GO Enrichment Analysis of Co-expressed Genes with
AT3G08940
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015979: photosynthesis | 2.34E-09 |
| 2 | GO:0010196: nonphotochemical quenching | 9.64E-06 |
| 3 | GO:0000481: maturation of 5S rRNA | 3.90E-05 |
| 4 | GO:0034337: RNA folding | 3.90E-05 |
| 5 | GO:0006013: mannose metabolic process | 1.68E-04 |
| 6 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.48E-04 |
| 7 | GO:0051513: regulation of monopolar cell growth | 2.48E-04 |
| 8 | GO:2000122: negative regulation of stomatal complex development | 3.33E-04 |
| 9 | GO:0010037: response to carbon dioxide | 3.33E-04 |
| 10 | GO:0015976: carbon utilization | 3.33E-04 |
| 11 | GO:0045727: positive regulation of translation | 3.33E-04 |
| 12 | GO:0015994: chlorophyll metabolic process | 3.33E-04 |
| 13 | GO:0006461: protein complex assembly | 4.25E-04 |
| 14 | GO:1902456: regulation of stomatal opening | 5.22E-04 |
| 15 | GO:0009772: photosynthetic electron transport in photosystem II | 7.28E-04 |
| 16 | GO:0032508: DNA duplex unwinding | 8.37E-04 |
| 17 | GO:0032544: plastid translation | 9.50E-04 |
| 18 | GO:0009657: plastid organization | 9.50E-04 |
| 19 | GO:0010206: photosystem II repair | 1.07E-03 |
| 20 | GO:0010205: photoinhibition | 1.19E-03 |
| 21 | GO:0006810: transport | 1.26E-03 |
| 22 | GO:0006949: syncytium formation | 1.31E-03 |
| 23 | GO:0009698: phenylpropanoid metabolic process | 1.44E-03 |
| 24 | GO:0009773: photosynthetic electron transport in photosystem I | 1.44E-03 |
| 25 | GO:0009735: response to cytokinin | 1.49E-03 |
| 26 | GO:0006094: gluconeogenesis | 1.72E-03 |
| 27 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.48E-03 |
| 28 | GO:0061077: chaperone-mediated protein folding | 2.64E-03 |
| 29 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.97E-03 |
| 30 | GO:0015986: ATP synthesis coupled proton transport | 3.87E-03 |
| 31 | GO:0042742: defense response to bacterium | 4.07E-03 |
| 32 | GO:0010193: response to ozone | 4.26E-03 |
| 33 | GO:0009828: plant-type cell wall loosening | 4.85E-03 |
| 34 | GO:0045454: cell redox homeostasis | 5.05E-03 |
| 35 | GO:0015995: chlorophyll biosynthetic process | 6.13E-03 |
| 36 | GO:0018298: protein-chromophore linkage | 6.58E-03 |
| 37 | GO:0009817: defense response to fungus, incompatible interaction | 6.58E-03 |
| 38 | GO:0010119: regulation of stomatal movement | 7.27E-03 |
| 39 | GO:0009664: plant-type cell wall organization | 1.09E-02 |
| 40 | GO:0006364: rRNA processing | 1.14E-02 |
| 41 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.17E-02 |
| 42 | GO:0010224: response to UV-B | 1.17E-02 |
| 43 | GO:0006096: glycolytic process | 1.28E-02 |
| 44 | GO:0006508: proteolysis | 1.69E-02 |
| 45 | GO:0007623: circadian rhythm | 2.16E-02 |
| 46 | GO:0006979: response to oxidative stress | 2.26E-02 |
| 47 | GO:0010468: regulation of gene expression | 2.45E-02 |
| 48 | GO:0009826: unidimensional cell growth | 2.86E-02 |
| 49 | GO:0009658: chloroplast organization | 2.94E-02 |
| 50 | GO:0009409: response to cold | 3.04E-02 |
| 51 | GO:0032259: methylation | 4.39E-02 |
| 52 | GO:0007165: signal transduction | 4.66E-02 |
| 53 | GO:0008152: metabolic process | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 2 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 3 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 3.90E-05 |
| 4 | GO:0005528: FK506 binding | 8.70E-05 |
| 5 | GO:0047746: chlorophyllase activity | 9.72E-05 |
| 6 | GO:0016868: intramolecular transferase activity, phosphotransferases | 9.72E-05 |
| 7 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 9.72E-05 |
| 8 | GO:0008967: phosphoglycolate phosphatase activity | 9.72E-05 |
| 9 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.33E-04 |
| 10 | GO:0004332: fructose-bisphosphate aldolase activity | 5.22E-04 |
| 11 | GO:0004602: glutathione peroxidase activity | 6.22E-04 |
| 12 | GO:0004559: alpha-mannosidase activity | 6.22E-04 |
| 13 | GO:0004185: serine-type carboxypeptidase activity | 7.05E-04 |
| 14 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.17E-04 |
| 15 | GO:0015078: hydrogen ion transmembrane transporter activity | 9.50E-04 |
| 16 | GO:0004089: carbonate dehydratase activity | 1.72E-03 |
| 17 | GO:0031072: heat shock protein binding | 1.72E-03 |
| 18 | GO:0008266: poly(U) RNA binding | 1.86E-03 |
| 19 | GO:0031409: pigment binding | 2.16E-03 |
| 20 | GO:0004176: ATP-dependent peptidase activity | 2.64E-03 |
| 21 | GO:0004707: MAP kinase activity | 2.64E-03 |
| 22 | GO:0003756: protein disulfide isomerase activity | 3.15E-03 |
| 23 | GO:0050662: coenzyme binding | 3.87E-03 |
| 24 | GO:0048038: quinone binding | 4.26E-03 |
| 25 | GO:0016168: chlorophyll binding | 5.69E-03 |
| 26 | GO:0030145: manganese ion binding | 7.27E-03 |
| 27 | GO:0016787: hydrolase activity | 1.07E-02 |
| 28 | GO:0051082: unfolded protein binding | 1.46E-02 |
| 29 | GO:0019843: rRNA binding | 1.72E-02 |
| 30 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.05E-02 |
| 31 | GO:0003729: mRNA binding | 3.34E-02 |
| 32 | GO:0008233: peptidase activity | 3.39E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 5.95E-23 |
| 4 | GO:0009534: chloroplast thylakoid | 9.47E-21 |
| 5 | GO:0009507: chloroplast | 4.23E-19 |
| 6 | GO:0030095: chloroplast photosystem II | 1.33E-11 |
| 7 | GO:0009941: chloroplast envelope | 1.51E-11 |
| 8 | GO:0009579: thylakoid | 1.03E-10 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 2.61E-09 |
| 10 | GO:0009570: chloroplast stroma | 2.55E-08 |
| 11 | GO:0009523: photosystem II | 5.03E-06 |
| 12 | GO:0009533: chloroplast stromal thylakoid | 9.64E-06 |
| 13 | GO:0009783: photosystem II antenna complex | 3.90E-05 |
| 14 | GO:0042651: thylakoid membrane | 9.72E-05 |
| 15 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 5.22E-04 |
| 16 | GO:0009538: photosystem I reaction center | 8.37E-04 |
| 17 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.07E-03 |
| 18 | GO:0042644: chloroplast nucleoid | 1.07E-03 |
| 19 | GO:0010287: plastoglobule | 1.54E-03 |
| 20 | GO:0032040: small-subunit processome | 1.58E-03 |
| 21 | GO:0009508: plastid chromosome | 1.72E-03 |
| 22 | GO:0009654: photosystem II oxygen evolving complex | 2.48E-03 |
| 23 | GO:0009522: photosystem I | 3.87E-03 |
| 24 | GO:0019898: extrinsic component of membrane | 4.06E-03 |
| 25 | GO:0031969: chloroplast membrane | 4.23E-03 |
| 26 | GO:0010319: stromule | 5.05E-03 |
| 27 | GO:0009295: nucleoid | 5.05E-03 |
| 28 | GO:0031977: thylakoid lumen | 8.74E-03 |
| 29 | GO:0009706: chloroplast inner membrane | 1.46E-02 |
| 30 | GO:0016020: membrane | 1.80E-02 |
| 31 | GO:0048046: apoplast | 2.09E-02 |
| 32 | GO:0005618: cell wall | 2.33E-02 |
| 33 | GO:0009505: plant-type cell wall | 2.82E-02 |
| 34 | GO:0005773: vacuole | 3.35E-02 |
| 35 | GO:0016021: integral component of membrane | 3.96E-02 |