co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G07780

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000731: DNA synthesis involved in DNA repair	0.00E+00
2	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
3	GO:0009991: response to extracellular stimulus	0.00E+00
4	GO:0051245: negative regulation of cellular defense response	0.00E+00
5	GO:0036258: multivesicular body assembly	0.00E+00
6	GO:0006612: protein targeting to membrane	9.63E-06
7	GO:0070676: intralumenal vesicle formation	9.63E-06
8	GO:0006468: protein phosphorylation	1.52E-05
9	GO:0010363: regulation of plant-type hypersensitive response	1.80E-05
10	GO:0009867: jasmonic acid mediated signaling pathway	2.28E-05
11	GO:0006887: exocytosis	3.22E-05
12	GO:0031348: negative regulation of defense response	3.83E-05
13	GO:0061025: membrane fusion	8.08E-05
14	GO:0006904: vesicle docking involved in exocytosis	1.44E-04
15	GO:0009968: negative regulation of signal transduction	1.50E-04
16	GO:0043547: positive regulation of GTPase activity	1.50E-04
17	GO:0009962: regulation of flavonoid biosynthetic process	1.50E-04
18	GO:0006886: intracellular protein transport	2.09E-04
19	GO:0043069: negative regulation of programmed cell death	2.32E-04
20	GO:0006952: defense response	2.81E-04
21	GO:0000266: mitochondrial fission	3.11E-04
22	GO:0071395: cellular response to jasmonic acid stimulus	3.42E-04
23	GO:0015914: phospholipid transport	3.42E-04
24	GO:2000072: regulation of defense response to fungus, incompatible interaction	3.42E-04
25	GO:0080185: effector dependent induction by symbiont of host immune response	3.42E-04
26	GO:0010618: aerenchyma formation	3.42E-04
27	GO:0007034: vacuolar transport	4.00E-04
28	GO:0070588: calcium ion transmembrane transport	4.48E-04
29	GO:0010167: response to nitrate	4.48E-04
30	GO:0009863: salicylic acid mediated signaling pathway	5.53E-04
31	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	5.61E-04
32	GO:0006556: S-adenosylmethionine biosynthetic process	5.61E-04
33	GO:0071492: cellular response to UV-A	5.61E-04
34	GO:0072661: protein targeting to plasma membrane	5.61E-04
35	GO:0048281: inflorescence morphogenesis	5.61E-04
36	GO:0048278: vesicle docking	6.67E-04
37	GO:0010148: transpiration	8.03E-04
38	GO:0070301: cellular response to hydrogen peroxide	8.03E-04
39	GO:0072583: clathrin-dependent endocytosis	8.03E-04
40	GO:0016192: vesicle-mediated transport	9.40E-04
41	GO:0046777: protein autophosphorylation	9.63E-04
42	GO:0042631: cellular response to water deprivation	9.99E-04
43	GO:0010508: positive regulation of autophagy	1.06E-03
44	GO:0060548: negative regulation of cell death	1.06E-03
45	GO:0071486: cellular response to high light intensity	1.06E-03
46	GO:0009765: photosynthesis, light harvesting	1.06E-03
47	GO:0015031: protein transport	1.15E-03
48	GO:0009749: response to glucose	1.23E-03
49	GO:0006891: intra-Golgi vesicle-mediated transport	1.31E-03
50	GO:0000304: response to singlet oxygen	1.35E-03
51	GO:0010942: positive regulation of cell death	1.65E-03
52	GO:0070814: hydrogen sulfide biosynthetic process	1.65E-03
53	GO:0048317: seed morphogenesis	1.65E-03
54	GO:0050832: defense response to fungus	1.91E-03
55	GO:0009094: L-phenylalanine biosynthetic process	1.98E-03
56	GO:0045926: negative regulation of growth	1.98E-03
57	GO:0009612: response to mechanical stimulus	1.98E-03
58	GO:0010555: response to mannitol	1.98E-03
59	GO:0010310: regulation of hydrogen peroxide metabolic process	1.98E-03
60	GO:2000067: regulation of root morphogenesis	1.98E-03
61	GO:0000911: cytokinesis by cell plate formation	1.98E-03
62	GO:0080060: integument development	1.98E-03
63	GO:0009816: defense response to bacterium, incompatible interaction	1.99E-03
64	GO:0006906: vesicle fusion	2.10E-03
65	GO:0009627: systemic acquired resistance	2.10E-03
66	GO:0070370: cellular heat acclimation	2.33E-03
67	GO:0015937: coenzyme A biosynthetic process	2.33E-03
68	GO:0010044: response to aluminum ion	2.33E-03
69	GO:0045995: regulation of embryonic development	2.33E-03
70	GO:0071446: cellular response to salicylic acid stimulus	2.33E-03
71	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.42E-03
72	GO:0009817: defense response to fungus, incompatible interaction	2.45E-03
73	GO:0007166: cell surface receptor signaling pathway	2.49E-03
74	GO:0030162: regulation of proteolysis	2.70E-03
75	GO:0016559: peroxisome fission	2.70E-03
76	GO:0009819: drought recovery	2.70E-03
77	GO:0042742: defense response to bacterium	2.84E-03
78	GO:0007165: signal transduction	3.05E-03
79	GO:0006261: DNA-dependent DNA replication	3.08E-03
80	GO:0010120: camalexin biosynthetic process	3.08E-03
81	GO:0030968: endoplasmic reticulum unfolded protein response	3.08E-03
82	GO:0007186: G-protein coupled receptor signaling pathway	3.08E-03
83	GO:0007338: single fertilization	3.49E-03
84	GO:2000280: regulation of root development	3.91E-03
85	GO:0008202: steroid metabolic process	3.91E-03
86	GO:0048268: clathrin coat assembly	3.91E-03
87	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.91E-03
88	GO:0000103: sulfate assimilation	4.35E-03
89	GO:0010629: negative regulation of gene expression	4.35E-03
90	GO:0006896: Golgi to vacuole transport	4.35E-03
91	GO:0072593: reactive oxygen species metabolic process	4.80E-03
92	GO:0009750: response to fructose	4.80E-03
93	GO:0030148: sphingolipid biosynthetic process	4.80E-03
94	GO:0015706: nitrate transport	5.27E-03
95	GO:0071365: cellular response to auxin stimulus	5.27E-03
96	GO:0012501: programmed cell death	5.27E-03
97	GO:0044550: secondary metabolite biosynthetic process	5.33E-03
98	GO:0006829: zinc II ion transport	5.75E-03
99	GO:0009887: animal organ morphogenesis	6.25E-03
100	GO:0034605: cellular response to heat	6.25E-03
101	GO:0010053: root epidermal cell differentiation	6.77E-03
102	GO:0010187: negative regulation of seed germination	7.84E-03
103	GO:0006874: cellular calcium ion homeostasis	8.40E-03
104	GO:0007275: multicellular organism development	9.25E-03
105	GO:0009814: defense response, incompatible interaction	9.56E-03
106	GO:0006730: one-carbon metabolic process	9.56E-03
107	GO:2000022: regulation of jasmonic acid mediated signaling pathway	9.56E-03
108	GO:0010017: red or far-red light signaling pathway	9.56E-03
109	GO:0009693: ethylene biosynthetic process	1.02E-02
110	GO:0071215: cellular response to abscisic acid stimulus	1.02E-02
111	GO:0009845: seed germination	1.03E-02
112	GO:0009737: response to abscisic acid	1.06E-02
113	GO:0042127: regulation of cell proliferation	1.08E-02
114	GO:0009306: protein secretion	1.08E-02
115	GO:0000226: microtubule cytoskeleton organization	1.20E-02
116	GO:0010182: sugar mediated signaling pathway	1.27E-02
117	GO:0071472: cellular response to salt stress	1.27E-02
118	GO:0010154: fruit development	1.27E-02
119	GO:0055072: iron ion homeostasis	1.41E-02
120	GO:0006623: protein targeting to vacuole	1.41E-02
121	GO:0009738: abscisic acid-activated signaling pathway	1.56E-02
122	GO:0009617: response to bacterium	1.58E-02
123	GO:0071281: cellular response to iron ion	1.62E-02
124	GO:0030163: protein catabolic process	1.62E-02
125	GO:0009611: response to wounding	1.68E-02
126	GO:0009567: double fertilization forming a zygote and endosperm	1.69E-02
127	GO:0035556: intracellular signal transduction	1.75E-02
128	GO:0071805: potassium ion transmembrane transport	1.76E-02
129	GO:0000910: cytokinesis	1.84E-02
130	GO:0001666: response to hypoxia	1.92E-02
131	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.99E-02
132	GO:0042128: nitrate assimilation	2.07E-02
133	GO:0048573: photoperiodism, flowering	2.15E-02
134	GO:0006970: response to osmotic stress	2.20E-02
135	GO:0006499: N-terminal protein myristoylation	2.48E-02
136	GO:0048527: lateral root development	2.56E-02
137	GO:0010119: regulation of stomatal movement	2.56E-02
138	GO:0010200: response to chitin	2.63E-02
139	GO:0045087: innate immune response	2.74E-02
140	GO:0030001: metal ion transport	3.00E-02
141	GO:0006897: endocytosis	3.09E-02
142	GO:0006631: fatty acid metabolic process	3.09E-02
143	GO:0009744: response to sucrose	3.28E-02
144	GO:0051707: response to other organism	3.28E-02
145	GO:0009644: response to high light intensity	3.47E-02
146	GO:0006629: lipid metabolic process	3.74E-02
147	GO:0009408: response to heat	3.74E-02
148	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.76E-02
149	GO:0006260: DNA replication	3.76E-02
150	GO:0006813: potassium ion transport	4.05E-02
151	GO:0016310: phosphorylation	4.11E-02
152	GO:0048367: shoot system development	4.67E-02
153	GO:0009626: plant-type hypersensitive response	4.78E-02
154	GO:0009620: response to fungus	4.88E-02
155	GO:0016569: covalent chromatin modification	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0033550: MAP kinase tyrosine phosphatase activity	0.00E+00
2	GO:0005515: protein binding	2.24E-07
3	GO:0005524: ATP binding	1.07E-05
4	GO:0016301: kinase activity	1.32E-04
5	GO:0032050: clathrin heavy chain binding	1.50E-04
6	GO:1901149: salicylic acid binding	1.50E-04
7	GO:0004871: signal transducer activity	2.16E-04
8	GO:0004713: protein tyrosine kinase activity	2.32E-04
9	GO:0001671: ATPase activator activity	3.42E-04
10	GO:0045140: inositol phosphoceramide synthase activity	3.42E-04
11	GO:0004594: pantothenate kinase activity	3.42E-04
12	GO:0032934: sterol binding	3.42E-04
13	GO:0005388: calcium-transporting ATPase activity	3.54E-04
14	GO:0005484: SNAP receptor activity	4.69E-04
15	GO:0031683: G-protein beta/gamma-subunit complex binding	5.61E-04
16	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	5.61E-04
17	GO:0004781: sulfate adenylyltransferase (ATP) activity	5.61E-04
18	GO:0004478: methionine adenosyltransferase activity	5.61E-04
19	GO:0001664: G-protein coupled receptor binding	5.61E-04
20	GO:0004674: protein serine/threonine kinase activity	6.46E-04
21	GO:0043495: protein anchor	1.06E-03
22	GO:0004930: G-protein coupled receptor activity	1.06E-03
23	GO:0047769: arogenate dehydratase activity	1.06E-03
24	GO:0004664: prephenate dehydratase activity	1.06E-03
25	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.06E-03
26	GO:0004040: amidase activity	1.35E-03
27	GO:0004672: protein kinase activity	1.53E-03
28	GO:0008565: protein transporter activity	1.75E-03
29	GO:0102391: decanoate--CoA ligase activity	1.98E-03
30	GO:0004467: long-chain fatty acid-CoA ligase activity	2.33E-03
31	GO:0035064: methylated histone binding	2.70E-03
32	GO:0008142: oxysterol binding	3.08E-03
33	GO:0000149: SNARE binding	3.37E-03
34	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.37E-03
35	GO:0071949: FAD binding	3.49E-03
36	GO:0015112: nitrate transmembrane transporter activity	3.91E-03
37	GO:0005545: 1-phosphatidylinositol binding	4.35E-03
38	GO:0047372: acylglycerol lipase activity	4.80E-03
39	GO:0005262: calcium channel activity	5.75E-03
40	GO:0005217: intracellular ligand-gated ion channel activity	6.77E-03
41	GO:0004970: ionotropic glutamate receptor activity	6.77E-03
42	GO:0005516: calmodulin binding	6.95E-03
43	GO:0003887: DNA-directed DNA polymerase activity	7.30E-03
44	GO:0004725: protein tyrosine phosphatase activity	7.30E-03
45	GO:0003954: NADH dehydrogenase activity	7.84E-03
46	GO:0043130: ubiquitin binding	7.84E-03
47	GO:0003924: GTPase activity	7.86E-03
48	GO:0015079: potassium ion transmembrane transporter activity	8.40E-03
49	GO:0051087: chaperone binding	8.40E-03
50	GO:0043424: protein histidine kinase binding	8.40E-03
51	GO:0033612: receptor serine/threonine kinase binding	8.97E-03
52	GO:0019706: protein-cysteine S-palmitoyltransferase activity	8.97E-03
53	GO:0046873: metal ion transmembrane transporter activity	1.27E-02
54	GO:0030276: clathrin binding	1.27E-02
55	GO:0008536: Ran GTPase binding	1.27E-02
56	GO:0010181: FMN binding	1.34E-02
57	GO:0016887: ATPase activity	1.37E-02
58	GO:0008017: microtubule binding	1.38E-02
59	GO:0016597: amino acid binding	1.84E-02
60	GO:0016168: chlorophyll binding	1.99E-02
61	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.07E-02
62	GO:0030247: polysaccharide binding	2.15E-02
63	GO:0004683: calmodulin-dependent protein kinase activity	2.15E-02
64	GO:0004806: triglyceride lipase activity	2.15E-02
65	GO:0005096: GTPase activator activity	2.40E-02
66	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.28E-02
67	GO:0035091: phosphatidylinositol binding	3.47E-02
68	GO:0005198: structural molecule activity	3.56E-02
69	GO:0016298: lipase activity	4.15E-02
70	GO:0031625: ubiquitin protein ligase binding	4.36E-02

Rank	GO Term	Adjusted P value
1	GO:0099738: cell cortex region	0.00E+00
2	GO:0045335: phagocytic vesicle	0.00E+00
3	GO:0005886: plasma membrane	3.43E-15
4	GO:0070062: extracellular exosome	9.63E-06
5	GO:0043625: delta DNA polymerase complex	1.50E-04
6	GO:0031304: intrinsic component of mitochondrial inner membrane	3.42E-04
7	GO:0031902: late endosome membrane	4.23E-04
8	GO:0005795: Golgi stack	4.48E-04
9	GO:0016021: integral component of membrane	5.11E-04
10	GO:0005834: heterotrimeric G-protein complex	9.11E-04
11	GO:0030136: clathrin-coated vesicle	9.27E-04
12	GO:0009504: cell plate	1.23E-03
13	GO:0000813: ESCRT I complex	1.35E-03
14	GO:0000145: exocyst	1.40E-03
15	GO:0005783: endoplasmic reticulum	1.59E-03
16	GO:0005771: multivesicular body	1.65E-03
17	GO:0000815: ESCRT III complex	1.98E-03
18	GO:0019005: SCF ubiquitin ligase complex	2.45E-03
19	GO:0005794: Golgi apparatus	3.05E-03
20	GO:0009506: plasmodesma	3.23E-03
21	GO:0031201: SNARE complex	3.67E-03
22	GO:0030125: clathrin vesicle coat	4.35E-03
23	GO:0017119: Golgi transport complex	4.35E-03
24	GO:0010008: endosome membrane	6.53E-03
25	GO:0005773: vacuole	6.75E-03
26	GO:0005741: mitochondrial outer membrane	8.97E-03
27	GO:0005905: clathrin-coated pit	8.97E-03
28	GO:0009524: phragmoplast	1.01E-02
29	GO:0005887: integral component of plasma membrane	1.16E-02
30	GO:0005770: late endosome	1.27E-02
31	GO:0009523: photosystem II	1.41E-02
32	GO:0019898: extrinsic component of membrane	1.41E-02
33	GO:0000139: Golgi membrane	1.72E-02
34	GO:0005778: peroxisomal membrane	1.76E-02
35	GO:0005802: trans-Golgi network	2.94E-02
36	GO:0005622: intracellular	3.35E-02
37	GO:0005856: cytoskeleton	3.56E-02