:0017119: Golgi transport complex	4.52E-03
20	GO:0000139: Golgi membrane	5.34E-03
21	GO:0031012: extracellular matrix	5.98E-03
22	GO:0005794: Golgi apparatus	8.57E-03
23	GO:0005783: endoplasmic reticulum	1.37E-02
24	GO:0009504: cell plate	1.46E-02
25	GO:0000145: exocyst	1.61E-02
26	GO:0032580: Golgi cisterna membrane	1.76E-02
27	GO:0005667: transcription factor complex	2.16E-02
28	GO:0005774: vacuolar membrane	2.68E-02
29	GO:0031201: SNARE complex	3.22E-02
30	GO:0005618: cell wall	3.36E-02
31	GO:0005768: endosome	3.71E-02
32	GO:0043231: intracellular membrane-bounded organelle	4.36E-02
33	GO:0005829: cytosol	4.85E-02