co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G07200

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015805: S-adenosyl-L-methionine transport	0.00E+00
2	GO:0016998: cell wall macromolecule catabolic process	2.17E-06
3	GO:0045717: negative regulation of fatty acid biosynthetic process	1.10E-04
4	GO:0090506: axillary shoot meristem initiation	1.89E-04
5	GO:0010371: regulation of gibberellin biosynthetic process	2.78E-04
6	GO:0010239: chloroplast mRNA processing	2.78E-04
7	GO:0015976: carbon utilization	3.73E-04
8	GO:0008295: spermidine biosynthetic process	3.73E-04
9	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	3.73E-04
10	GO:0010411: xyloglucan metabolic process	4.68E-04
11	GO:0048359: mucilage metabolic process involved in seed coat development	4.75E-04
12	GO:0045487: gibberellin catabolic process	4.75E-04
13	GO:0000304: response to singlet oxygen	4.75E-04
14	GO:0006014: D-ribose metabolic process	5.82E-04
15	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	5.82E-04
16	GO:0006655: phosphatidylglycerol biosynthetic process	5.82E-04
17	GO:0006796: phosphate-containing compound metabolic process	5.82E-04
18	GO:0010067: procambium histogenesis	6.94E-04
19	GO:1901259: chloroplast rRNA processing	6.94E-04
20	GO:0006955: immune response	8.11E-04
21	GO:0042546: cell wall biogenesis	8.60E-04
22	GO:0016559: peroxisome fission	9.32E-04
23	GO:0006353: DNA-templated transcription, termination	9.32E-04
24	GO:0009657: plastid organization	1.06E-03
25	GO:0006754: ATP biosynthetic process	1.19E-03
26	GO:0015780: nucleotide-sugar transport	1.19E-03
27	GO:0006949: syncytium formation	1.47E-03
28	GO:0018119: peptidyl-cysteine S-nitrosylation	1.61E-03
29	GO:0006415: translational termination	1.61E-03
30	GO:0016024: CDP-diacylglycerol biosynthetic process	1.77E-03
31	GO:0010223: secondary shoot formation	2.09E-03
32	GO:0010020: chloroplast fission	2.09E-03
33	GO:0071732: cellular response to nitric oxide	2.25E-03
34	GO:0006633: fatty acid biosynthetic process	2.40E-03
35	GO:0009451: RNA modification	2.69E-03
36	GO:0031408: oxylipin biosynthetic process	2.96E-03
37	GO:0071369: cellular response to ethylene stimulus	3.33E-03
38	GO:0001944: vasculature development	3.33E-03
39	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	3.33E-03
40	GO:0010089: xylem development	3.53E-03
41	GO:0016310: phosphorylation	3.55E-03
42	GO:0016117: carotenoid biosynthetic process	3.73E-03
43	GO:0010087: phloem or xylem histogenesis	3.93E-03
44	GO:0019252: starch biosynthetic process	4.56E-03
45	GO:0071554: cell wall organization or biogenesis	4.77E-03
46	GO:0071555: cell wall organization	5.05E-03
47	GO:0071281: cellular response to iron ion	5.22E-03
48	GO:0009828: plant-type cell wall loosening	5.45E-03
49	GO:0016125: sterol metabolic process	5.45E-03
50	GO:0016126: sterol biosynthetic process	6.15E-03
51	GO:0009627: systemic acquired resistance	6.64E-03
52	GO:0015995: chlorophyll biosynthetic process	6.89E-03
53	GO:0016042: lipid catabolic process	7.17E-03
54	GO:0009817: defense response to fungus, incompatible interaction	7.39E-03
55	GO:0009813: flavonoid biosynthetic process	7.65E-03
56	GO:0005975: carbohydrate metabolic process	8.58E-03
57	GO:0016051: carbohydrate biosynthetic process	8.71E-03
58	GO:0006839: mitochondrial transport	9.55E-03
59	GO:0006631: fatty acid metabolic process	9.83E-03
60	GO:0010114: response to red light	1.04E-02
61	GO:0008643: carbohydrate transport	1.10E-02
62	GO:0009664: plant-type cell wall organization	1.22E-02
63	GO:0006812: cation transport	1.22E-02
64	GO:0006813: potassium ion transport	1.28E-02
65	GO:0006096: glycolytic process	1.45E-02
66	GO:0048367: shoot system development	1.48E-02
67	GO:0042545: cell wall modification	1.61E-02
68	GO:0006396: RNA processing	1.68E-02
69	GO:0045490: pectin catabolic process	2.43E-02
70	GO:0007623: circadian rhythm	2.43E-02
71	GO:0009739: response to gibberellin	2.63E-02
72	GO:0006470: protein dephosphorylation	2.68E-02
73	GO:0009826: unidimensional cell growth	3.23E-02
74	GO:0009658: chloroplast organization	3.32E-02
75	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.96E-02
76	GO:0015979: photosynthesis	4.25E-02
77	GO:0045454: cell redox homeostasis	4.40E-02

Rank	GO Term	Adjusted P value
1	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
2	GO:0004496: mevalonate kinase activity	0.00E+00
3	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
4	GO:0005227: calcium activated cation channel activity	4.45E-05
5	GO:0042834: peptidoglycan binding	4.45E-05
6	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	4.45E-05
7	GO:0004766: spermidine synthase activity	1.10E-04
8	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	1.10E-04
9	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	1.10E-04
10	GO:0005504: fatty acid binding	1.89E-04
11	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.76E-04
12	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	2.78E-04
13	GO:0016149: translation release factor activity, codon specific	2.78E-04
14	GO:0052793: pectin acetylesterase activity	3.73E-04
15	GO:0045430: chalcone isomerase activity	3.73E-04
16	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.68E-04
17	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	5.82E-04
18	GO:0051920: peroxiredoxin activity	6.94E-04
19	GO:0004747: ribokinase activity	6.94E-04
20	GO:0052689: carboxylic ester hydrolase activity	7.11E-04
21	GO:0004427: inorganic diphosphatase activity	8.11E-04
22	GO:0016209: antioxidant activity	9.32E-04
23	GO:0008865: fructokinase activity	9.32E-04
24	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.19E-03
25	GO:0003747: translation release factor activity	1.19E-03
26	GO:0004089: carbonate dehydratase activity	1.92E-03
27	GO:0009982: pseudouridine synthase activity	1.92E-03
28	GO:0004565: beta-galactosidase activity	1.92E-03
29	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.97E-03
30	GO:0008324: cation transmembrane transporter activity	2.77E-03
31	GO:0033612: receptor serine/threonine kinase binding	2.96E-03
32	GO:0008514: organic anion transmembrane transporter activity	3.53E-03
33	GO:0005102: receptor binding	3.73E-03
34	GO:0016788: hydrolase activity, acting on ester bonds	4.12E-03
35	GO:0003713: transcription coactivator activity	4.14E-03
36	GO:0019901: protein kinase binding	4.56E-03
37	GO:0004497: monooxygenase activity	5.00E-03
38	GO:0016413: O-acetyltransferase activity	5.91E-03
39	GO:0008236: serine-type peptidase activity	7.14E-03
40	GO:0043621: protein self-association	1.10E-02
41	GO:0045330: aspartyl esterase activity	1.38E-02
42	GO:0030599: pectinesterase activity	1.58E-02
43	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.73E-02
44	GO:0019825: oxygen binding	1.87E-02
45	GO:0019843: rRNA binding	1.93E-02
46	GO:0016301: kinase activity	2.18E-02
47	GO:0008017: microtubule binding	2.51E-02
48	GO:0005506: iron ion binding	2.62E-02
49	GO:0042802: identical protein binding	2.88E-02
50	GO:0000287: magnesium ion binding	3.27E-02
51	GO:0004601: peroxidase activity	3.32E-02
52	GO:0020037: heme binding	4.19E-02
53	GO:0004722: protein serine/threonine phosphatase activity	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0009570: chloroplast stroma	5.05E-05
2	GO:0009507: chloroplast	6.18E-05
3	GO:0005618: cell wall	7.43E-05
4	GO:0009941: chloroplast envelope	1.18E-04
5	GO:0009536: plastid	2.18E-04
6	GO:0046658: anchored component of plasma membrane	3.93E-04
7	GO:0031225: anchored component of membrane	6.21E-04
8	GO:0031969: chloroplast membrane	6.28E-04
9	GO:0048046: apoplast	1.52E-03
10	GO:0043234: protein complex	2.42E-03
11	GO:0005886: plasma membrane	6.08E-03
12	GO:0009505: plant-type cell wall	6.73E-03
13	GO:0009707: chloroplast outer membrane	7.39E-03
14	GO:0005576: extracellular region	9.64E-03
15	GO:0031977: thylakoid lumen	9.83E-03
16	GO:0009579: thylakoid	1.57E-02
17	GO:0009534: chloroplast thylakoid	1.59E-02
18	GO:0009543: chloroplast thylakoid lumen	1.93E-02
19	GO:0005615: extracellular space	2.63E-02
20	GO:0005743: mitochondrial inner membrane	4.85E-02