co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G05900

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901698: response to nitrogen compound	0.00E+00
2	GO:0070509: calcium ion import	2.88E-05
3	GO:0007263: nitric oxide mediated signal transduction	2.88E-05
4	GO:0006723: cuticle hydrocarbon biosynthetic process	2.88E-05
5	GO:0042547: cell wall modification involved in multidimensional cell growth	2.88E-05
6	GO:0034628: 'de novo' NAD biosynthetic process from aspartate	2.88E-05
7	GO:0016119: carotene metabolic process	2.88E-05
8	GO:0006833: water transport	4.96E-05
9	GO:0009742: brassinosteroid mediated signaling pathway	6.11E-05
10	GO:0016560: protein import into peroxisome matrix, docking	7.28E-05
11	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	7.28E-05
12	GO:0006695: cholesterol biosynthetic process	7.28E-05
13	GO:0034220: ion transmembrane transport	1.13E-04
14	GO:0009741: response to brassinosteroid	1.23E-04
15	GO:0051176: positive regulation of sulfur metabolic process	1.27E-04
16	GO:0043447: alkane biosynthetic process	1.27E-04
17	GO:0071705: nitrogen compound transport	1.27E-04
18	GO:0006515: misfolded or incompletely synthesized protein catabolic process	1.89E-04
19	GO:0071249: cellular response to nitrate	2.57E-04
20	GO:0046785: microtubule polymerization	3.30E-04
21	GO:0016123: xanthophyll biosynthetic process	3.30E-04
22	GO:0009435: NAD biosynthetic process	3.30E-04
23	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	4.06E-04
24	GO:1900057: positive regulation of leaf senescence	5.68E-04
25	GO:0051510: regulation of unidimensional cell growth	5.68E-04
26	GO:0006402: mRNA catabolic process	6.55E-04
27	GO:0008610: lipid biosynthetic process	6.55E-04
28	GO:0009626: plant-type hypersensitive response	8.10E-04
29	GO:0033384: geranyl diphosphate biosynthetic process	8.35E-04
30	GO:0009060: aerobic respiration	8.35E-04
31	GO:0009051: pentose-phosphate shunt, oxidative branch	8.35E-04
32	GO:0045337: farnesyl diphosphate biosynthetic process	8.35E-04
33	GO:0016485: protein processing	1.13E-03
34	GO:0015706: nitrate transport	1.23E-03
35	GO:2000028: regulation of photoperiodism, flowering	1.34E-03
36	GO:0040008: regulation of growth	1.46E-03
37	GO:0010167: response to nitrate	1.56E-03
38	GO:0010025: wax biosynthetic process	1.67E-03
39	GO:0009814: defense response, incompatible interaction	2.17E-03
40	GO:0016226: iron-sulfur cluster assembly	2.17E-03
41	GO:0009826: unidimensional cell growth	2.26E-03
42	GO:0040007: growth	2.30E-03
43	GO:0019722: calcium-mediated signaling	2.43E-03
44	GO:0042335: cuticle development	2.70E-03
45	GO:0042391: regulation of membrane potential	2.70E-03
46	GO:0045489: pectin biosynthetic process	2.84E-03
47	GO:0046777: protein autophosphorylation	3.09E-03
48	GO:0009791: post-embryonic development	3.13E-03
49	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.28E-03
50	GO:0048235: pollen sperm cell differentiation	3.43E-03
51	GO:0010090: trichome morphogenesis	3.58E-03
52	GO:0007267: cell-cell signaling	3.89E-03
53	GO:0071805: potassium ion transmembrane transport	3.89E-03
54	GO:0006629: lipid metabolic process	4.25E-03
55	GO:0048527: lateral root development	5.58E-03
56	GO:0016051: carbohydrate biosynthetic process	5.94E-03
57	GO:0009640: photomorphogenesis	7.08E-03
58	GO:0009585: red, far-red light phototransduction	8.71E-03
59	GO:0006813: potassium ion transport	8.71E-03
60	GO:0006857: oligopeptide transport	9.14E-03
61	GO:0055085: transmembrane transport	9.54E-03
62	GO:0006096: glycolytic process	9.79E-03
63	GO:0009740: gibberellic acid mediated signaling pathway	1.07E-02
64	GO:0045490: pectin catabolic process	1.64E-02
65	GO:0007166: cell surface receptor signaling pathway	1.81E-02
66	GO:0006810: transport	2.24E-02
67	GO:0009734: auxin-activated signaling pathway	4.40E-02
68	GO:0009908: flower development	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0005222: intracellular cAMP activated cation channel activity	0.00E+00
2	GO:0008987: quinolinate synthetase A activity	0.00E+00
3	GO:0005221: intracellular cyclic nucleotide activated cation channel activity	2.88E-05
4	GO:0010291: carotene beta-ring hydroxylase activity	7.28E-05
5	GO:0017057: 6-phosphogluconolactonase activity	1.89E-04
6	GO:0015250: water channel activity	2.28E-04
7	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	2.57E-04
8	GO:0005242: inward rectifier potassium channel activity	4.86E-04
9	GO:0005261: cation channel activity	4.86E-04
10	GO:0004337: geranyltranstransferase activity	8.35E-04
11	GO:0008047: enzyme activator activity	1.03E-03
12	GO:0004161: dimethylallyltranstransferase activity	1.13E-03
13	GO:0008081: phosphoric diester hydrolase activity	1.34E-03
14	GO:0005262: calcium channel activity	1.34E-03
15	GO:0004190: aspartic-type endopeptidase activity	1.56E-03
16	GO:0030552: cAMP binding	1.56E-03
17	GO:0030553: cGMP binding	1.56E-03
18	GO:0005216: ion channel activity	1.92E-03
19	GO:0015079: potassium ion transmembrane transporter activity	1.92E-03
20	GO:0004176: ATP-dependent peptidase activity	2.04E-03
21	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.04E-03
22	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.17E-03
23	GO:0030570: pectate lyase activity	2.30E-03
24	GO:0030551: cyclic nucleotide binding	2.70E-03
25	GO:0046983: protein dimerization activity	3.58E-03
26	GO:0004871: signal transducer activity	3.61E-03
27	GO:0008236: serine-type peptidase activity	4.88E-03
28	GO:0051539: 4 iron, 4 sulfur cluster binding	6.50E-03
29	GO:0035091: phosphatidylinositol binding	7.48E-03
30	GO:0016829: lyase activity	1.38E-02
31	GO:0004252: serine-type endopeptidase activity	1.41E-02
32	GO:0005506: iron ion binding	1.50E-02
33	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.56E-02
34	GO:0003824: catalytic activity	1.67E-02
35	GO:0008017: microtubule binding	1.70E-02
36	GO:0042802: identical protein binding	1.95E-02
37	GO:0016491: oxidoreductase activity	2.01E-02
38	GO:0004672: protein kinase activity	2.24E-02
39	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.26E-02
40	GO:0008233: peptidase activity	2.58E-02
41	GO:0042803: protein homodimerization activity	3.07E-02
42	GO:0016787: hydrolase activity	3.27E-02

Rank	GO Term	Adjusted P value
1	GO:0043233: organelle lumen	0.00E+00
2	GO:0005886: plasma membrane	1.90E-05
3	GO:0005782: peroxisomal matrix	1.27E-04
4	GO:0030660: Golgi-associated vesicle membrane	2.57E-04
5	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	2.57E-04
6	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	6.55E-04
7	GO:0005887: integral component of plasma membrane	7.43E-04
8	GO:0008180: COP9 signalosome	8.35E-04
9	GO:0055028: cortical microtubule	1.03E-03
10	GO:0005765: lysosomal membrane	1.13E-03
11	GO:0009506: plasmodesma	1.42E-03
12	GO:0030659: cytoplasmic vesicle membrane	1.45E-03
13	GO:0046658: anchored component of plasma membrane	2.01E-03
14	GO:0030529: intracellular ribonucleoprotein complex	4.21E-03
15	GO:0019005: SCF ubiquitin ligase complex	5.05E-03
16	GO:0000502: proteasome complex	8.71E-03
17	GO:0010008: endosome membrane	1.00E-02
18	GO:0031225: anchored component of membrane	1.17E-02
19	GO:0009536: plastid	1.87E-02
20	GO:0005874: microtubule	2.55E-02
21	GO:0031969: chloroplast membrane	2.61E-02