Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G07320

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002184: cytoplasmic translational termination0.00E+00
2GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
3GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
4GO:0046322: negative regulation of fatty acid oxidation0.00E+00
5GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
6GO:0007638: mechanosensory behavior0.00E+00
7GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
8GO:0042425: choline biosynthetic process0.00E+00
9GO:0042493: response to drug0.00E+00
10GO:1905499: trichome papilla formation0.00E+00
11GO:0006437: tyrosyl-tRNA aminoacylation0.00E+00
12GO:0006633: fatty acid biosynthetic process2.10E-06
13GO:0071555: cell wall organization1.80E-05
14GO:0007017: microtubule-based process2.15E-05
15GO:0010411: xyloglucan metabolic process2.50E-05
16GO:0009828: plant-type cell wall loosening1.49E-04
17GO:0010207: photosystem II assembly1.85E-04
18GO:0016123: xanthophyll biosynthetic process2.00E-04
19GO:0015995: chlorophyll biosynthetic process2.68E-04
20GO:0006869: lipid transport3.46E-04
21GO:0009826: unidimensional cell growth4.66E-04
22GO:0060627: regulation of vesicle-mediated transport4.81E-04
23GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process4.81E-04
24GO:0005980: glycogen catabolic process4.81E-04
25GO:0000032: cell wall mannoprotein biosynthetic process4.81E-04
26GO:0042759: long-chain fatty acid biosynthetic process4.81E-04
27GO:0032025: response to cobalt ion4.81E-04
28GO:0042371: vitamin K biosynthetic process4.81E-04
29GO:0043686: co-translational protein modification4.81E-04
30GO:0043007: maintenance of rDNA4.81E-04
31GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway4.81E-04
32GO:0009831: plant-type cell wall modification involved in multidimensional cell growth4.82E-04
33GO:0006353: DNA-templated transcription, termination6.06E-04
34GO:0042335: cuticle development6.58E-04
35GO:0000413: protein peptidyl-prolyl isomerization6.58E-04
36GO:0042546: cell wall biogenesis7.31E-04
37GO:0032544: plastid translation7.39E-04
38GO:0045490: pectin catabolic process9.65E-04
39GO:0009664: plant-type cell wall organization9.73E-04
40GO:0019388: galactose catabolic process1.04E-03
41GO:0045717: negative regulation of fatty acid biosynthetic process1.04E-03
42GO:0071258: cellular response to gravity1.04E-03
43GO:0010275: NAD(P)H dehydrogenase complex assembly1.04E-03
44GO:0043039: tRNA aminoacylation1.04E-03
45GO:0006949: syncytium formation1.21E-03
46GO:0010027: thylakoid membrane organization1.50E-03
47GO:0016042: lipid catabolic process1.59E-03
48GO:0033591: response to L-ascorbic acid1.69E-03
49GO:0090391: granum assembly1.69E-03
50GO:0046168: glycerol-3-phosphate catabolic process1.69E-03
51GO:1901562: response to paraquat1.69E-03
52GO:0045493: xylan catabolic process1.69E-03
53GO:2001295: malonyl-CoA biosynthetic process1.69E-03
54GO:0006065: UDP-glucuronate biosynthetic process1.69E-03
55GO:0090506: axillary shoot meristem initiation1.69E-03
56GO:0009658: chloroplast organization2.08E-03
57GO:0042254: ribosome biogenesis2.15E-03
58GO:0009052: pentose-phosphate shunt, non-oxidative branch2.45E-03
59GO:0009650: UV protection2.45E-03
60GO:0010306: rhamnogalacturonan II biosynthetic process2.45E-03
61GO:0006072: glycerol-3-phosphate metabolic process2.45E-03
62GO:0010731: protein glutathionylation2.45E-03
63GO:0006424: glutamyl-tRNA aminoacylation2.45E-03
64GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity2.45E-03
65GO:0046739: transport of virus in multicellular host2.45E-03
66GO:0009590: detection of gravity2.45E-03
67GO:0050482: arachidonic acid secretion2.45E-03
68GO:0009413: response to flooding2.45E-03
69GO:0009298: GDP-mannose biosynthetic process2.45E-03
70GO:0007231: osmosensory signaling pathway2.45E-03
71GO:0007568: aging2.54E-03
72GO:0010025: wax biosynthetic process2.57E-03
73GO:0005975: carbohydrate metabolic process2.69E-03
74GO:0009765: photosynthesis, light harvesting3.30E-03
75GO:0006085: acetyl-CoA biosynthetic process3.30E-03
76GO:0006183: GTP biosynthetic process3.30E-03
77GO:0033500: carbohydrate homeostasis3.30E-03
78GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway3.30E-03
79GO:0008295: spermidine biosynthetic process3.30E-03
80GO:0009956: radial pattern formation3.30E-03
81GO:0016998: cell wall macromolecule catabolic process3.46E-03
82GO:0030245: cellulose catabolic process3.79E-03
83GO:0000304: response to singlet oxygen4.23E-03
84GO:0032543: mitochondrial translation4.23E-03
85GO:0048359: mucilage metabolic process involved in seed coat development4.23E-03
86GO:0016120: carotene biosynthetic process4.23E-03
87GO:0010236: plastoquinone biosynthetic process4.23E-03
88GO:0006656: phosphatidylcholine biosynthetic process4.23E-03
89GO:0031365: N-terminal protein amino acid modification4.23E-03
90GO:0006665: sphingolipid metabolic process4.23E-03
91GO:0016117: carotenoid biosynthetic process4.88E-03
92GO:0006655: phosphatidylglycerol biosynthetic process5.24E-03
93GO:0006796: phosphate-containing compound metabolic process5.24E-03
94GO:0010190: cytochrome b6f complex assembly5.24E-03
95GO:0009117: nucleotide metabolic process5.24E-03
96GO:0018258: protein O-linked glycosylation via hydroxyproline5.24E-03
97GO:0006014: D-ribose metabolic process5.24E-03
98GO:0010405: arabinogalactan protein metabolic process5.24E-03
99GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway5.24E-03
100GO:0042372: phylloquinone biosynthetic process6.32E-03
101GO:0009612: response to mechanical stimulus6.32E-03
102GO:0010067: procambium histogenesis6.32E-03
103GO:0048280: vesicle fusion with Golgi apparatus6.32E-03
104GO:0009554: megasporogenesis6.32E-03
105GO:0010555: response to mannitol6.32E-03
106GO:0019252: starch biosynthetic process6.57E-03
107GO:0009772: photosynthetic electron transport in photosystem II7.48E-03
108GO:0010196: nonphotochemical quenching7.48E-03
109GO:0009645: response to low light intensity stimulus7.48E-03
110GO:0048528: post-embryonic root development7.48E-03
111GO:0005978: glycogen biosynthetic process8.71E-03
112GO:0009819: drought recovery8.71E-03
113GO:0009642: response to light intensity8.71E-03
114GO:0042255: ribosome assembly8.71E-03
115GO:0016559: peroxisome fission8.71E-03
116GO:0006644: phospholipid metabolic process8.71E-03
117GO:0010497: plasmodesmata-mediated intercellular transport1.00E-02
118GO:0006526: arginine biosynthetic process1.00E-02
119GO:0017004: cytochrome complex assembly1.00E-02
120GO:0006783: heme biosynthetic process1.14E-02
121GO:0006754: ATP biosynthetic process1.14E-02
122GO:0015780: nucleotide-sugar transport1.14E-02
123GO:0042128: nitrate assimilation1.14E-02
124GO:0006412: translation1.28E-02
125GO:0042761: very long-chain fatty acid biosynthetic process1.28E-02
126GO:0009817: defense response to fungus, incompatible interaction1.34E-02
127GO:0009735: response to cytokinin1.40E-02
128GO:0015979: photosynthesis1.41E-02
129GO:0006896: Golgi to vacuole transport1.43E-02
130GO:0006782: protoporphyrinogen IX biosynthetic process1.43E-02
131GO:0043069: negative regulation of programmed cell death1.43E-02
132GO:0009834: plant-type secondary cell wall biogenesis1.48E-02
133GO:0009407: toxin catabolic process1.48E-02
134GO:0006816: calcium ion transport1.58E-02
135GO:0006415: translational termination1.58E-02
136GO:0018119: peptidyl-cysteine S-nitrosylation1.58E-02
137GO:0010015: root morphogenesis1.58E-02
138GO:0016051: carbohydrate biosynthetic process1.70E-02
139GO:0016024: CDP-diacylglycerol biosynthetic process1.74E-02
140GO:0006006: glucose metabolic process1.91E-02
141GO:0006631: fatty acid metabolic process2.02E-02
142GO:0006629: lipid metabolic process2.08E-02
143GO:0010020: chloroplast fission2.08E-02
144GO:0009933: meristem structural organization2.08E-02
145GO:0010223: secondary shoot formation2.08E-02
146GO:0009266: response to temperature stimulus2.08E-02
147GO:0007166: cell surface receptor signaling pathway2.16E-02
148GO:0010167: response to nitrate2.26E-02
149GO:0070588: calcium ion transmembrane transport2.26E-02
150GO:0006833: water transport2.44E-02
151GO:0009636: response to toxic substance2.47E-02
152GO:0051017: actin filament bundle assembly2.62E-02
153GO:0019344: cysteine biosynthetic process2.62E-02
154GO:0042538: hyperosmotic salinity response2.76E-02
155GO:0019953: sexual reproduction2.82E-02
156GO:0006418: tRNA aminoacylation for protein translation2.82E-02
157GO:0006486: protein glycosylation2.96E-02
158GO:0031408: oxylipin biosynthetic process3.01E-02
159GO:0048511: rhythmic process3.01E-02
160GO:0010431: seed maturation3.01E-02
161GO:0031348: negative regulation of defense response3.21E-02
162GO:0009411: response to UV3.42E-02
163GO:0001944: vasculature development3.42E-02
164GO:0006012: galactose metabolic process3.42E-02
165GO:0009860: pollen tube growth3.47E-02
166GO:0010091: trichome branching3.63E-02
167GO:0019722: calcium-mediated signaling3.63E-02
168GO:0010089: xylem development3.63E-02
169GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.84E-02
170GO:0042147: retrograde transport, endosome to Golgi3.84E-02
171GO:0000226: microtubule cytoskeleton organization4.06E-02
172GO:0080022: primary root development4.06E-02
173GO:0008033: tRNA processing4.06E-02
174GO:0034220: ion transmembrane transport4.06E-02
175GO:0010087: phloem or xylem histogenesis4.06E-02
176GO:0042545: cell wall modification4.08E-02
177GO:0009624: response to nematode4.20E-02
178GO:0006520: cellular amino acid metabolic process4.28E-02
179GO:0010305: leaf vascular tissue pattern formation4.28E-02
180GO:0048868: pollen tube development4.28E-02
181GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.30E-02
182GO:0009742: brassinosteroid mediated signaling pathway4.45E-02
183GO:0042752: regulation of circadian rhythm4.51E-02
184GO:0006623: protein targeting to vacuole4.74E-02
185GO:0010183: pollen tube guidance4.74E-02
186GO:0000302: response to reactive oxygen species4.97E-02
187GO:0006891: intra-Golgi vesicle-mediated transport4.97E-02
RankGO TermAdjusted P value
1GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
2GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
3GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
4GO:0048307: ferredoxin-nitrite reductase activity0.00E+00
5GO:0004496: mevalonate kinase activity0.00E+00
6GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
7GO:0050421: nitrite reductase (NO-forming) activity0.00E+00
8GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
9GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
10GO:0045435: lycopene epsilon cyclase activity0.00E+00
11GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
12GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
13GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
14GO:0047889: ferredoxin-nitrate reductase activity0.00E+00
15GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity1.02E-05
16GO:0019843: rRNA binding1.05E-05
17GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.35E-05
18GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity7.46E-05
19GO:0016851: magnesium chelatase activity7.46E-05
20GO:0016762: xyloglucan:xyloglucosyl transferase activity1.05E-04
21GO:0005200: structural constituent of cytoskeleton1.66E-04
22GO:0003989: acetyl-CoA carboxylase activity2.00E-04
23GO:0052689: carboxylic ester hydrolase activity2.28E-04
24GO:0016798: hydrolase activity, acting on glycosyl bonds2.68E-04
25GO:0005528: FK506 binding2.93E-04
26GO:0051920: peroxiredoxin activity3.78E-04
27GO:0004560: alpha-L-fucosidase activity4.81E-04
28GO:0008184: glycogen phosphorylase activity4.81E-04
29GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity4.81E-04
30GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity4.81E-04
31GO:0004645: phosphorylase activity4.81E-04
32GO:0080132: fatty acid alpha-hydroxylase activity4.81E-04
33GO:0004476: mannose-6-phosphate isomerase activity4.81E-04
34GO:0009374: biotin binding4.81E-04
35GO:0004831: tyrosine-tRNA ligase activity4.81E-04
36GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity4.81E-04
37GO:0004853: uroporphyrinogen decarboxylase activity4.81E-04
38GO:0042586: peptide deformylase activity4.81E-04
39GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity4.81E-04
40GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.81E-04
41GO:0030570: pectate lyase activity4.82E-04
42GO:0016788: hydrolase activity, acting on ester bonds5.24E-04
43GO:0016209: antioxidant activity6.06E-04
44GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors8.84E-04
45GO:0008289: lipid binding9.50E-04
46GO:0004614: phosphoglucomutase activity1.04E-03
47GO:0000234: phosphoethanolamine N-methyltransferase activity1.04E-03
48GO:0003938: IMP dehydrogenase activity1.04E-03
49GO:0004766: spermidine synthase activity1.04E-03
50GO:0003924: GTPase activity1.68E-03
51GO:0005504: fatty acid binding1.69E-03
52GO:0004148: dihydrolipoyl dehydrogenase activity1.69E-03
53GO:0004075: biotin carboxylase activity1.69E-03
54GO:0004751: ribose-5-phosphate isomerase activity1.69E-03
55GO:0045174: glutathione dehydrogenase (ascorbate) activity1.69E-03
56GO:0030267: glyoxylate reductase (NADP) activity1.69E-03
57GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.69E-03
58GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.69E-03
59GO:0003979: UDP-glucose 6-dehydrogenase activity1.69E-03
60GO:0004565: beta-galactosidase activity1.82E-03
61GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity2.45E-03
62GO:0003878: ATP citrate synthase activity2.45E-03
63GO:0035529: NADH pyrophosphatase activity2.45E-03
64GO:0016149: translation release factor activity, codon specific2.45E-03
65GO:0043023: ribosomal large subunit binding2.45E-03
66GO:0008097: 5S rRNA binding2.45E-03
67GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.98E-03
68GO:0045430: chalcone isomerase activity3.30E-03
69GO:1990137: plant seed peroxidase activity3.30E-03
70GO:0009044: xylan 1,4-beta-xylosidase activity3.30E-03
71GO:0052793: pectin acetylesterase activity3.30E-03
72GO:0046556: alpha-L-arabinofuranosidase activity3.30E-03
73GO:0004659: prenyltransferase activity3.30E-03
74GO:0016836: hydro-lyase activity3.30E-03
75GO:0004364: glutathione transferase activity3.76E-03
76GO:0008810: cellulase activity4.14E-03
77GO:0009922: fatty acid elongase activity4.23E-03
78GO:0004623: phospholipase A2 activity4.23E-03
79GO:0051287: NAD binding5.05E-03
80GO:0004629: phospholipase C activity5.24E-03
81GO:0016462: pyrophosphatase activity5.24E-03
82GO:0004130: cytochrome-c peroxidase activity5.24E-03
83GO:0004366: glycerol-3-phosphate O-acyltransferase activity5.24E-03
84GO:0008200: ion channel inhibitor activity5.24E-03
85GO:0080030: methyl indole-3-acetate esterase activity5.24E-03
86GO:1990714: hydroxyproline O-galactosyltransferase activity5.24E-03
87GO:0003735: structural constituent of ribosome5.35E-03
88GO:0051753: mannan synthase activity6.32E-03
89GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity6.32E-03
90GO:0004435: phosphatidylinositol phospholipase C activity6.32E-03
91GO:0004747: ribokinase activity6.32E-03
92GO:0004427: inorganic diphosphatase activity7.48E-03
93GO:0043295: glutathione binding7.48E-03
94GO:0030599: pectinesterase activity8.42E-03
95GO:0004034: aldose 1-epimerase activity8.71E-03
96GO:0052747: sinapyl alcohol dehydrogenase activity8.71E-03
97GO:0008865: fructokinase activity8.71E-03
98GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism1.14E-02
99GO:0003747: translation release factor activity1.14E-02
100GO:0016829: lyase activity1.34E-02
101GO:0005525: GTP binding1.39E-02
102GO:0015020: glucuronosyltransferase activity1.43E-02
103GO:0047372: acylglycerol lipase activity1.58E-02
104GO:0004871: signal transducer activity1.63E-02
105GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.67E-02
106GO:0045551: cinnamyl-alcohol dehydrogenase activity1.74E-02
107GO:0008378: galactosyltransferase activity1.74E-02
108GO:0005262: calcium channel activity1.91E-02
109GO:0102336: 3-oxo-arachidoyl-CoA synthase activity2.44E-02
110GO:0102337: 3-oxo-cerotoyl-CoA synthase activity2.44E-02
111GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity2.44E-02
112GO:0004857: enzyme inhibitor activity2.62E-02
113GO:0030246: carbohydrate binding2.71E-02
114GO:0043424: protein histidine kinase binding2.82E-02
115GO:0008324: cation transmembrane transporter activity2.82E-02
116GO:0005507: copper ion binding2.98E-02
117GO:0033612: receptor serine/threonine kinase binding3.01E-02
118GO:0003690: double-stranded DNA binding3.06E-02
119GO:0004601: peroxidase activity3.16E-02
120GO:0005516: calmodulin binding3.26E-02
121GO:0045330: aspartyl esterase activity3.28E-02
122GO:0016491: oxidoreductase activity3.44E-02
123GO:0045735: nutrient reservoir activity3.50E-02
124GO:0003727: single-stranded RNA binding3.63E-02
125GO:0008514: organic anion transmembrane transporter activity3.63E-02
126GO:0005102: receptor binding3.84E-02
127GO:0004650: polygalacturonase activity3.84E-02
128GO:0004812: aminoacyl-tRNA ligase activity3.84E-02
129GO:0003713: transcription coactivator activity4.28E-02
130GO:0016853: isomerase activity4.51E-02
131GO:0019901: protein kinase binding4.74E-02
RankGO TermAdjusted P value
1GO:0005835: fatty acid synthase complex0.00E+00
2GO:0009507: chloroplast1.08E-24
3GO:0009570: chloroplast stroma1.63E-24
4GO:0005618: cell wall1.06E-14
5GO:0009941: chloroplast envelope1.16E-14
6GO:0048046: apoplast2.20E-13
7GO:0009543: chloroplast thylakoid lumen8.44E-12
8GO:0031977: thylakoid lumen2.45E-11
9GO:0009505: plant-type cell wall8.44E-10
10GO:0009535: chloroplast thylakoid membrane1.72E-09
11GO:0009534: chloroplast thylakoid2.51E-09
12GO:0009579: thylakoid2.15E-08
13GO:0005576: extracellular region5.43E-08
14GO:0046658: anchored component of plasma membrane6.64E-08
15GO:0031225: anchored component of membrane1.10E-07
16GO:0010007: magnesium chelatase complex3.47E-05
17GO:0045298: tubulin complex4.88E-05
18GO:0005886: plasma membrane1.27E-04
19GO:0016020: membrane3.41E-04
20GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex4.81E-04
21GO:0009515: granal stacked thylakoid4.81E-04
22GO:0009923: fatty acid elongase complex4.81E-04
23GO:0009533: chloroplast stromal thylakoid4.86E-04
24GO:0009317: acetyl-CoA carboxylase complex1.69E-03
25GO:0009331: glycerol-3-phosphate dehydrogenase complex2.45E-03
26GO:0009346: citrate lyase complex2.45E-03
27GO:0015630: microtubule cytoskeleton2.45E-03
28GO:0005875: microtubule associated complex2.57E-03
29GO:0031969: chloroplast membrane3.05E-03
30GO:0005840: ribosome8.35E-03
31GO:0012507: ER to Golgi transport vesicle membrane8.71E-03
32GO:0005811: lipid particle1.00E-02
33GO:0009536: plastid1.17E-02
34GO:0009707: chloroplast outer membrane1.34E-02
35GO:0000311: plastid large ribosomal subunit1.74E-02
36GO:0043234: protein complex2.44E-02
37GO:0009506: plasmodesma2.50E-02
38GO:0009654: photosystem II oxygen evolving complex2.82E-02
39GO:0042651: thylakoid membrane2.82E-02
40GO:0015935: small ribosomal subunit3.01E-02
41GO:0031410: cytoplasmic vesicle3.21E-02
42GO:0015629: actin cytoskeleton3.42E-02
43GO:0005874: microtubule3.95E-02
44GO:0009706: chloroplast inner membrane4.20E-02
45GO:0009504: cell plate4.74E-02
46GO:0019898: extrinsic component of membrane4.74E-02
47GO:0010287: plastoglobule4.97E-02
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Gene type



Gene DE type