GO Enrichment Analysis of Co-expressed Genes with
AT3G06060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0060416: response to growth hormone | 0.00E+00 |
| 2 | GO:1905499: trichome papilla formation | 0.00E+00 |
| 3 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 4 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 5 | GO:0006642: triglyceride mobilization | 0.00E+00 |
| 6 | GO:0032544: plastid translation | 4.87E-07 |
| 7 | GO:0016998: cell wall macromolecule catabolic process | 8.76E-06 |
| 8 | GO:0010411: xyloglucan metabolic process | 6.65E-05 |
| 9 | GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway | 8.25E-05 |
| 10 | GO:0046166: glyceraldehyde-3-phosphate biosynthetic process | 8.25E-05 |
| 11 | GO:0042546: cell wall biogenesis | 1.69E-04 |
| 12 | GO:0010115: regulation of abscisic acid biosynthetic process | 1.97E-04 |
| 13 | GO:0045717: negative regulation of fatty acid biosynthetic process | 1.97E-04 |
| 14 | GO:0080148: negative regulation of response to water deprivation | 1.97E-04 |
| 15 | GO:0019563: glycerol catabolic process | 3.29E-04 |
| 16 | GO:0032504: multicellular organism reproduction | 3.29E-04 |
| 17 | GO:0006424: glutamyl-tRNA aminoacylation | 4.75E-04 |
| 18 | GO:0046739: transport of virus in multicellular host | 4.75E-04 |
| 19 | GO:0016556: mRNA modification | 4.75E-04 |
| 20 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 6.32E-04 |
| 21 | GO:0006808: regulation of nitrogen utilization | 6.32E-04 |
| 22 | GO:0015976: carbon utilization | 6.32E-04 |
| 23 | GO:0006749: glutathione metabolic process | 6.32E-04 |
| 24 | GO:0032543: mitochondrial translation | 8.00E-04 |
| 25 | GO:0016123: xanthophyll biosynthetic process | 8.00E-04 |
| 26 | GO:0006665: sphingolipid metabolic process | 8.00E-04 |
| 27 | GO:0006561: proline biosynthetic process | 9.77E-04 |
| 28 | GO:0010405: arabinogalactan protein metabolic process | 9.77E-04 |
| 29 | GO:0016554: cytidine to uridine editing | 9.77E-04 |
| 30 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 9.77E-04 |
| 31 | GO:0042372: phylloquinone biosynthetic process | 1.16E-03 |
| 32 | GO:0009658: chloroplast organization | 1.31E-03 |
| 33 | GO:0010444: guard mother cell differentiation | 1.36E-03 |
| 34 | GO:0006955: immune response | 1.36E-03 |
| 35 | GO:0009395: phospholipid catabolic process | 1.36E-03 |
| 36 | GO:0009704: de-etiolation | 1.57E-03 |
| 37 | GO:0010497: plasmodesmata-mediated intercellular transport | 1.79E-03 |
| 38 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.26E-03 |
| 39 | GO:1900865: chloroplast RNA modification | 2.26E-03 |
| 40 | GO:0009688: abscisic acid biosynthetic process | 2.51E-03 |
| 41 | GO:0009750: response to fructose | 2.77E-03 |
| 42 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.77E-03 |
| 43 | GO:0006415: translational termination | 2.77E-03 |
| 44 | GO:0006096: glycolytic process | 2.83E-03 |
| 45 | GO:0071555: cell wall organization | 3.15E-03 |
| 46 | GO:0006094: gluconeogenesis | 3.31E-03 |
| 47 | GO:0010207: photosystem II assembly | 3.59E-03 |
| 48 | GO:0010020: chloroplast fission | 3.59E-03 |
| 49 | GO:0019253: reductive pentose-phosphate cycle | 3.59E-03 |
| 50 | GO:0010025: wax biosynthetic process | 4.18E-03 |
| 51 | GO:0040008: regulation of growth | 5.59E-03 |
| 52 | GO:0010091: trichome branching | 6.13E-03 |
| 53 | GO:0042127: regulation of cell proliferation | 6.13E-03 |
| 54 | GO:0019722: calcium-mediated signaling | 6.13E-03 |
| 55 | GO:0080022: primary root development | 6.83E-03 |
| 56 | GO:0042335: cuticle development | 6.83E-03 |
| 57 | GO:0010182: sugar mediated signaling pathway | 7.20E-03 |
| 58 | GO:0071554: cell wall organization or biogenesis | 8.33E-03 |
| 59 | GO:0010583: response to cyclopentenone | 8.73E-03 |
| 60 | GO:0016032: viral process | 8.73E-03 |
| 61 | GO:0016125: sterol metabolic process | 9.53E-03 |
| 62 | GO:0007267: cell-cell signaling | 9.94E-03 |
| 63 | GO:0010027: thylakoid membrane organization | 1.08E-02 |
| 64 | GO:0016126: sterol biosynthetic process | 1.08E-02 |
| 65 | GO:0042128: nitrate assimilation | 1.17E-02 |
| 66 | GO:0016311: dephosphorylation | 1.26E-02 |
| 67 | GO:0009817: defense response to fungus, incompatible interaction | 1.30E-02 |
| 68 | GO:0000160: phosphorelay signal transduction system | 1.35E-02 |
| 69 | GO:0009407: toxin catabolic process | 1.39E-02 |
| 70 | GO:0048527: lateral root development | 1.44E-02 |
| 71 | GO:0030001: metal ion transport | 1.69E-02 |
| 72 | GO:0009636: response to toxic substance | 2.00E-02 |
| 73 | GO:0042538: hyperosmotic salinity response | 2.16E-02 |
| 74 | GO:0009736: cytokinin-activated signaling pathway | 2.28E-02 |
| 75 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.33E-02 |
| 76 | GO:0006857: oligopeptide transport | 2.39E-02 |
| 77 | GO:0048316: seed development | 2.62E-02 |
| 78 | GO:0051726: regulation of cell cycle | 3.05E-02 |
| 79 | GO:0009742: brassinosteroid mediated signaling pathway | 3.05E-02 |
| 80 | GO:0009790: embryo development | 3.83E-02 |
| 81 | GO:0006633: fatty acid biosynthetic process | 4.04E-02 |
| 82 | GO:0016310: phosphorylation | 4.35E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 2 | GO:0004496: mevalonate kinase activity | 0.00E+00 |
| 3 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 4 | GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 5 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.88E-05 |
| 6 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 6.65E-05 |
| 7 | GO:0004328: formamidase activity | 8.25E-05 |
| 8 | GO:0004807: triose-phosphate isomerase activity | 8.25E-05 |
| 9 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 8.25E-05 |
| 10 | GO:0042834: peptidoglycan binding | 8.25E-05 |
| 11 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 8.25E-05 |
| 12 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.97E-04 |
| 13 | GO:0017150: tRNA dihydrouridine synthase activity | 3.29E-04 |
| 14 | GO:0016149: translation release factor activity, codon specific | 4.75E-04 |
| 15 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 4.75E-04 |
| 16 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 4.75E-04 |
| 17 | GO:0043023: ribosomal large subunit binding | 4.75E-04 |
| 18 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 4.75E-04 |
| 19 | GO:0016836: hydro-lyase activity | 6.32E-04 |
| 20 | GO:0009922: fatty acid elongase activity | 8.00E-04 |
| 21 | GO:0016208: AMP binding | 9.77E-04 |
| 22 | GO:0080030: methyl indole-3-acetate esterase activity | 9.77E-04 |
| 23 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 9.77E-04 |
| 24 | GO:0051920: peroxiredoxin activity | 1.16E-03 |
| 25 | GO:0016788: hydrolase activity, acting on ester bonds | 1.34E-03 |
| 26 | GO:0003993: acid phosphatase activity | 1.46E-03 |
| 27 | GO:0016209: antioxidant activity | 1.57E-03 |
| 28 | GO:0003747: translation release factor activity | 2.02E-03 |
| 29 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 2.02E-03 |
| 30 | GO:0004022: alcohol dehydrogenase (NAD) activity | 3.31E-03 |
| 31 | GO:0004089: carbonate dehydratase activity | 3.31E-03 |
| 32 | GO:0019843: rRNA binding | 4.25E-03 |
| 33 | GO:0003713: transcription coactivator activity | 7.20E-03 |
| 34 | GO:0008080: N-acetyltransferase activity | 7.20E-03 |
| 35 | GO:0050662: coenzyme binding | 7.57E-03 |
| 36 | GO:0000156: phosphorelay response regulator activity | 9.12E-03 |
| 37 | GO:0016413: O-acetyltransferase activity | 1.04E-02 |
| 38 | GO:0052689: carboxylic ester hydrolase activity | 1.24E-02 |
| 39 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.39E-02 |
| 40 | GO:0003746: translation elongation factor activity | 1.54E-02 |
| 41 | GO:0004364: glutathione transferase activity | 1.79E-02 |
| 42 | GO:0004519: endonuclease activity | 1.81E-02 |
| 43 | GO:0004185: serine-type carboxypeptidase activity | 1.84E-02 |
| 44 | GO:0015293: symporter activity | 2.00E-02 |
| 45 | GO:0046983: protein dimerization activity | 2.05E-02 |
| 46 | GO:0003777: microtubule motor activity | 2.45E-02 |
| 47 | GO:0004650: polygalacturonase activity | 2.74E-02 |
| 48 | GO:0016758: transferase activity, transferring hexosyl groups | 3.37E-02 |
| 49 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.50E-02 |
| 50 | GO:0016740: transferase activity | 3.60E-02 |
| 51 | GO:0016787: hydrolase activity | 3.69E-02 |
| 52 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.89E-02 |
| 53 | GO:0008017: microtubule binding | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009923: fatty acid elongase complex | 8.25E-05 |
| 2 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 8.25E-05 |
| 3 | GO:0005853: eukaryotic translation elongation factor 1 complex | 3.29E-04 |
| 4 | GO:0009941: chloroplast envelope | 8.55E-04 |
| 5 | GO:0009536: plastid | 9.67E-04 |
| 6 | GO:0009507: chloroplast | 1.25E-03 |
| 7 | GO:0009570: chloroplast stroma | 1.76E-03 |
| 8 | GO:0005576: extracellular region | 3.11E-03 |
| 9 | GO:0048046: apoplast | 6.46E-03 |
| 10 | GO:0009579: thylakoid | 7.27E-03 |
| 11 | GO:0005618: cell wall | 7.50E-03 |
| 12 | GO:0005778: peroxisomal membrane | 9.94E-03 |
| 13 | GO:0000151: ubiquitin ligase complex | 1.30E-02 |
| 14 | GO:0015934: large ribosomal subunit | 1.44E-02 |
| 15 | GO:0005819: spindle | 1.64E-02 |
| 16 | GO:0009706: chloroplast inner membrane | 2.93E-02 |
| 17 | GO:0009543: chloroplast thylakoid lumen | 3.43E-02 |
| 18 | GO:0005615: extracellular space | 4.67E-02 |