GO Enrichment Analysis of Co-expressed Genes with
AT3G07310
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015670: carbon dioxide transport | 0.00E+00 |
| 2 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 3 | GO:0015822: ornithine transport | 0.00E+00 |
| 4 | GO:1905615: positive regulation of developmental vegetative growth | 0.00E+00 |
| 5 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 6 | GO:0007172: signal complex assembly | 0.00E+00 |
| 7 | GO:0043609: regulation of carbon utilization | 9.50E-05 |
| 8 | GO:0000066: mitochondrial ornithine transport | 9.50E-05 |
| 9 | GO:0010028: xanthophyll cycle | 9.50E-05 |
| 10 | GO:0015936: coenzyme A metabolic process | 9.50E-05 |
| 11 | GO:0015969: guanosine tetraphosphate metabolic process | 9.50E-05 |
| 12 | GO:0090342: regulation of cell aging | 2.24E-04 |
| 13 | GO:0042325: regulation of phosphorylation | 2.24E-04 |
| 14 | GO:0016122: xanthophyll metabolic process | 2.24E-04 |
| 15 | GO:0006833: water transport | 2.70E-04 |
| 16 | GO:0071230: cellular response to amino acid stimulus | 3.73E-04 |
| 17 | GO:0006000: fructose metabolic process | 3.73E-04 |
| 18 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 5.37E-04 |
| 19 | GO:0051639: actin filament network formation | 5.37E-04 |
| 20 | GO:0034220: ion transmembrane transport | 5.52E-04 |
| 21 | GO:0010305: leaf vascular tissue pattern formation | 5.95E-04 |
| 22 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 7.14E-04 |
| 23 | GO:0009902: chloroplast relocation | 7.14E-04 |
| 24 | GO:0080037: negative regulation of cytokinin-activated signaling pathway | 7.14E-04 |
| 25 | GO:0051764: actin crosslink formation | 7.14E-04 |
| 26 | GO:0015994: chlorophyll metabolic process | 7.14E-04 |
| 27 | GO:0006413: translational initiation | 8.86E-04 |
| 28 | GO:2000762: regulation of phenylpropanoid metabolic process | 9.02E-04 |
| 29 | GO:0016120: carotene biosynthetic process | 9.02E-04 |
| 30 | GO:0007623: circadian rhythm | 9.65E-04 |
| 31 | GO:0016126: sterol biosynthetic process | 1.04E-03 |
| 32 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.10E-03 |
| 33 | GO:0042549: photosystem II stabilization | 1.10E-03 |
| 34 | GO:1901371: regulation of leaf morphogenesis | 1.10E-03 |
| 35 | GO:0010310: regulation of hydrogen peroxide metabolic process | 1.31E-03 |
| 36 | GO:1901001: negative regulation of response to salt stress | 1.31E-03 |
| 37 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 1.54E-03 |
| 38 | GO:0009910: negative regulation of flower development | 1.54E-03 |
| 39 | GO:1900056: negative regulation of leaf senescence | 1.54E-03 |
| 40 | GO:0034968: histone lysine methylation | 1.78E-03 |
| 41 | GO:0048564: photosystem I assembly | 1.78E-03 |
| 42 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.78E-03 |
| 43 | GO:0009932: cell tip growth | 2.03E-03 |
| 44 | GO:0006002: fructose 6-phosphate metabolic process | 2.03E-03 |
| 45 | GO:0009821: alkaloid biosynthetic process | 2.29E-03 |
| 46 | GO:0010206: photosystem II repair | 2.29E-03 |
| 47 | GO:0000373: Group II intron splicing | 2.29E-03 |
| 48 | GO:0048507: meristem development | 2.29E-03 |
| 49 | GO:0016571: histone methylation | 2.56E-03 |
| 50 | GO:0010205: photoinhibition | 2.56E-03 |
| 51 | GO:0010380: regulation of chlorophyll biosynthetic process | 2.56E-03 |
| 52 | GO:0055062: phosphate ion homeostasis | 2.85E-03 |
| 53 | GO:0006535: cysteine biosynthetic process from serine | 2.85E-03 |
| 54 | GO:0010629: negative regulation of gene expression | 2.85E-03 |
| 55 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.14E-03 |
| 56 | GO:0046856: phosphatidylinositol dephosphorylation | 3.14E-03 |
| 57 | GO:0006816: calcium ion transport | 3.14E-03 |
| 58 | GO:0018107: peptidyl-threonine phosphorylation | 3.76E-03 |
| 59 | GO:0006094: gluconeogenesis | 3.76E-03 |
| 60 | GO:0009753: response to jasmonic acid | 3.89E-03 |
| 61 | GO:0010207: photosystem II assembly | 4.08E-03 |
| 62 | GO:0009266: response to temperature stimulus | 4.08E-03 |
| 63 | GO:0009934: regulation of meristem structural organization | 4.08E-03 |
| 64 | GO:0010053: root epidermal cell differentiation | 4.41E-03 |
| 65 | GO:0042343: indole glucosinolate metabolic process | 4.41E-03 |
| 66 | GO:0006636: unsaturated fatty acid biosynthetic process | 4.75E-03 |
| 67 | GO:0019762: glucosinolate catabolic process | 4.75E-03 |
| 68 | GO:0051017: actin filament bundle assembly | 5.10E-03 |
| 69 | GO:0006289: nucleotide-excision repair | 5.10E-03 |
| 70 | GO:2000377: regulation of reactive oxygen species metabolic process | 5.10E-03 |
| 71 | GO:0019344: cysteine biosynthetic process | 5.10E-03 |
| 72 | GO:0008299: isoprenoid biosynthetic process | 5.46E-03 |
| 73 | GO:0006874: cellular calcium ion homeostasis | 5.46E-03 |
| 74 | GO:0098542: defense response to other organism | 5.83E-03 |
| 75 | GO:0080092: regulation of pollen tube growth | 6.20E-03 |
| 76 | GO:0010017: red or far-red light signaling pathway | 6.20E-03 |
| 77 | GO:0009416: response to light stimulus | 7.37E-03 |
| 78 | GO:0016117: carotenoid biosynthetic process | 7.38E-03 |
| 79 | GO:0006810: transport | 7.53E-03 |
| 80 | GO:0009739: response to gibberellin | 7.90E-03 |
| 81 | GO:0071472: cellular response to salt stress | 8.21E-03 |
| 82 | GO:0042752: regulation of circadian rhythm | 8.63E-03 |
| 83 | GO:0016032: viral process | 9.96E-03 |
| 84 | GO:0009630: gravitropism | 9.96E-03 |
| 85 | GO:0055085: transmembrane transport | 9.98E-03 |
| 86 | GO:0030163: protein catabolic process | 1.04E-02 |
| 87 | GO:0071805: potassium ion transmembrane transport | 1.14E-02 |
| 88 | GO:0055114: oxidation-reduction process | 1.32E-02 |
| 89 | GO:0044550: secondary metabolite biosynthetic process | 1.48E-02 |
| 90 | GO:0000160: phosphorelay signal transduction system | 1.54E-02 |
| 91 | GO:0006499: N-terminal protein myristoylation | 1.59E-02 |
| 92 | GO:0006811: ion transport | 1.59E-02 |
| 93 | GO:0009631: cold acclimation | 1.65E-02 |
| 94 | GO:0009414: response to water deprivation | 1.75E-02 |
| 95 | GO:0045087: innate immune response | 1.76E-02 |
| 96 | GO:0009853: photorespiration | 1.76E-02 |
| 97 | GO:0006839: mitochondrial transport | 1.93E-02 |
| 98 | GO:0009751: response to salicylic acid | 1.98E-02 |
| 99 | GO:0006631: fatty acid metabolic process | 1.99E-02 |
| 100 | GO:0006629: lipid metabolic process | 2.01E-02 |
| 101 | GO:0009640: photomorphogenesis | 2.10E-02 |
| 102 | GO:0016567: protein ubiquitination | 2.25E-02 |
| 103 | GO:0006508: proteolysis | 2.28E-02 |
| 104 | GO:0009651: response to salt stress | 2.60E-02 |
| 105 | GO:0006813: potassium ion transport | 2.60E-02 |
| 106 | GO:0006096: glycolytic process | 2.93E-02 |
| 107 | GO:0018105: peptidyl-serine phosphorylation | 3.42E-02 |
| 108 | GO:0009742: brassinosteroid mediated signaling pathway | 3.49E-02 |
| 109 | GO:0009611: response to wounding | 3.64E-02 |
| 110 | GO:0009058: biosynthetic process | 4.07E-02 |
| 111 | GO:0045893: positive regulation of transcription, DNA-templated | 4.08E-02 |
| 112 | GO:0042744: hydrogen peroxide catabolic process | 4.30E-02 |
| 113 | GO:0009790: embryo development | 4.38E-02 |
| 114 | GO:0006633: fatty acid biosynthetic process | 4.61E-02 |
| 115 | GO:0009737: response to abscisic acid | 4.62E-02 |
| 116 | GO:0010150: leaf senescence | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 2 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 3 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 4 | GO:0045436: lycopene beta cyclase activity | 0.00E+00 |
| 5 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 6 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 7 | GO:0004420: hydroxymethylglutaryl-CoA reductase (NADPH) activity | 9.50E-05 |
| 8 | GO:0042282: hydroxymethylglutaryl-CoA reductase activity | 9.50E-05 |
| 9 | GO:0008066: glutamate receptor activity | 9.50E-05 |
| 10 | GO:0019172: glyoxalase III activity | 2.24E-04 |
| 11 | GO:0008728: GTP diphosphokinase activity | 2.24E-04 |
| 12 | GO:0050017: L-3-cyanoalanine synthase activity | 2.24E-04 |
| 13 | GO:0005094: Rho GDP-dissociation inhibitor activity | 2.24E-04 |
| 14 | GO:0004312: fatty acid synthase activity | 2.24E-04 |
| 15 | GO:0000064: L-ornithine transmembrane transporter activity | 2.24E-04 |
| 16 | GO:0016805: dipeptidase activity | 3.73E-04 |
| 17 | GO:0010429: methyl-CpNpN binding | 3.73E-04 |
| 18 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 3.73E-04 |
| 19 | GO:0004180: carboxypeptidase activity | 3.73E-04 |
| 20 | GO:0010428: methyl-CpNpG binding | 3.73E-04 |
| 21 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.73E-04 |
| 22 | GO:0019201: nucleotide kinase activity | 5.37E-04 |
| 23 | GO:0070628: proteasome binding | 7.14E-04 |
| 24 | GO:0008453: alanine-glyoxylate transaminase activity | 7.14E-04 |
| 25 | GO:0004506: squalene monooxygenase activity | 7.14E-04 |
| 26 | GO:0002020: protease binding | 9.02E-04 |
| 27 | GO:0015250: water channel activity | 1.04E-03 |
| 28 | GO:0031593: polyubiquitin binding | 1.10E-03 |
| 29 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 1.10E-03 |
| 30 | GO:0004462: lactoylglutathione lyase activity | 1.10E-03 |
| 31 | GO:2001070: starch binding | 1.10E-03 |
| 32 | GO:0004332: fructose-bisphosphate aldolase activity | 1.10E-03 |
| 33 | GO:0000293: ferric-chelate reductase activity | 1.10E-03 |
| 34 | GO:0004017: adenylate kinase activity | 1.31E-03 |
| 35 | GO:0004124: cysteine synthase activity | 1.31E-03 |
| 36 | GO:0016844: strictosidine synthase activity | 2.56E-03 |
| 37 | GO:0030234: enzyme regulator activity | 2.85E-03 |
| 38 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 3.14E-03 |
| 39 | GO:0008327: methyl-CpG binding | 3.14E-03 |
| 40 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 3.44E-03 |
| 41 | GO:0008081: phosphoric diester hydrolase activity | 3.76E-03 |
| 42 | GO:0005262: calcium channel activity | 3.76E-03 |
| 43 | GO:0019888: protein phosphatase regulator activity | 3.76E-03 |
| 44 | GO:0004970: ionotropic glutamate receptor activity | 4.41E-03 |
| 45 | GO:0004190: aspartic-type endopeptidase activity | 4.41E-03 |
| 46 | GO:0005217: intracellular ligand-gated ion channel activity | 4.41E-03 |
| 47 | GO:0043130: ubiquitin binding | 5.10E-03 |
| 48 | GO:0015079: potassium ion transmembrane transporter activity | 5.46E-03 |
| 49 | GO:0004176: ATP-dependent peptidase activity | 5.83E-03 |
| 50 | GO:0033612: receptor serine/threonine kinase binding | 5.83E-03 |
| 51 | GO:0018024: histone-lysine N-methyltransferase activity | 7.38E-03 |
| 52 | GO:0003743: translation initiation factor activity | 8.25E-03 |
| 53 | GO:0000156: phosphorelay response regulator activity | 1.04E-02 |
| 54 | GO:0051015: actin filament binding | 1.04E-02 |
| 55 | GO:0003684: damaged DNA binding | 1.09E-02 |
| 56 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.14E-02 |
| 57 | GO:0008237: metallopeptidase activity | 1.14E-02 |
| 58 | GO:0050660: flavin adenine dinucleotide binding | 1.27E-02 |
| 59 | GO:0005096: GTPase activator activity | 1.54E-02 |
| 60 | GO:0004222: metalloendopeptidase activity | 1.59E-02 |
| 61 | GO:0050897: cobalt ion binding | 1.65E-02 |
| 62 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 1.76E-02 |
| 63 | GO:0003746: translation elongation factor activity | 1.76E-02 |
| 64 | GO:0003993: acid phosphatase activity | 1.81E-02 |
| 65 | GO:0050661: NADP binding | 1.93E-02 |
| 66 | GO:0042393: histone binding | 1.93E-02 |
| 67 | GO:0016301: kinase activity | 2.01E-02 |
| 68 | GO:0005215: transporter activity | 2.05E-02 |
| 69 | GO:0043621: protein self-association | 2.23E-02 |
| 70 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.35E-02 |
| 71 | GO:0016298: lipase activity | 2.67E-02 |
| 72 | GO:0008234: cysteine-type peptidase activity | 2.80E-02 |
| 73 | GO:0008289: lipid binding | 2.80E-02 |
| 74 | GO:0003779: actin binding | 3.27E-02 |
| 75 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.00E-02 |
| 76 | GO:0005515: protein binding | 4.03E-02 |
| 77 | GO:0030170: pyridoxal phosphate binding | 4.23E-02 |
| 78 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.93E-04 |
| 2 | GO:0005773: vacuole | 5.05E-04 |
| 3 | GO:0032432: actin filament bundle | 5.37E-04 |
| 4 | GO:0030660: Golgi-associated vesicle membrane | 7.14E-04 |
| 5 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 7.14E-04 |
| 6 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.78E-03 |
| 7 | GO:0009534: chloroplast thylakoid | 1.92E-03 |
| 8 | GO:0031977: thylakoid lumen | 1.99E-03 |
| 9 | GO:0000159: protein phosphatase type 2A complex | 3.14E-03 |
| 10 | GO:0005765: lysosomal membrane | 3.14E-03 |
| 11 | GO:0005884: actin filament | 3.14E-03 |
| 12 | GO:0030095: chloroplast photosystem II | 4.08E-03 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 5.12E-03 |
| 14 | GO:0000775: chromosome, centromeric region | 6.20E-03 |
| 15 | GO:0009579: thylakoid | 9.25E-03 |
| 16 | GO:0005886: plasma membrane | 9.79E-03 |
| 17 | GO:0016020: membrane | 1.07E-02 |
| 18 | GO:0030529: intracellular ribonucleoprotein complex | 1.23E-02 |
| 19 | GO:0009941: chloroplast envelope | 1.40E-02 |
| 20 | GO:0009535: chloroplast thylakoid membrane | 1.43E-02 |
| 21 | GO:0009707: chloroplast outer membrane | 1.49E-02 |
| 22 | GO:0000325: plant-type vacuole | 1.65E-02 |
| 23 | GO:0009570: chloroplast stroma | 2.47E-02 |
| 24 | GO:0005887: integral component of plasma membrane | 2.73E-02 |
| 25 | GO:0005747: mitochondrial respiratory chain complex I | 3.00E-02 |
| 26 | GO:0010008: endosome membrane | 3.00E-02 |
| 27 | GO:0005623: cell | 4.00E-02 |
| 28 | GO:0005759: mitochondrial matrix | 4.61E-02 |