Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G08850

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035278: miRNA mediated inhibition of translation0.00E+00
2GO:0034728: nucleosome organization4.31E-05
3GO:0080136: priming of cellular response to stress4.31E-05
4GO:0007093: mitotic cell cycle checkpoint4.31E-05
5GO:1900036: positive regulation of cellular response to heat4.31E-05
6GO:0090213: regulation of radial pattern formation4.31E-05
7GO:0090421: embryonic meristem initiation4.31E-05
8GO:1903648: positive regulation of chlorophyll catabolic process4.31E-05
9GO:0051315: attachment of mitotic spindle microtubules to kinetochore4.31E-05
10GO:0009660: amyloplast organization1.07E-04
11GO:0040034: regulation of development, heterochronic1.07E-04
12GO:0016584: nucleosome positioning1.07E-04
13GO:0071217: cellular response to external biotic stimulus1.07E-04
14GO:1902000: homogentisate catabolic process1.07E-04
15GO:0035335: peptidyl-tyrosine dephosphorylation1.07E-04
16GO:0046898: response to cycloheximide1.07E-04
17GO:0043631: RNA polyadenylation1.07E-04
18GO:0007032: endosome organization1.84E-04
19GO:0043044: ATP-dependent chromatin remodeling1.84E-04
20GO:0045836: positive regulation of meiotic nuclear division1.84E-04
21GO:0010272: response to silver ion1.84E-04
22GO:0006572: tyrosine catabolic process2.70E-04
23GO:0006914: autophagy3.21E-04
24GO:0045723: positive regulation of fatty acid biosynthetic process3.64E-04
25GO:2000038: regulation of stomatal complex development3.64E-04
26GO:0042594: response to starvation3.64E-04
27GO:0044804: nucleophagy3.64E-04
28GO:0045927: positive regulation of growth4.63E-04
29GO:0000422: mitophagy4.63E-04
30GO:0016558: protein import into peroxisome matrix4.63E-04
31GO:0007094: mitotic spindle assembly checkpoint4.63E-04
32GO:0048481: plant ovule development4.98E-04
33GO:0006559: L-phenylalanine catabolic process5.67E-04
34GO:0000045: autophagosome assembly5.67E-04
35GO:0009959: negative gravitropism5.67E-04
36GO:2000037: regulation of stomatal complex patterning6.76E-04
37GO:1900057: positive regulation of leaf senescence7.90E-04
38GO:0006333: chromatin assembly or disassembly7.90E-04
39GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway7.90E-04
40GO:0006368: transcription elongation from RNA polymerase II promoter7.90E-04
41GO:0009880: embryonic pattern specification1.03E-03
42GO:0010120: camalexin biosynthetic process1.03E-03
43GO:0010204: defense response signaling pathway, resistance gene-independent1.03E-03
44GO:0006972: hyperosmotic response1.03E-03
45GO:0010206: photosystem II repair1.16E-03
46GO:0001708: cell fate specification1.16E-03
47GO:0009620: response to fungus1.36E-03
48GO:0009870: defense response signaling pathway, resistance gene-dependent1.43E-03
49GO:0006378: mRNA polyadenylation1.57E-03
50GO:0046856: phosphatidylinositol dephosphorylation1.57E-03
51GO:0010229: inflorescence development1.87E-03
52GO:0048467: gynoecium development2.03E-03
53GO:0010223: secondary shoot formation2.03E-03
54GO:0051301: cell division2.19E-03
55GO:0007033: vacuole organization2.19E-03
56GO:0042023: DNA endoreduplication2.36E-03
57GO:0010150: leaf senescence2.52E-03
58GO:0006334: nucleosome assembly2.88E-03
59GO:0051321: meiotic cell cycle2.88E-03
60GO:0009561: megagametogenesis3.43E-03
61GO:0010091: trichome branching3.43E-03
62GO:0006970: response to osmotic stress4.18E-03
63GO:0006623: protein targeting to vacuole4.43E-03
64GO:0010183: pollen tube guidance4.43E-03
65GO:0048510: regulation of timing of transition from vegetative to reproductive phase4.64E-03
66GO:0000302: response to reactive oxygen species4.64E-03
67GO:0006891: intra-Golgi vesicle-mediated transport4.64E-03
68GO:0006635: fatty acid beta-oxidation4.64E-03
69GO:0030163: protein catabolic process5.07E-03
70GO:0019760: glucosinolate metabolic process5.30E-03
71GO:0009651: response to salt stress5.36E-03
72GO:0001666: response to hypoxia5.98E-03
73GO:0006974: cellular response to DNA damage stimulus6.45E-03
74GO:0048573: photoperiodism, flowering6.69E-03
75GO:0016049: cell growth6.94E-03
76GO:0006397: mRNA processing7.39E-03
77GO:0006499: N-terminal protein myristoylation7.69E-03
78GO:0045087: innate immune response8.47E-03
79GO:0006897: endocytosis9.56E-03
80GO:0042542: response to hydrogen peroxide9.83E-03
81GO:0031347: regulation of defense response1.16E-02
82GO:0051603: proteolysis involved in cellular protein catabolic process1.28E-02
83GO:0010224: response to UV-B1.28E-02
84GO:0009909: regulation of flower development1.34E-02
85GO:0009626: plant-type hypersensitive response1.47E-02
86GO:0016569: covalent chromatin modification1.54E-02
87GO:0009553: embryo sac development1.57E-02
88GO:0009624: response to nematode1.60E-02
89GO:0016567: protein ubiquitination1.97E-02
90GO:0006508: proteolysis1.99E-02
91GO:0009790: embryo development2.10E-02
92GO:0010228: vegetative to reproductive phase transition of meristem2.44E-02
93GO:0009414: response to water deprivation2.50E-02
94GO:0042742: defense response to bacterium2.56E-02
95GO:0006979: response to oxidative stress2.58E-02
96GO:0006470: protein dephosphorylation2.60E-02
97GO:0010468: regulation of gene expression2.68E-02
98GO:0008380: RNA splicing2.68E-02
99GO:0009617: response to bacterium2.68E-02
100GO:0030154: cell differentiation2.78E-02
101GO:0015031: protein transport3.25E-02
102GO:0007049: cell cycle3.49E-02
103GO:0009723: response to ethylene3.58E-02
104GO:0006886: intracellular protein transport4.37E-02
105GO:0009751: response to salicylic acid4.90E-02
106GO:0006281: DNA repair4.95E-02
RankGO TermAdjusted P value
1GO:0004411: homogentisate 1,2-dioxygenase activity0.00E+00
2GO:0060090: binding, bridging0.00E+00
3GO:0008138: protein tyrosine/serine/threonine phosphatase activity2.46E-05
4GO:0004725: protein tyrosine phosphatase activity8.92E-05
5GO:0016314: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity1.07E-04
6GO:0052866: phosphatidylinositol phosphate phosphatase activity2.70E-04
7GO:0004652: polynucleotide adenylyltransferase activity2.70E-04
8GO:0019776: Atg8 ligase activity3.64E-04
9GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides6.76E-04
10GO:0070300: phosphatidic acid binding6.76E-04
11GO:0031491: nucleosome binding6.76E-04
12GO:0031490: chromatin DNA binding1.29E-03
13GO:0004386: helicase activity1.61E-03
14GO:0000976: transcription regulatory region sequence-specific DNA binding1.72E-03
15GO:0004252: serine-type endopeptidase activity2.04E-03
16GO:0003712: transcription cofactor activity2.19E-03
17GO:0004707: MAP kinase activity2.88E-03
18GO:0008094: DNA-dependent ATPase activity2.88E-03
19GO:0016779: nucleotidyltransferase activity3.06E-03
20GO:0005515: protein binding3.77E-03
21GO:0003713: transcription coactivator activity4.02E-03
22GO:0003682: chromatin binding4.10E-03
23GO:0004197: cysteine-type endopeptidase activity4.86E-03
24GO:0003677: DNA binding5.41E-03
25GO:0008236: serine-type peptidase activity6.94E-03
26GO:0004842: ubiquitin-protein transferase activity7.23E-03
27GO:0004672: protein kinase activity7.80E-03
28GO:0004712: protein serine/threonine/tyrosine kinase activity9.01E-03
29GO:0000166: nucleotide binding1.26E-02
30GO:0008234: cysteine-type peptidase activity1.34E-02
31GO:0016874: ligase activity1.54E-02
32GO:0008565: protein transporter activity2.13E-02
33GO:0044212: transcription regulatory region DNA binding2.56E-02
34GO:0046982: protein heterodimerization activity3.18E-02
35GO:0008233: peptidase activity3.71E-02
36GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting4.27E-02
37GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding4.61E-02
RankGO TermAdjusted P value
1GO:0000153: cytoplasmic ubiquitin ligase complex0.00E+00
2GO:0070449: elongin complex0.00E+00
3GO:0005634: nucleus1.34E-04
4GO:0000932: P-body3.84E-04
5GO:0072686: mitotic spindle4.63E-04
6GO:0000776: kinetochore4.63E-04
7GO:0034045: pre-autophagosomal structure membrane1.03E-03
8GO:0010494: cytoplasmic stress granule1.16E-03
9GO:0009574: preprophase band1.87E-03
10GO:0005764: lysosome2.03E-03
11GO:0005795: Golgi stack2.19E-03
12GO:0005770: late endosome4.02E-03
13GO:0005778: peroxisomal membrane5.52E-03
14GO:0005774: vacuolar membrane5.62E-03
15GO:0000151: ubiquitin ligase complex7.19E-03
16GO:0000786: nucleosome8.21E-03
17GO:0031977: thylakoid lumen9.56E-03
18GO:0005635: nuclear envelope1.31E-02
19GO:0005681: spliceosomal complex1.40E-02
20GO:0005654: nucleoplasm1.84E-02
21GO:0009543: chloroplast thylakoid lumen1.88E-02
22GO:0005623: cell1.91E-02
23GO:0009524: phragmoplast1.95E-02
24GO:0005802: trans-Golgi network2.02E-02
25GO:0005615: extracellular space2.56E-02
26GO:0080008: Cul4-RING E3 ubiquitin ligase complex3.44E-02
27GO:0005773: vacuole3.93E-02
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Gene type



Gene DE type