co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G08720

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048227: plasma membrane to endosome transport	0.00E+00
2	GO:0042430: indole-containing compound metabolic process	0.00E+00
3	GO:0030149: sphingolipid catabolic process	0.00E+00
4	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
5	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
6	GO:0001676: long-chain fatty acid metabolic process	4.33E-06
7	GO:0060548: negative regulation of cell death	8.22E-06
8	GO:0010942: positive regulation of cell death	2.08E-05
9	GO:0043562: cellular response to nitrogen levels	6.66E-05
10	GO:0006805: xenobiotic metabolic process	9.50E-05
11	GO:0010726: positive regulation of hydrogen peroxide metabolic process	9.50E-05
12	GO:0009270: response to humidity	9.50E-05
13	GO:0060862: negative regulation of floral organ abscission	9.50E-05
14	GO:0046104: thymidine metabolic process	9.50E-05
15	GO:0006212: uracil catabolic process	2.24E-04
16	GO:0031349: positive regulation of defense response	2.24E-04
17	GO:0006101: citrate metabolic process	2.24E-04
18	GO:0019483: beta-alanine biosynthetic process	2.24E-04
19	GO:0019752: carboxylic acid metabolic process	2.24E-04
20	GO:1902000: homogentisate catabolic process	2.24E-04
21	GO:0019725: cellular homeostasis	2.24E-04
22	GO:0009072: aromatic amino acid family metabolic process	3.73E-04
23	GO:1900140: regulation of seedling development	3.73E-04
24	GO:0051176: positive regulation of sulfur metabolic process	3.73E-04
25	GO:0045793: positive regulation of cell size	3.73E-04
26	GO:0010186: positive regulation of cellular defense response	3.73E-04
27	GO:0070301: cellular response to hydrogen peroxide	5.37E-04
28	GO:0009399: nitrogen fixation	5.37E-04
29	GO:0046345: abscisic acid catabolic process	7.14E-04
30	GO:0071897: DNA biosynthetic process	7.14E-04
31	GO:0010363: regulation of plant-type hypersensitive response	7.14E-04
32	GO:0010188: response to microbial phytotoxin	7.14E-04
33	GO:0080142: regulation of salicylic acid biosynthetic process	7.14E-04
34	GO:0006542: glutamine biosynthetic process	7.14E-04
35	GO:0080037: negative regulation of cytokinin-activated signaling pathway	7.14E-04
36	GO:0010193: response to ozone	7.29E-04
37	GO:0010225: response to UV-C	9.02E-04
38	GO:0030308: negative regulation of cell growth	9.02E-04
39	GO:0009697: salicylic acid biosynthetic process	9.02E-04
40	GO:2000762: regulation of phenylpropanoid metabolic process	9.02E-04
41	GO:0006097: glyoxylate cycle	9.02E-04
42	GO:0010150: leaf senescence	9.65E-04
43	GO:0009816: defense response to bacterium, incompatible interaction	1.09E-03
44	GO:0002238: response to molecule of fungal origin	1.10E-03
45	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.10E-03
46	GO:0006751: glutathione catabolic process	1.10E-03
47	GO:0043090: amino acid import	1.54E-03
48	GO:0050790: regulation of catalytic activity	1.54E-03
49	GO:0009819: drought recovery	1.78E-03
50	GO:0030162: regulation of proteolysis	1.78E-03
51	GO:0006102: isocitrate metabolic process	1.78E-03
52	GO:0016559: peroxisome fission	1.78E-03
53	GO:0006952: defense response	1.87E-03
54	GO:0006631: fatty acid metabolic process	1.99E-03
55	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	2.03E-03
56	GO:0010200: response to chitin	2.27E-03
57	GO:0010112: regulation of systemic acquired resistance	2.29E-03
58	GO:0009809: lignin biosynthetic process	2.89E-03
59	GO:0051603: proteolysis involved in cellular protein catabolic process	2.99E-03
60	GO:0007275: multicellular organism development	3.08E-03
61	GO:0000266: mitochondrial fission	3.44E-03
62	GO:0006807: nitrogen compound metabolic process	3.76E-03
63	GO:0006468: protein phosphorylation	3.85E-03
64	GO:0006302: double-strand break repair	4.08E-03
65	GO:0002237: response to molecule of bacterial origin	4.08E-03
66	GO:0009266: response to temperature stimulus	4.08E-03
67	GO:0042343: indole glucosinolate metabolic process	4.41E-03
68	GO:0090351: seedling development	4.41E-03
69	GO:0010053: root epidermal cell differentiation	4.41E-03
70	GO:2000377: regulation of reactive oxygen species metabolic process	5.10E-03
71	GO:0098542: defense response to other organism	5.83E-03
72	GO:0009814: defense response, incompatible interaction	6.20E-03
73	GO:0016226: iron-sulfur cluster assembly	6.20E-03
74	GO:0030433: ubiquitin-dependent ERAD pathway	6.20E-03
75	GO:0007005: mitochondrion organization	6.20E-03
76	GO:0071456: cellular response to hypoxia	6.20E-03
77	GO:0042391: regulation of membrane potential	7.79E-03
78	GO:0010118: stomatal movement	7.79E-03
79	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	7.90E-03
80	GO:0007166: cell surface receptor signaling pathway	8.07E-03
81	GO:0008360: regulation of cell shape	8.21E-03
82	GO:0006520: cellular amino acid metabolic process	8.21E-03
83	GO:0006662: glycerol ether metabolic process	8.21E-03
84	GO:0006623: protein targeting to vacuole	9.06E-03
85	GO:0002229: defense response to oomycetes	9.51E-03
86	GO:0006891: intra-Golgi vesicle-mediated transport	9.51E-03
87	GO:0007264: small GTPase mediated signal transduction	9.96E-03
88	GO:0042128: nitrate assimilation	1.33E-02
89	GO:0006950: response to stress	1.38E-02
90	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.40E-02
91	GO:0046777: protein autophosphorylation	1.45E-02
92	GO:0044550: secondary metabolite biosynthetic process	1.48E-02
93	GO:0008219: cell death	1.49E-02
94	GO:0009407: toxin catabolic process	1.59E-02
95	GO:0010043: response to zinc ion	1.65E-02
96	GO:0006886: intracellular protein transport	1.68E-02
97	GO:0006865: amino acid transport	1.70E-02
98	GO:0006099: tricarboxylic acid cycle	1.81E-02
99	GO:0034599: cellular response to oxidative stress	1.81E-02
100	GO:0006979: response to oxidative stress	1.82E-02
101	GO:0008152: metabolic process	2.22E-02
102	GO:0009636: response to toxic substance	2.29E-02
103	GO:0006855: drug transmembrane transport	2.35E-02
104	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.41E-02
105	GO:0015031: protein transport	2.44E-02
106	GO:0009651: response to salt stress	2.60E-02
107	GO:0009909: regulation of flower development	2.80E-02
108	GO:0055114: oxidation-reduction process	3.04E-02
109	GO:0009626: plant-type hypersensitive response	3.07E-02
110	GO:0042545: cell wall modification	3.27E-02
111	GO:0009624: response to nematode	3.34E-02
112	GO:0018105: peptidyl-serine phosphorylation	3.42E-02
113	GO:0009742: brassinosteroid mediated signaling pathway	3.49E-02
114	GO:0035556: intracellular signal transduction	3.76E-02
115	GO:0009845: seed germination	4.15E-02
116	GO:0009737: response to abscisic acid	4.62E-02
117	GO:0040008: regulation of growth	4.77E-02
118	GO:0006511: ubiquitin-dependent protein catabolic process	4.82E-02
119	GO:0045490: pectin catabolic process	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
2	GO:0003837: beta-ureidopropionase activity	0.00E+00
3	GO:0051670: inulinase activity	0.00E+00
4	GO:0070577: lysine-acetylated histone binding	0.00E+00
5	GO:0016504: peptidase activator activity	0.00E+00
6	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
7	GO:0005524: ATP binding	3.02E-06
8	GO:0102391: decanoate--CoA ligase activity	2.96E-05
9	GO:0004467: long-chain fatty acid-CoA ligase activity	4.01E-05
10	GO:0052747: sinapyl alcohol dehydrogenase activity	5.25E-05
11	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.25E-05
12	GO:0051669: fructan beta-fructosidase activity	9.50E-05
13	GO:0004797: thymidine kinase activity	9.50E-05
14	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	9.50E-05
15	GO:0031219: levanase activity	9.50E-05
16	GO:0004713: protein tyrosine kinase activity	1.20E-04
17	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.63E-04
18	GO:0003994: aconitate hydratase activity	2.24E-04
19	GO:0008517: folic acid transporter activity	2.24E-04
20	GO:0004566: beta-glucuronidase activity	2.24E-04
21	GO:0003840: gamma-glutamyltransferase activity	3.73E-04
22	GO:0036374: glutathione hydrolase activity	3.73E-04
23	GO:0005093: Rab GDP-dissociation inhibitor activity	3.73E-04
24	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	5.37E-04
25	GO:0070628: proteasome binding	7.14E-04
26	GO:0010294: abscisic acid glucosyltransferase activity	9.02E-04
27	GO:0005496: steroid binding	9.02E-04
28	GO:0004356: glutamate-ammonia ligase activity	9.02E-04
29	GO:0036402: proteasome-activating ATPase activity	1.10E-03
30	GO:0016831: carboxy-lyase activity	1.54E-03
31	GO:0008320: protein transmembrane transporter activity	1.54E-03
32	GO:0005544: calcium-dependent phospholipid binding	1.78E-03
33	GO:0003843: 1,3-beta-D-glucan synthase activity	2.03E-03
34	GO:0004364: glutathione transferase activity	2.07E-03
35	GO:0071949: FAD binding	2.29E-03
36	GO:0005516: calmodulin binding	2.68E-03
37	GO:0008047: enzyme activator activity	2.85E-03
38	GO:0008559: xenobiotic-transporting ATPase activity	3.14E-03
39	GO:0008234: cysteine-type peptidase activity	3.20E-03
40	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.74E-03
41	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.74E-03
42	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.76E-03
43	GO:0030553: cGMP binding	4.41E-03
44	GO:0017025: TBP-class protein binding	4.41E-03
45	GO:0030552: cAMP binding	4.41E-03
46	GO:0003954: NADH dehydrogenase activity	5.10E-03
47	GO:0005216: ion channel activity	5.46E-03
48	GO:0004298: threonine-type endopeptidase activity	5.83E-03
49	GO:0033612: receptor serine/threonine kinase binding	5.83E-03
50	GO:0016887: ATPase activity	6.20E-03
51	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.58E-03
52	GO:0047134: protein-disulfide reductase activity	7.38E-03
53	GO:0030551: cyclic nucleotide binding	7.79E-03
54	GO:0005249: voltage-gated potassium channel activity	7.79E-03
55	GO:0008194: UDP-glycosyltransferase activity	7.90E-03
56	GO:0001085: RNA polymerase II transcription factor binding	8.21E-03
57	GO:0004791: thioredoxin-disulfide reductase activity	8.63E-03
58	GO:0004197: cysteine-type endopeptidase activity	9.96E-03
59	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.04E-02
60	GO:0008483: transaminase activity	1.14E-02
61	GO:0016597: amino acid binding	1.18E-02
62	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.33E-02
63	GO:0004497: monooxygenase activity	1.36E-02
64	GO:0004683: calmodulin-dependent protein kinase activity	1.38E-02
65	GO:0004674: protein serine/threonine kinase activity	1.52E-02
66	GO:0005096: GTPase activator activity	1.54E-02
67	GO:0005509: calcium ion binding	1.63E-02
68	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.65E-02
69	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.76E-02
70	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.87E-02
71	GO:0051539: 4 iron, 4 sulfur cluster binding	1.93E-02
72	GO:0016301: kinase activity	2.01E-02
73	GO:0015293: symporter activity	2.29E-02
74	GO:0016491: oxidoreductase activity	2.55E-02
75	GO:0016757: transferase activity, transferring glycosyl groups	2.65E-02
76	GO:0015171: amino acid transmembrane transporter activity	2.80E-02
77	GO:0031625: ubiquitin protein ligase binding	2.80E-02
78	GO:0045330: aspartyl esterase activity	2.80E-02
79	GO:0004672: protein kinase activity	2.92E-02
80	GO:0020037: heme binding	3.19E-02
81	GO:0030599: pectinesterase activity	3.20E-02
82	GO:0015035: protein disulfide oxidoreductase activity	3.42E-02
83	GO:0016758: transferase activity, transferring hexosyl groups	3.85E-02
84	GO:0030170: pyridoxal phosphate binding	4.23E-02
85	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.30E-02
86	GO:0008565: protein transporter activity	4.46E-02
87	GO:0046910: pectinesterase inhibitor activity	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.80E-05
2	GO:0005829: cytosol	1.91E-04
3	GO:0031304: intrinsic component of mitochondrial inner membrane	2.24E-04
4	GO:0030134: ER to Golgi transport vesicle	2.24E-04
5	GO:0005777: peroxisome	3.44E-04
6	GO:0005839: proteasome core complex	3.65E-04
7	GO:0046861: glyoxysomal membrane	3.73E-04
8	GO:0005789: endoplasmic reticulum membrane	4.73E-04
9	GO:0032586: protein storage vacuole membrane	7.14E-04
10	GO:0005801: cis-Golgi network	1.31E-03
11	GO:0031597: cytosolic proteasome complex	1.31E-03
12	GO:0031595: nuclear proteasome complex	1.54E-03
13	GO:0009514: glyoxysome	2.03E-03
14	GO:0000148: 1,3-beta-D-glucan synthase complex	2.03E-03
15	GO:0000326: protein storage vacuole	2.03E-03
16	GO:0008540: proteasome regulatory particle, base subcomplex	2.56E-03
17	GO:0000502: proteasome complex	2.89E-03
18	GO:0005783: endoplasmic reticulum	3.09E-03
19	GO:0005618: cell wall	3.11E-03
20	GO:0005765: lysosomal membrane	3.14E-03
21	GO:0005764: lysosome	4.08E-03
22	GO:0005795: Golgi stack	4.41E-03
23	GO:0005773: vacuole	5.53E-03
24	GO:0005741: mitochondrial outer membrane	5.83E-03
25	GO:0009504: cell plate	9.06E-03
26	GO:0071944: cell periphery	1.04E-02
27	GO:0016020: membrane	1.07E-02
28	GO:0005778: peroxisomal membrane	1.14E-02
29	GO:0005667: transcription factor complex	1.33E-02
30	GO:0019005: SCF ubiquitin ligase complex	1.49E-02
31	GO:0016021: integral component of membrane	1.55E-02
32	GO:0000325: plant-type vacuole	1.65E-02
33	GO:0031902: late endosome membrane	1.99E-02
34	GO:0005794: Golgi apparatus	2.30E-02
35	GO:0005774: vacuolar membrane	2.73E-02
36	GO:0010008: endosome membrane	3.00E-02
37	GO:0009506: plasmodesma	3.17E-02