GO Enrichment Analysis of Co-expressed Genes with
AT3G05180
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 2 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 3 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 4 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.37E-06 |
| 5 | GO:0006633: fatty acid biosynthetic process | 8.53E-06 |
| 6 | GO:0010411: xyloglucan metabolic process | 3.56E-05 |
| 7 | GO:0016123: xanthophyll biosynthetic process | 5.76E-05 |
| 8 | GO:0016998: cell wall macromolecule catabolic process | 7.94E-05 |
| 9 | GO:0042372: phylloquinone biosynthetic process | 1.17E-04 |
| 10 | GO:0042546: cell wall biogenesis | 1.18E-04 |
| 11 | GO:0042371: vitamin K biosynthetic process | 2.25E-04 |
| 12 | GO:0060627: regulation of vesicle-mediated transport | 2.25E-04 |
| 13 | GO:0032544: plastid translation | 2.44E-04 |
| 14 | GO:0015995: chlorophyll biosynthetic process | 4.54E-04 |
| 15 | GO:0006415: translational termination | 4.76E-04 |
| 16 | GO:0010198: synergid death | 5.00E-04 |
| 17 | GO:0045717: negative regulation of fatty acid biosynthetic process | 5.00E-04 |
| 18 | GO:0010207: photosystem II assembly | 6.96E-04 |
| 19 | GO:0090506: axillary shoot meristem initiation | 8.13E-04 |
| 20 | GO:1902448: positive regulation of shade avoidance | 8.13E-04 |
| 21 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 8.13E-04 |
| 22 | GO:0010371: regulation of gibberellin biosynthetic process | 1.16E-03 |
| 23 | GO:0016556: mRNA modification | 1.16E-03 |
| 24 | GO:0006424: glutamyl-tRNA aminoacylation | 1.16E-03 |
| 25 | GO:0046739: transport of virus in multicellular host | 1.16E-03 |
| 26 | GO:0009765: photosynthesis, light harvesting | 1.54E-03 |
| 27 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 1.54E-03 |
| 28 | GO:0016117: carotenoid biosynthetic process | 1.60E-03 |
| 29 | GO:0000413: protein peptidyl-prolyl isomerization | 1.73E-03 |
| 30 | GO:0016120: carotene biosynthetic process | 1.97E-03 |
| 31 | GO:0045487: gibberellin catabolic process | 1.97E-03 |
| 32 | GO:0000304: response to singlet oxygen | 1.97E-03 |
| 33 | GO:0032543: mitochondrial translation | 1.97E-03 |
| 34 | GO:0010236: plastoquinone biosynthetic process | 1.97E-03 |
| 35 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.97E-03 |
| 36 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.18E-03 |
| 37 | GO:0071555: cell wall organization | 2.25E-03 |
| 38 | GO:0071554: cell wall organization or biogenesis | 2.30E-03 |
| 39 | GO:0010405: arabinogalactan protein metabolic process | 2.43E-03 |
| 40 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.43E-03 |
| 41 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.43E-03 |
| 42 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.43E-03 |
| 43 | GO:0006796: phosphate-containing compound metabolic process | 2.43E-03 |
| 44 | GO:0010190: cytochrome b6f complex assembly | 2.43E-03 |
| 45 | GO:0006014: D-ribose metabolic process | 2.43E-03 |
| 46 | GO:0010067: procambium histogenesis | 2.91E-03 |
| 47 | GO:2000033: regulation of seed dormancy process | 2.91E-03 |
| 48 | GO:0010027: thylakoid membrane organization | 3.31E-03 |
| 49 | GO:0006955: immune response | 3.43E-03 |
| 50 | GO:0009395: phospholipid catabolic process | 3.43E-03 |
| 51 | GO:0009772: photosynthetic electron transport in photosystem II | 3.43E-03 |
| 52 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 3.43E-03 |
| 53 | GO:0010047: fruit dehiscence | 3.43E-03 |
| 54 | GO:0048564: photosystem I assembly | 3.98E-03 |
| 55 | GO:0009817: defense response to fungus, incompatible interaction | 4.31E-03 |
| 56 | GO:0010497: plasmodesmata-mediated intercellular transport | 4.56E-03 |
| 57 | GO:0009657: plastid organization | 4.56E-03 |
| 58 | GO:0006526: arginine biosynthetic process | 4.56E-03 |
| 59 | GO:0009407: toxin catabolic process | 4.75E-03 |
| 60 | GO:0006754: ATP biosynthetic process | 5.16E-03 |
| 61 | GO:0010206: photosystem II repair | 5.16E-03 |
| 62 | GO:0016051: carbohydrate biosynthetic process | 5.46E-03 |
| 63 | GO:0043069: negative regulation of programmed cell death | 6.45E-03 |
| 64 | GO:0010162: seed dormancy process | 6.45E-03 |
| 65 | GO:0018119: peptidyl-cysteine S-nitrosylation | 7.13E-03 |
| 66 | GO:0009073: aromatic amino acid family biosynthetic process | 7.13E-03 |
| 67 | GO:0009658: chloroplast organization | 7.57E-03 |
| 68 | GO:0042254: ribosome biogenesis | 7.75E-03 |
| 69 | GO:0006820: anion transport | 7.84E-03 |
| 70 | GO:0016024: CDP-diacylglycerol biosynthetic process | 7.84E-03 |
| 71 | GO:0009636: response to toxic substance | 7.91E-03 |
| 72 | GO:0010223: secondary shoot formation | 9.33E-03 |
| 73 | GO:0010030: positive regulation of seed germination | 1.01E-02 |
| 74 | GO:0071732: cellular response to nitric oxide | 1.01E-02 |
| 75 | GO:0015979: photosynthesis | 1.18E-02 |
| 76 | GO:0031408: oxylipin biosynthetic process | 1.34E-02 |
| 77 | GO:0035428: hexose transmembrane transport | 1.43E-02 |
| 78 | GO:0071369: cellular response to ethylene stimulus | 1.53E-02 |
| 79 | GO:0001944: vasculature development | 1.53E-02 |
| 80 | GO:0010089: xylem development | 1.62E-02 |
| 81 | GO:0019722: calcium-mediated signaling | 1.62E-02 |
| 82 | GO:0009306: protein secretion | 1.62E-02 |
| 83 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.71E-02 |
| 84 | GO:0009753: response to jasmonic acid | 1.79E-02 |
| 85 | GO:0010087: phloem or xylem histogenesis | 1.81E-02 |
| 86 | GO:0042631: cellular response to water deprivation | 1.81E-02 |
| 87 | GO:0000271: polysaccharide biosynthetic process | 1.81E-02 |
| 88 | GO:0010182: sugar mediated signaling pathway | 1.91E-02 |
| 89 | GO:0046323: glucose import | 1.91E-02 |
| 90 | GO:0045489: pectin biosynthetic process | 1.91E-02 |
| 91 | GO:0006520: cellular amino acid metabolic process | 1.91E-02 |
| 92 | GO:0019252: starch biosynthetic process | 2.11E-02 |
| 93 | GO:0071281: cellular response to iron ion | 2.43E-02 |
| 94 | GO:0016125: sterol metabolic process | 2.54E-02 |
| 95 | GO:0009739: response to gibberellin | 2.63E-02 |
| 96 | GO:0007267: cell-cell signaling | 2.65E-02 |
| 97 | GO:0016126: sterol biosynthetic process | 2.88E-02 |
| 98 | GO:0042128: nitrate assimilation | 3.12E-02 |
| 99 | GO:0016311: dephosphorylation | 3.36E-02 |
| 100 | GO:0030001: metal ion transport | 4.52E-02 |
| 101 | GO:0006631: fatty acid metabolic process | 4.66E-02 |
| 102 | GO:0046686: response to cadmium ion | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 2 | GO:0005048: signal sequence binding | 0.00E+00 |
| 3 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 4 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 5 | GO:0004496: mevalonate kinase activity | 0.00E+00 |
| 6 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 7 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 8 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 9 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 10 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 2.37E-06 |
| 11 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.19E-05 |
| 12 | GO:0016851: magnesium chelatase activity | 1.97E-05 |
| 13 | GO:0016149: translation release factor activity, codon specific | 1.97E-05 |
| 14 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.56E-05 |
| 15 | GO:0051920: peroxiredoxin activity | 1.17E-04 |
| 16 | GO:0016209: antioxidant activity | 1.97E-04 |
| 17 | GO:0004328: formamidase activity | 2.25E-04 |
| 18 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 2.25E-04 |
| 19 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 2.25E-04 |
| 20 | GO:0004560: alpha-L-fucosidase activity | 2.25E-04 |
| 21 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 2.25E-04 |
| 22 | GO:0042834: peptidoglycan binding | 2.25E-04 |
| 23 | GO:0080132: fatty acid alpha-hydroxylase activity | 2.25E-04 |
| 24 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 2.25E-04 |
| 25 | GO:0003747: translation release factor activity | 2.95E-04 |
| 26 | GO:0030267: glyoxylate reductase (NADP) activity | 8.13E-04 |
| 27 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 8.13E-04 |
| 28 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 8.13E-04 |
| 29 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 8.13E-04 |
| 30 | GO:0043023: ribosomal large subunit binding | 1.16E-03 |
| 31 | GO:0008097: 5S rRNA binding | 1.16E-03 |
| 32 | GO:0001872: (1->3)-beta-D-glucan binding | 1.16E-03 |
| 33 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.16E-03 |
| 34 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.16E-03 |
| 35 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1.16E-03 |
| 36 | GO:0004659: prenyltransferase activity | 1.54E-03 |
| 37 | GO:0016836: hydro-lyase activity | 1.54E-03 |
| 38 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.54E-03 |
| 39 | GO:0052793: pectin acetylesterase activity | 1.54E-03 |
| 40 | GO:0016788: hydrolase activity, acting on ester bonds | 1.54E-03 |
| 41 | GO:0008381: mechanically-gated ion channel activity | 1.97E-03 |
| 42 | GO:0008200: ion channel inhibitor activity | 2.43E-03 |
| 43 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.43E-03 |
| 44 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.43E-03 |
| 45 | GO:0016208: AMP binding | 2.43E-03 |
| 46 | GO:0016758: transferase activity, transferring hexosyl groups | 2.79E-03 |
| 47 | GO:0019843: rRNA binding | 2.88E-03 |
| 48 | GO:0015631: tubulin binding | 2.91E-03 |
| 49 | GO:0004747: ribokinase activity | 2.91E-03 |
| 50 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.91E-03 |
| 51 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.98E-03 |
| 52 | GO:0016413: O-acetyltransferase activity | 3.13E-03 |
| 53 | GO:0004427: inorganic diphosphatase activity | 3.43E-03 |
| 54 | GO:0043295: glutathione binding | 3.43E-03 |
| 55 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.70E-03 |
| 56 | GO:0008312: 7S RNA binding | 3.98E-03 |
| 57 | GO:0008865: fructokinase activity | 3.98E-03 |
| 58 | GO:0008236: serine-type peptidase activity | 4.10E-03 |
| 59 | GO:0005507: copper ion binding | 4.22E-03 |
| 60 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 5.16E-03 |
| 61 | GO:0003993: acid phosphatase activity | 5.71E-03 |
| 62 | GO:0047617: acyl-CoA hydrolase activity | 5.79E-03 |
| 63 | GO:0004364: glutathione transferase activity | 6.76E-03 |
| 64 | GO:0008378: galactosyltransferase activity | 7.84E-03 |
| 65 | GO:0004565: beta-galactosidase activity | 8.57E-03 |
| 66 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.09E-02 |
| 67 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.09E-02 |
| 68 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.09E-02 |
| 69 | GO:0052689: carboxylic ester hydrolase activity | 1.13E-02 |
| 70 | GO:0005528: FK506 binding | 1.17E-02 |
| 71 | GO:0043424: protein histidine kinase binding | 1.26E-02 |
| 72 | GO:0008324: cation transmembrane transporter activity | 1.26E-02 |
| 73 | GO:0033612: receptor serine/threonine kinase binding | 1.34E-02 |
| 74 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.43E-02 |
| 75 | GO:0005102: receptor binding | 1.71E-02 |
| 76 | GO:0003713: transcription coactivator activity | 1.91E-02 |
| 77 | GO:0005355: glucose transmembrane transporter activity | 2.01E-02 |
| 78 | GO:0019901: protein kinase binding | 2.11E-02 |
| 79 | GO:0005506: iron ion binding | 2.52E-02 |
| 80 | GO:0030247: polysaccharide binding | 3.24E-02 |
| 81 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.48E-02 |
| 82 | GO:0000287: magnesium ion binding | 3.56E-02 |
| 83 | GO:0004601: peroxidase activity | 3.63E-02 |
| 84 | GO:0016491: oxidoreductase activity | 3.85E-02 |
| 85 | GO:0046983: protein dimerization activity | 3.93E-02 |
| 86 | GO:0016740: transferase activity | 4.28E-02 |
| 87 | GO:0004497: monooxygenase activity | 4.49E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 5.99E-17 |
| 3 | GO:0009570: chloroplast stroma | 1.91E-13 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 3.87E-10 |
| 5 | GO:0031977: thylakoid lumen | 7.02E-09 |
| 6 | GO:0009579: thylakoid | 3.64E-08 |
| 7 | GO:0009534: chloroplast thylakoid | 4.17E-06 |
| 8 | GO:0010007: magnesium chelatase complex | 8.63E-06 |
| 9 | GO:0031225: anchored component of membrane | 1.13E-05 |
| 10 | GO:0009941: chloroplast envelope | 9.78E-05 |
| 11 | GO:0048046: apoplast | 1.38E-04 |
| 12 | GO:0009533: chloroplast stromal thylakoid | 1.54E-04 |
| 13 | GO:0046658: anchored component of plasma membrane | 2.06E-04 |
| 14 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 2.25E-04 |
| 15 | GO:0009535: chloroplast thylakoid membrane | 3.75E-04 |
| 16 | GO:0031969: chloroplast membrane | 4.16E-04 |
| 17 | GO:0080085: signal recognition particle, chloroplast targeting | 5.00E-04 |
| 18 | GO:0005886: plasma membrane | 2.66E-03 |
| 19 | GO:0009505: plant-type cell wall | 3.52E-03 |
| 20 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 4.56E-03 |
| 21 | GO:0005618: cell wall | 4.66E-03 |
| 22 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.16E-03 |
| 23 | GO:0000311: plastid large ribosomal subunit | 7.84E-03 |
| 24 | GO:0009508: plastid chromosome | 8.57E-03 |
| 25 | GO:0030095: chloroplast photosystem II | 9.33E-03 |
| 26 | GO:0043234: protein complex | 1.09E-02 |
| 27 | GO:0009536: plastid | 1.11E-02 |
| 28 | GO:0009654: photosystem II oxygen evolving complex | 1.26E-02 |
| 29 | GO:0016020: membrane | 1.54E-02 |
| 30 | GO:0010287: plastoglobule | 1.61E-02 |
| 31 | GO:0019898: extrinsic component of membrane | 2.11E-02 |
| 32 | GO:0005778: peroxisomal membrane | 2.65E-02 |
| 33 | GO:0009295: nucleoid | 2.65E-02 |
| 34 | GO:0030529: intracellular ribonucleoprotein complex | 2.88E-02 |
| 35 | GO:0005576: extracellular region | 3.83E-02 |