co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G06070

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046677: response to antibiotic	0.00E+00
2	GO:0046620: regulation of organ growth	4.90E-10
3	GO:0009733: response to auxin	3.88E-07
4	GO:0009926: auxin polar transport	2.86E-06
5	GO:0006949: syncytium formation	5.94E-05
6	GO:0043085: positive regulation of catalytic activity	7.05E-05
7	GO:0009750: response to fructose	7.05E-05
8	GO:0009744: response to sucrose	8.51E-05
9	GO:0030388: fructose 1,6-bisphosphate metabolic process	1.44E-04
10	GO:0050992: dimethylallyl diphosphate biosynthetic process	1.44E-04
11	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	1.44E-04
12	GO:0006000: fructose metabolic process	2.46E-04
13	GO:0006696: ergosterol biosynthetic process	2.46E-04
14	GO:2001141: regulation of RNA biosynthetic process	3.57E-04
15	GO:1902476: chloride transmembrane transport	3.57E-04
16	GO:0009734: auxin-activated signaling pathway	3.94E-04
17	GO:2000038: regulation of stomatal complex development	4.78E-04
18	GO:0006542: glutamine biosynthetic process	4.78E-04
19	GO:0019676: ammonia assimilation cycle	4.78E-04
20	GO:0015976: carbon utilization	4.78E-04
21	GO:0009828: plant-type cell wall loosening	4.83E-04
22	GO:0009735: response to cytokinin	4.91E-04
23	GO:0032876: negative regulation of DNA endoreduplication	6.05E-04
24	GO:0030308: negative regulation of cell growth	6.05E-04
25	GO:0009826: unidimensional cell growth	7.31E-04
26	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	7.40E-04
27	GO:1902456: regulation of stomatal opening	7.40E-04
28	GO:0007568: aging	8.51E-04
29	GO:0010019: chloroplast-nucleus signaling pathway	8.82E-04
30	GO:2000037: regulation of stomatal complex patterning	8.82E-04
31	GO:0050829: defense response to Gram-negative bacterium	1.03E-03
32	GO:0006821: chloride transport	1.03E-03
33	GO:0009642: response to light intensity	1.18E-03
34	GO:0006402: mRNA catabolic process	1.18E-03
35	GO:0030091: protein repair	1.18E-03
36	GO:0009231: riboflavin biosynthetic process	1.18E-03
37	GO:0006002: fructose 6-phosphate metabolic process	1.35E-03
38	GO:0071482: cellular response to light stimulus	1.35E-03
39	GO:0009664: plant-type cell wall organization	1.47E-03
40	GO:0009299: mRNA transcription	1.88E-03
41	GO:0009698: phenylpropanoid metabolic process	2.07E-03
42	GO:0006352: DNA-templated transcription, initiation	2.07E-03
43	GO:0009740: gibberellic acid mediated signaling pathway	2.09E-03
44	GO:0042545: cell wall modification	2.16E-03
45	GO:0008361: regulation of cell size	2.27E-03
46	GO:0005983: starch catabolic process	2.27E-03
47	GO:0015706: nitrate transport	2.27E-03
48	GO:0005986: sucrose biosynthetic process	2.47E-03
49	GO:0006829: zinc II ion transport	2.47E-03
50	GO:2000028: regulation of photoperiodism, flowering	2.47E-03
51	GO:0009725: response to hormone	2.47E-03
52	GO:0006094: gluconeogenesis	2.47E-03
53	GO:0010167: response to nitrate	2.89E-03
54	GO:0040008: regulation of growth	3.63E-03
55	GO:0045490: pectin catabolic process	3.80E-03
56	GO:0035428: hexose transmembrane transport	4.05E-03
57	GO:0019748: secondary metabolic process	4.05E-03
58	GO:0009739: response to gibberellin	4.25E-03
59	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.30E-03
60	GO:0007275: multicellular organism development	4.52E-03
61	GO:0006284: base-excision repair	4.55E-03
62	GO:0016117: carotenoid biosynthetic process	4.81E-03
63	GO:0042631: cellular response to water deprivation	5.07E-03
64	GO:0010087: phloem or xylem histogenesis	5.07E-03
65	GO:0006662: glycerol ether metabolic process	5.34E-03
66	GO:0046323: glucose import	5.34E-03
67	GO:0009749: response to glucose	5.89E-03
68	GO:0071554: cell wall organization or biogenesis	6.17E-03
69	GO:0010090: trichome morphogenesis	6.75E-03
70	GO:0080167: response to karrikin	7.26E-03
71	GO:0006979: response to oxidative stress	8.23E-03
72	GO:0015979: photosynthesis	8.29E-03
73	GO:0045454: cell redox homeostasis	8.70E-03
74	GO:0045892: negative regulation of transcription, DNA-templated	8.83E-03
75	GO:0015995: chlorophyll biosynthetic process	8.92E-03
76	GO:0010411: xyloglucan metabolic process	8.92E-03
77	GO:0016311: dephosphorylation	9.25E-03
78	GO:0010119: regulation of stomatal movement	1.06E-02
79	GO:0034599: cellular response to oxidative stress	1.17E-02
80	GO:0008152: metabolic process	1.18E-02
81	GO:0009409: response to cold	1.20E-02
82	GO:0010114: response to red light	1.35E-02
83	GO:0042546: cell wall biogenesis	1.39E-02
84	GO:0009416: response to light stimulus	1.91E-02
85	GO:0009626: plant-type hypersensitive response	1.97E-02
86	GO:0009742: brassinosteroid mediated signaling pathway	2.24E-02
87	GO:0007623: circadian rhythm	3.17E-02

Rank	GO Term	Adjusted P value
1	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
2	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
3	GO:0022883: zinc efflux transmembrane transporter activity	0.00E+00
4	GO:0046905: phytoene synthase activity	0.00E+00
5	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
6	GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	0.00E+00
7	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	2.06E-07
8	GO:0046906: tetrapyrrole binding	5.94E-05
9	GO:0009671: nitrate:proton symporter activity	5.94E-05
10	GO:0051996: squalene synthase activity	5.94E-05
11	GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	5.94E-05
12	GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity	1.44E-04
13	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	1.44E-04
14	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	1.44E-04
15	GO:0043425: bHLH transcription factor binding	1.44E-04
16	GO:0005528: FK506 binding	1.58E-04
17	GO:0003935: GTP cyclohydrolase II activity	2.46E-04
18	GO:0047274: galactinol-sucrose galactosyltransferase activity	2.46E-04
19	GO:0090729: toxin activity	2.46E-04
20	GO:0016987: sigma factor activity	4.78E-04
21	GO:0005253: anion channel activity	4.78E-04
22	GO:0001053: plastid sigma factor activity	4.78E-04
23	GO:0008725: DNA-3-methyladenine glycosylase activity	6.05E-04
24	GO:0051538: 3 iron, 4 sulfur cluster binding	6.05E-04
25	GO:0004356: glutamate-ammonia ligase activity	6.05E-04
26	GO:0005247: voltage-gated chloride channel activity	7.40E-04
27	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	8.82E-04
28	GO:0019899: enzyme binding	1.03E-03
29	GO:0004185: serine-type carboxypeptidase activity	1.18E-03
30	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.37E-03
31	GO:0015112: nitrate transmembrane transporter activity	1.69E-03
32	GO:0045330: aspartyl esterase activity	1.73E-03
33	GO:0008047: enzyme activator activity	1.88E-03
34	GO:0030599: pectinesterase activity	2.09E-03
35	GO:0015035: protein disulfide oxidoreductase activity	2.28E-03
36	GO:0004565: beta-galactosidase activity	2.47E-03
37	GO:0004089: carbonate dehydratase activity	2.47E-03
38	GO:0008146: sulfotransferase activity	2.89E-03
39	GO:0047134: protein-disulfide reductase activity	4.81E-03
40	GO:0004791: thioredoxin-disulfide reductase activity	5.61E-03
41	GO:0005355: glucose transmembrane transporter activity	5.61E-03
42	GO:0016762: xyloglucan:xyloglucosyl transferase activity	6.17E-03
43	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	6.75E-03
44	GO:0016413: O-acetyltransferase activity	7.65E-03
45	GO:0016597: amino acid binding	7.65E-03
46	GO:0016798: hydrolase activity, acting on glycosyl bonds	8.92E-03
47	GO:0003993: acid phosphatase activity	1.17E-02
48	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.67E-02
49	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.93E-02
50	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.52E-02
51	GO:0019843: rRNA binding	2.52E-02
52	GO:0015144: carbohydrate transmembrane transporter activity	2.86E-02
53	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.02E-02
54	GO:0046910: pectinesterase inhibitor activity	3.02E-02
55	GO:0005351: sugar:proton symporter activity	3.12E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	2.53E-04
2	GO:0009570: chloroplast stroma	6.63E-04
3	GO:0034707: chloride channel complex	7.40E-04
4	GO:0005618: cell wall	8.88E-04
5	GO:0009535: chloroplast thylakoid membrane	1.27E-03
6	GO:0009539: photosystem II reaction center	1.35E-03
7	GO:0009505: plant-type cell wall	2.28E-03
8	GO:0009543: chloroplast thylakoid lumen	2.77E-03
9	GO:0005576: extracellular region	2.82E-03
10	GO:0009705: plant-type vacuole membrane	3.80E-03
11	GO:0009579: thylakoid	4.18E-03
12	GO:0005773: vacuole	5.77E-03
13	GO:0071944: cell periphery	6.75E-03
14	GO:0031969: chloroplast membrane	7.26E-03
15	GO:0010319: stromule	7.35E-03
16	GO:0030529: intracellular ribonucleoprotein complex	7.97E-03
17	GO:0015934: large ribosomal subunit	1.06E-02
18	GO:0048046: apoplast	1.15E-02
19	GO:0009941: chloroplast envelope	1.69E-02
20	GO:0009534: chloroplast thylakoid	2.31E-02
21	GO:0010287: plastoglobule	2.43E-02
22	GO:0005623: cell	2.57E-02
23	GO:0005774: vacuolar membrane	3.89E-02