co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G06150

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
2	GO:0017038: protein import	0.00E+00
3	GO:0000372: Group I intron splicing	0.00E+00
4	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
5	GO:0090706: specification of plant organ position	0.00E+00
6	GO:0045014: negative regulation of transcription by glucose	0.00E+00
7	GO:0034755: iron ion transmembrane transport	1.38E-06
8	GO:0006000: fructose metabolic process	5.12E-06
9	GO:0042549: photosystem II stabilization	5.33E-05
10	GO:0008610: lipid biosynthetic process	1.27E-04
11	GO:0048564: photosystem I assembly	1.27E-04
12	GO:0010090: trichome morphogenesis	1.53E-04
13	GO:0006002: fructose 6-phosphate metabolic process	1.59E-04
14	GO:0000476: maturation of 4.5S rRNA	1.69E-04
15	GO:0000967: rRNA 5'-end processing	1.69E-04
16	GO:0006824: cobalt ion transport	1.69E-04
17	GO:0010480: microsporocyte differentiation	1.69E-04
18	GO:0006723: cuticle hydrocarbon biosynthetic process	1.69E-04
19	GO:0000481: maturation of 5S rRNA	1.69E-04
20	GO:0042547: cell wall modification involved in multidimensional cell growth	1.69E-04
21	GO:0034628: 'de novo' NAD biosynthetic process from aspartate	1.69E-04
22	GO:0043609: regulation of carbon utilization	1.69E-04
23	GO:0034337: RNA folding	1.69E-04
24	GO:0010450: inflorescence meristem growth	1.69E-04
25	GO:0016119: carotene metabolic process	1.69E-04
26	GO:0048507: meristem development	1.95E-04
27	GO:0000373: Group II intron splicing	1.95E-04
28	GO:0009416: response to light stimulus	2.36E-04
29	GO:0009773: photosynthetic electron transport in photosystem I	3.19E-04
30	GO:1900871: chloroplast mRNA modification	3.83E-04
31	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.83E-04
32	GO:0030388: fructose 1,6-bisphosphate metabolic process	3.83E-04
33	GO:0034470: ncRNA processing	3.83E-04
34	GO:0006094: gluconeogenesis	4.18E-04
35	GO:0010207: photosystem II assembly	4.71E-04
36	GO:0043447: alkane biosynthetic process	6.25E-04
37	GO:0006013: mannose metabolic process	6.25E-04
38	GO:0043617: cellular response to sucrose starvation	6.25E-04
39	GO:0051176: positive regulation of sulfur metabolic process	6.25E-04
40	GO:0045165: cell fate commitment	6.25E-04
41	GO:0055114: oxidation-reduction process	9.85E-04
42	GO:0042335: cuticle development	1.17E-03
43	GO:0042631: cellular response to water deprivation	1.17E-03
44	GO:2000038: regulation of stomatal complex development	1.18E-03
45	GO:0010109: regulation of photosynthesis	1.18E-03
46	GO:0045727: positive regulation of translation	1.18E-03
47	GO:0009646: response to absence of light	1.35E-03
48	GO:0015979: photosynthesis	1.36E-03
49	GO:0030308: negative regulation of cell growth	1.50E-03
50	GO:0043097: pyrimidine nucleoside salvage	1.50E-03
51	GO:0046785: microtubule polymerization	1.50E-03
52	GO:1902183: regulation of shoot apical meristem development	1.50E-03
53	GO:0016123: xanthophyll biosynthetic process	1.50E-03
54	GO:0009435: NAD biosynthetic process	1.50E-03
55	GO:0010158: abaxial cell fate specification	1.50E-03
56	GO:0032876: negative regulation of DNA endoreduplication	1.50E-03
57	GO:0006206: pyrimidine nucleobase metabolic process	1.85E-03
58	GO:0009913: epidermal cell differentiation	1.85E-03
59	GO:0000741: karyogamy	1.85E-03
60	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.85E-03
61	GO:0006354: DNA-templated transcription, elongation	1.85E-03
62	GO:0010304: PSII associated light-harvesting complex II catabolic process	1.85E-03
63	GO:0006629: lipid metabolic process	2.02E-03
64	GO:0009854: oxidative photosynthetic carbon pathway	2.22E-03
65	GO:2000037: regulation of stomatal complex patterning	2.22E-03
66	GO:0042128: nitrate assimilation	2.48E-03
67	GO:0048437: floral organ development	2.61E-03
68	GO:1900057: positive regulation of leaf senescence	2.61E-03
69	GO:0051510: regulation of unidimensional cell growth	2.61E-03
70	GO:0009772: photosynthetic electron transport in photosystem II	2.61E-03
71	GO:1900056: negative regulation of leaf senescence	2.61E-03
72	GO:0006402: mRNA catabolic process	3.02E-03
73	GO:0009850: auxin metabolic process	3.02E-03
74	GO:0006605: protein targeting	3.02E-03
75	GO:0032508: DNA duplex unwinding	3.02E-03
76	GO:0010492: maintenance of shoot apical meristem identity	3.02E-03
77	GO:0009910: negative regulation of flower development	3.33E-03
78	GO:0032544: plastid translation	3.46E-03
79	GO:0010093: specification of floral organ identity	3.46E-03
80	GO:0009932: cell tip growth	3.46E-03
81	GO:0071482: cellular response to light stimulus	3.46E-03
82	GO:0009853: photorespiration	3.65E-03
83	GO:0006098: pentose-phosphate shunt	3.91E-03
84	GO:0010206: photosystem II repair	3.91E-03
85	GO:2000024: regulation of leaf development	3.91E-03
86	GO:0048589: developmental growth	3.91E-03
87	GO:0009060: aerobic respiration	3.91E-03
88	GO:0010380: regulation of chlorophyll biosynthetic process	4.38E-03
89	GO:0010205: photoinhibition	4.38E-03
90	GO:0006879: cellular iron ion homeostasis	5.38E-03
91	GO:0009750: response to fructose	5.38E-03
92	GO:0018119: peptidyl-cysteine S-nitrosylation	5.38E-03
93	GO:0048229: gametophyte development	5.38E-03
94	GO:0000038: very long-chain fatty acid metabolic process	5.38E-03
95	GO:0005983: starch catabolic process	5.91E-03
96	GO:0010152: pollen maturation	5.91E-03
97	GO:0008361: regulation of cell size	5.91E-03
98	GO:0006364: rRNA processing	6.32E-03
99	GO:0010102: lateral root morphogenesis	6.46E-03
100	GO:0030048: actin filament-based movement	6.46E-03
101	GO:2000028: regulation of photoperiodism, flowering	6.46E-03
102	GO:0018107: peptidyl-threonine phosphorylation	6.46E-03
103	GO:0009718: anthocyanin-containing compound biosynthetic process	6.46E-03
104	GO:0010075: regulation of meristem growth	6.46E-03
105	GO:0009767: photosynthetic electron transport chain	6.46E-03
106	GO:0005986: sucrose biosynthetic process	6.46E-03
107	GO:0009933: meristem structural organization	7.02E-03
108	GO:0019253: reductive pentose-phosphate cycle	7.02E-03
109	GO:0009934: regulation of meristem structural organization	7.02E-03
110	GO:0048768: root hair cell tip growth	7.02E-03
111	GO:0006096: glycolytic process	7.47E-03
112	GO:0010053: root epidermal cell differentiation	7.60E-03
113	GO:0010025: wax biosynthetic process	8.20E-03
114	GO:0009944: polarity specification of adaxial/abaxial axis	8.81E-03
115	GO:0006289: nucleotide-excision repair	8.81E-03
116	GO:0061077: chaperone-mediated protein folding	1.01E-02
117	GO:0009814: defense response, incompatible interaction	1.08E-02
118	GO:0016226: iron-sulfur cluster assembly	1.08E-02
119	GO:0009686: gibberellin biosynthetic process	1.14E-02
120	GO:0071369: cellular response to ethylene stimulus	1.14E-02
121	GO:0048443: stamen development	1.21E-02
122	GO:0048653: anther development	1.36E-02
123	GO:0010154: fruit development	1.43E-02
124	GO:0010305: leaf vascular tissue pattern formation	1.43E-02
125	GO:0010197: polar nucleus fusion	1.43E-02
126	GO:0009741: response to brassinosteroid	1.43E-02
127	GO:0010268: brassinosteroid homeostasis	1.43E-02
128	GO:0007623: circadian rhythm	1.56E-02
129	GO:0009791: post-embryonic development	1.58E-02
130	GO:0016132: brassinosteroid biosynthetic process	1.66E-02
131	GO:0048235: pollen sperm cell differentiation	1.74E-02
132	GO:0009735: response to cytokinin	1.80E-02
133	GO:0030163: protein catabolic process	1.82E-02
134	GO:0016125: sterol metabolic process	1.90E-02
135	GO:0071805: potassium ion transmembrane transport	1.99E-02
136	GO:0001666: response to hypoxia	2.16E-02
137	GO:0016126: sterol biosynthetic process	2.16E-02
138	GO:0009409: response to cold	2.21E-02
139	GO:0045893: positive regulation of transcription, DNA-templated	2.40E-02
140	GO:0015995: chlorophyll biosynthetic process	2.42E-02
141	GO:0009658: chloroplast organization	2.42E-02
142	GO:0016311: dephosphorylation	2.51E-02
143	GO:0018298: protein-chromophore linkage	2.61E-02
144	GO:0006499: N-terminal protein myristoylation	2.79E-02
145	GO:0006811: ion transport	2.79E-02
146	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.10E-02
147	GO:0046777: protein autophosphorylation	3.21E-02
148	GO:0009640: photomorphogenesis	3.69E-02
149	GO:0009744: response to sucrose	3.69E-02
150	GO:0009644: response to high light intensity	3.91E-02
151	GO:0006855: drug transmembrane transport	4.12E-02
152	GO:0009737: response to abscisic acid	4.28E-02
153	GO:0009585: red, far-red light phototransduction	4.57E-02
154	GO:0006813: potassium ion transport	4.57E-02
155	GO:0006397: mRNA processing	4.60E-02
156	GO:0006857: oligopeptide transport	4.79E-02
157	GO:0008152: metabolic process	4.86E-02
158	GO:0009909: regulation of flower development	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0008987: quinolinate synthetase A activity	0.00E+00
2	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
3	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
4	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
5	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
6	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
7	GO:0008974: phosphoribulokinase activity	0.00E+00
8	GO:0008465: glycerate dehydrogenase activity	0.00E+00
9	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
10	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
11	GO:0005528: FK506 binding	3.13E-05
12	GO:0051777: ent-kaurenoate oxidase activity	1.69E-04
13	GO:0052638: indole-3-butyrate beta-glucosyltransferase activity	1.69E-04
14	GO:0005381: iron ion transmembrane transporter activity	2.33E-04
15	GO:0010291: carotene beta-ring hydroxylase activity	3.83E-04
16	GO:0005094: Rho GDP-dissociation inhibitor activity	3.83E-04
17	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	3.83E-04
18	GO:0016787: hydrolase activity	3.96E-04
19	GO:0008266: poly(U) RNA binding	4.71E-04
20	GO:0004148: dihydrolipoyl dehydrogenase activity	6.25E-04
21	GO:0016805: dipeptidase activity	6.25E-04
22	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	6.25E-04
23	GO:0015462: ATPase-coupled protein transmembrane transporter activity	6.25E-04
24	GO:0004180: carboxypeptidase activity	6.25E-04
25	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	7.03E-04
26	GO:0019201: nucleotide kinase activity	8.93E-04
27	GO:0004506: squalene monooxygenase activity	1.18E-03
28	GO:0070628: proteasome binding	1.18E-03
29	GO:0010011: auxin binding	1.18E-03
30	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.18E-03
31	GO:0008453: alanine-glyoxylate transaminase activity	1.18E-03
32	GO:0016491: oxidoreductase activity	1.72E-03
33	GO:0000293: ferric-chelate reductase activity	1.85E-03
34	GO:0031593: polyubiquitin binding	1.85E-03
35	GO:0042578: phosphoric ester hydrolase activity	1.85E-03
36	GO:2001070: starch binding	1.85E-03
37	GO:0004332: fructose-bisphosphate aldolase activity	1.85E-03
38	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	2.22E-03
39	GO:0004017: adenylate kinase activity	2.22E-03
40	GO:0004849: uridine kinase activity	2.22E-03
41	GO:0004559: alpha-mannosidase activity	2.22E-03
42	GO:0008017: microtubule binding	2.75E-03
43	GO:0071949: FAD binding	3.91E-03
44	GO:0003824: catalytic activity	4.49E-03
45	GO:0008047: enzyme activator activity	4.87E-03
46	GO:0008081: phosphoric diester hydrolase activity	6.46E-03
47	GO:0004022: alcohol dehydrogenase (NAD) activity	6.46E-03
48	GO:0016298: lipase activity	6.54E-03
49	GO:0003774: motor activity	7.02E-03
50	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	8.20E-03
51	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	8.20E-03
52	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	8.20E-03
53	GO:0043130: ubiquitin binding	8.81E-03
54	GO:0015079: potassium ion transmembrane transporter activity	9.44E-03
55	GO:0004176: ATP-dependent peptidase activity	1.01E-02
56	GO:0033612: receptor serine/threonine kinase binding	1.01E-02
57	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.01E-02
58	GO:0030570: pectate lyase activity	1.14E-02
59	GO:0022891: substrate-specific transmembrane transporter activity	1.14E-02
60	GO:0016829: lyase activity	1.22E-02
61	GO:0005506: iron ion binding	1.37E-02
62	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.45E-02
63	GO:0050662: coenzyme binding	1.51E-02
64	GO:0005215: transporter activity	1.63E-02
65	GO:0005524: ATP binding	1.67E-02
66	GO:0003743: translation initiation factor activity	1.83E-02
67	GO:0003684: damaged DNA binding	1.90E-02
68	GO:0008237: metallopeptidase activity	1.99E-02
69	GO:0042802: identical protein binding	1.99E-02
70	GO:0003723: RNA binding	2.18E-02
71	GO:0016168: chlorophyll binding	2.24E-02
72	GO:0004672: protein kinase activity	2.49E-02
73	GO:0015238: drug transmembrane transporter activity	2.70E-02
74	GO:0005096: GTPase activator activity	2.70E-02
75	GO:0004222: metalloendopeptidase activity	2.79E-02
76	GO:0050660: flavin adenine dinucleotide binding	2.80E-02
77	GO:0050897: cobalt ion binding	2.89E-02
78	GO:0004497: monooxygenase activity	3.00E-02
79	GO:0003746: translation elongation factor activity	3.08E-02
80	GO:0051539: 4 iron, 4 sulfur cluster binding	3.38E-02
81	GO:0051537: 2 iron, 2 sulfur cluster binding	3.91E-02
82	GO:0015293: symporter activity	4.01E-02
83	GO:0051287: NAD binding	4.23E-02
84	GO:0005515: protein binding	4.33E-02
85	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.57E-02
86	GO:0003777: microtubule motor activity	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0009534: chloroplast thylakoid	4.53E-09
3	GO:0009507: chloroplast	4.62E-09
4	GO:0009570: chloroplast stroma	1.10E-08
5	GO:0009535: chloroplast thylakoid membrane	4.89E-08
6	GO:0009941: chloroplast envelope	2.98E-06
7	GO:0009579: thylakoid	7.74E-06
8	GO:0000428: DNA-directed RNA polymerase complex	1.69E-04
9	GO:0009344: nitrite reductase complex [NAD(P)H]	1.69E-04
10	GO:0030529: intracellular ribonucleoprotein complex	2.14E-04
11	GO:0009543: chloroplast thylakoid lumen	2.48E-04
12	GO:0055028: cortical microtubule	2.75E-04
13	GO:0009523: photosystem II	1.44E-03
14	GO:0005886: plasma membrane	3.88E-03
15	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.91E-03
16	GO:0008180: COP9 signalosome	3.91E-03
17	GO:0005763: mitochondrial small ribosomal subunit	3.91E-03
18	GO:0048046: apoplast	4.31E-03
19	GO:0016021: integral component of membrane	4.80E-03
20	GO:0016459: myosin complex	4.87E-03
21	GO:0032040: small-subunit processome	5.91E-03
22	GO:0030095: chloroplast photosystem II	7.02E-03
23	GO:0000312: plastid small ribosomal subunit	7.02E-03
24	GO:0030659: cytoplasmic vesicle membrane	7.02E-03
25	GO:0009654: photosystem II oxygen evolving complex	9.44E-03
26	GO:0009532: plastid stroma	1.01E-02
27	GO:0010287: plastoglobule	1.07E-02
28	GO:0005759: mitochondrial matrix	1.42E-02
29	GO:0019898: extrinsic component of membrane	1.58E-02
30	GO:0009295: nucleoid	1.99E-02
31	GO:0010319: stromule	1.99E-02
32	GO:0005777: peroxisome	2.40E-02
33	GO:0019005: SCF ubiquitin ligase complex	2.61E-02
34	GO:0005789: endoplasmic reticulum membrane	2.64E-02
35	GO:0016020: membrane	2.71E-02
36	GO:0005874: microtubule	2.90E-02
37	GO:0000502: proteasome complex	4.57E-02