Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G04060

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010111: glyoxysome organization0.00E+00
2GO:0019395: fatty acid oxidation2.19E-05
3GO:1903830: magnesium ion transmembrane transport8.58E-05
4GO:0016094: polyprenol biosynthetic process1.12E-04
5GO:0006333: chromatin assembly or disassembly2.04E-04
6GO:0015693: magnesium ion transport2.04E-04
7GO:0009695: jasmonic acid biosynthetic process7.09E-04
8GO:0031408: oxylipin biosynthetic process7.53E-04
9GO:0009789: positive regulation of abscisic acid-activated signaling pathway9.38E-04
10GO:0006635: fatty acid beta-oxidation1.18E-03
11GO:0010583: response to cyclopentenone1.23E-03
12GO:0006464: cellular protein modification process1.34E-03
13GO:0006914: autophagy1.34E-03
14GO:0030001: metal ion transport2.29E-03
15GO:0006486: protein glycosylation3.04E-03
16GO:0006396: RNA processing3.94E-03
17GO:0006470: protein dephosphorylation6.15E-03
18GO:0006970: response to osmotic stress8.00E-03
19GO:0045892: negative regulation of transcription, DNA-templated1.01E-02
20GO:0009734: auxin-activated signaling pathway1.48E-02
21GO:0009738: abscisic acid-activated signaling pathway1.70E-02
22GO:0009611: response to wounding1.77E-02
23GO:0006979: response to oxidative stress2.90E-02
24GO:0009733: response to auxin3.13E-02
25GO:0015031: protein transport3.42E-02
RankGO TermAdjusted P value
1GO:0003988: acetyl-CoA C-acyltransferase activity2.19E-05
2GO:0030527: structural constituent of chromatin6.14E-05
3GO:0004301: epoxide hydrolase activity8.58E-05
4GO:0002094: polyprenyltransferase activity1.12E-04
5GO:0008113: peptide-methionine (S)-S-oxide reductase activity1.71E-04
6GO:0004869: cysteine-type endopeptidase inhibitor activity2.37E-04
7GO:0015095: magnesium ion transmembrane transporter activity4.98E-04
8GO:0046873: metal ion transmembrane transporter activity1.03E-03
9GO:0008234: cysteine-type peptidase activity3.26E-03
10GO:0003682: chromatin binding7.90E-03
11GO:0004722: protein serine/threonine phosphatase activity1.07E-02
12GO:0003735: structural constituent of ribosome4.71E-02
13GO:0016787: hydrolase activity4.96E-02
RankGO TermAdjusted P value
1GO:0000323: lytic vacuole6.14E-05
2GO:0009514: glyoxysome2.71E-04
3GO:0016602: CCAAT-binding factor complex4.98E-04
4GO:0000785: chromatin1.23E-03
5GO:0030529: intracellular ribonucleoprotein complex1.50E-03
6GO:0005615: extracellular space6.06E-03
7GO:0043231: intracellular membrane-bounded organelle1.24E-02
8GO:0005829: cytosol1.63E-02
9GO:0005777: peroxisome1.92E-02
10GO:0005840: ribosome2.98E-02
11GO:0005789: endoplasmic reticulum membrane3.90E-02
12GO:0005730: nucleolus4.19E-02
13GO:0005634: nucleus4.52E-02
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Gene type



Gene DE type