Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G04820

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006592: ornithine biosynthetic process0.00E+00
2GO:0034976: response to endoplasmic reticulum stress1.40E-09
3GO:0045454: cell redox homeostasis1.41E-08
4GO:0046686: response to cadmium ion2.76E-07
5GO:0006457: protein folding3.66E-07
6GO:0006102: isocitrate metabolic process5.95E-06
7GO:0006099: tricarboxylic acid cycle9.71E-06
8GO:0006007: glucose catabolic process2.41E-05
9GO:0019673: GDP-mannose metabolic process2.41E-05
10GO:0043266: regulation of potassium ion transport2.41E-05
11GO:0051938: L-glutamate import2.41E-05
12GO:0006101: citrate metabolic process6.16E-05
13GO:0043091: L-arginine import6.16E-05
14GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.09E-04
15GO:0072334: UDP-galactose transmembrane transport1.62E-04
16GO:0051365: cellular response to potassium ion starvation2.21E-04
17GO:0010043: response to zinc ion2.78E-04
18GO:0009697: salicylic acid biosynthetic process2.84E-04
19GO:0006097: glyoxylate cycle2.84E-04
20GO:0006465: signal peptide processing2.84E-04
21GO:0009651: response to salt stress3.20E-04
22GO:0006014: D-ribose metabolic process3.51E-04
23GO:0010555: response to mannitol4.20E-04
24GO:0006605: protein targeting5.68E-04
25GO:0055075: potassium ion homeostasis5.68E-04
26GO:0006526: arginine biosynthetic process6.45E-04
27GO:0030968: endoplasmic reticulum unfolded protein response6.45E-04
28GO:0009553: embryo sac development7.15E-04
29GO:0009555: pollen development7.83E-04
30GO:0010205: photoinhibition8.07E-04
31GO:0043067: regulation of programmed cell death8.07E-04
32GO:0018107: peptidyl-threonine phosphorylation1.16E-03
33GO:0090351: seedling development1.35E-03
34GO:0000162: tryptophan biosynthetic process1.45E-03
35GO:0006508: proteolysis1.50E-03
36GO:0003333: amino acid transmembrane transport1.76E-03
37GO:0031348: negative regulation of defense response1.87E-03
38GO:0019722: calcium-mediated signaling2.10E-03
39GO:0010118: stomatal movement2.33E-03
40GO:0048868: pollen tube development2.45E-03
41GO:0019252: starch biosynthetic process2.70E-03
42GO:0009567: double fertilization forming a zygote and endosperm3.22E-03
43GO:0009607: response to biotic stimulus3.76E-03
44GO:0008219: cell death4.34E-03
45GO:0045087: innate immune response5.11E-03
46GO:0009735: response to cytokinin5.50E-03
47GO:0009644: response to high light intensity6.42E-03
48GO:0006855: drug transmembrane transport6.76E-03
49GO:0009846: pollen germination7.11E-03
50GO:0006096: glycolytic process8.40E-03
51GO:0048316: seed development8.59E-03
52GO:0009624: response to nematode9.56E-03
53GO:0018105: peptidyl-serine phosphorylation9.75E-03
54GO:0006979: response to oxidative stress1.23E-02
55GO:0009790: embryo development1.25E-02
56GO:0040008: regulation of growth1.36E-02
57GO:0009826: unidimensional cell growth1.86E-02
58GO:0006886: intracellular protein transport2.59E-02
59GO:0032259: methylation2.86E-02
60GO:0009751: response to salicylic acid2.92E-02
61GO:0009734: auxin-activated signaling pathway3.76E-02
62GO:0009611: response to wounding4.50E-02
63GO:0035556: intracellular signal transduction4.61E-02
RankGO TermAdjusted P value
1GO:0050220: prostaglandin-E synthase activity0.00E+00
2GO:0008777: acetylornithine deacetylase activity0.00E+00
3GO:0003756: protein disulfide isomerase activity5.44E-09
4GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity2.41E-05
5GO:0004425: indole-3-glycerol-phosphate synthase activity2.41E-05
6GO:0008446: GDP-mannose 4,6-dehydratase activity2.41E-05
7GO:0004775: succinate-CoA ligase (ADP-forming) activity6.16E-05
8GO:0018708: thiol S-methyltransferase activity6.16E-05
9GO:0015036: disulfide oxidoreductase activity6.16E-05
10GO:0004776: succinate-CoA ligase (GDP-forming) activity6.16E-05
11GO:0003994: aconitate hydratase activity6.16E-05
12GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity6.16E-05
13GO:0015181: arginine transmembrane transporter activity1.62E-04
14GO:0004449: isocitrate dehydrogenase (NAD+) activity1.62E-04
15GO:0005460: UDP-glucose transmembrane transporter activity1.62E-04
16GO:0015189: L-lysine transmembrane transporter activity1.62E-04
17GO:0005313: L-glutamate transmembrane transporter activity2.21E-04
18GO:0008233: peptidase activity2.23E-04
19GO:0005509: calcium ion binding2.37E-04
20GO:0015301: anion:anion antiporter activity2.84E-04
21GO:0005459: UDP-galactose transmembrane transporter activity2.84E-04
22GO:0005452: inorganic anion exchanger activity2.84E-04
23GO:0004747: ribokinase activity4.20E-04
24GO:0051920: peroxiredoxin activity4.20E-04
25GO:0008865: fructokinase activity5.68E-04
26GO:0016209: antioxidant activity5.68E-04
27GO:0051082: unfolded protein binding7.36E-04
28GO:0015174: basic amino acid transmembrane transporter activity8.07E-04
29GO:0004129: cytochrome-c oxidase activity9.78E-04
30GO:0005507: copper ion binding1.21E-03
31GO:0004190: aspartic-type endopeptidase activity1.35E-03
32GO:0051536: iron-sulfur cluster binding1.55E-03
33GO:0004298: threonine-type endopeptidase activity1.76E-03
34GO:0016853: isomerase activity2.57E-03
35GO:0008237: metallopeptidase activity3.35E-03
36GO:0009055: electron carrier activity3.65E-03
37GO:0015238: drug transmembrane transporter activity4.49E-03
38GO:0030145: manganese ion binding4.80E-03
39GO:0051539: 4 iron, 4 sulfur cluster binding5.59E-03
40GO:0016740: transferase activity7.34E-03
41GO:0015171: amino acid transmembrane transporter activity8.02E-03
42GO:0030246: carbohydrate binding8.09E-03
43GO:0015035: protein disulfide oxidoreductase activity9.75E-03
44GO:0015297: antiporter activity1.36E-02
45GO:0008168: methyltransferase activity1.86E-02
46GO:0004601: peroxidase activity1.92E-02
RankGO TermAdjusted P value
1GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
2GO:0005788: endoplasmic reticulum lumen4.26E-08
3GO:0005783: endoplasmic reticulum2.90E-07
4GO:0005787: signal peptidase complex2.41E-05
5GO:0005774: vacuolar membrane4.62E-05
6GO:0009507: chloroplast5.27E-05
7GO:0031314: extrinsic component of mitochondrial inner membrane6.16E-05
8GO:0030660: Golgi-associated vesicle membrane2.21E-04
9GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane2.21E-04
10GO:0005746: mitochondrial respiratory chain2.84E-04
11GO:0030173: integral component of Golgi membrane4.20E-04
12GO:0005829: cytosol5.65E-04
13GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane5.68E-04
14GO:0000326: protein storage vacuole6.45E-04
15GO:0019773: proteasome core complex, alpha-subunit complex6.45E-04
16GO:0031090: organelle membrane7.25E-04
17GO:0005773: vacuole7.29E-04
18GO:0005765: lysosomal membrane9.78E-04
19GO:0030176: integral component of endoplasmic reticulum membrane1.35E-03
20GO:0005839: proteasome core complex1.76E-03
21GO:0031969: chloroplast membrane2.32E-03
22GO:0009505: plant-type cell wall2.49E-03
23GO:0000502: proteasome complex7.47E-03
24GO:0005623: cell1.14E-02
25GO:0005739: mitochondrion1.24E-02
26GO:0005886: plasma membrane1.27E-02
27GO:0009941: chloroplast envelope1.33E-02
28GO:0009536: plastid1.50E-02
29GO:0005789: endoplasmic reticulum membrane1.87E-02
30GO:0009570: chloroplast stroma2.03E-02
31GO:0005743: mitochondrial inner membrane2.80E-02
32GO:0043231: intracellular membrane-bounded organelle3.16E-02
33GO:0016020: membrane3.93E-02
34GO:0022626: cytosolic ribosome4.30E-02
35GO:0048046: apoplast4.44E-02
36GO:0005618: cell wall4.83E-02
37GO:0009506: plasmodesma4.84E-02
38GO:0005777: peroxisome4.89E-02
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Gene type



Gene DE type