co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G03950

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006182: cGMP biosynthetic process	0.00E+00
2	GO:0043462: regulation of ATPase activity	0.00E+00
3	GO:0044794: positive regulation by host of viral process	0.00E+00
4	GO:0010726: positive regulation of hydrogen peroxide metabolic process	3.00E-05
5	GO:0010421: hydrogen peroxide-mediated programmed cell death	3.00E-05
6	GO:0006556: S-adenosylmethionine biosynthetic process	1.32E-04
7	GO:0048544: recognition of pollen	1.41E-04
8	GO:0001676: long-chain fatty acid metabolic process	1.97E-04
9	GO:0045017: glycerolipid biosynthetic process	1.97E-04
10	GO:1901000: regulation of response to salt stress	1.97E-04
11	GO:0046283: anthocyanin-containing compound metabolic process	3.42E-04
12	GO:0010225: response to UV-C	3.42E-04
13	GO:0010942: positive regulation of cell death	4.20E-04
14	GO:0006979: response to oxidative stress	4.28E-04
15	GO:0009094: L-phenylalanine biosynthetic process	5.02E-04
16	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	5.88E-04
17	GO:0006367: transcription initiation from RNA polymerase II promoter	7.68E-04
18	GO:0046686: response to cadmium ion	8.29E-04
19	GO:0007338: single fertilization	8.63E-04
20	GO:0006098: pentose-phosphate shunt	8.63E-04
21	GO:0008202: steroid metabolic process	9.61E-04
22	GO:0030042: actin filament depolymerization	9.61E-04
23	GO:0006896: Golgi to vacuole transport	1.06E-03
24	GO:0000266: mitochondrial fission	1.27E-03
25	GO:0012501: programmed cell death	1.27E-03
26	GO:0006094: gluconeogenesis	1.38E-03
27	GO:0042343: indole glucosinolate metabolic process	1.61E-03
28	GO:0031408: oxylipin biosynthetic process	2.11E-03
29	GO:0098542: defense response to other organism	2.11E-03
30	GO:0009814: defense response, incompatible interaction	2.25E-03
31	GO:0006730: one-carbon metabolic process	2.25E-03
32	GO:0006468: protein phosphorylation	2.31E-03
33	GO:0009693: ethylene biosynthetic process	2.38E-03
34	GO:0044550: secondary metabolite biosynthetic process	3.30E-03
35	GO:0002229: defense response to oomycetes	3.40E-03
36	GO:0016032: viral process	3.55E-03
37	GO:1901657: glycosyl compound metabolic process	3.71E-03
38	GO:0071281: cellular response to iron ion	3.71E-03
39	GO:0009567: double fertilization forming a zygote and endosperm	3.87E-03
40	GO:0016579: protein deubiquitination	4.20E-03
41	GO:0009911: positive regulation of flower development	4.36E-03
42	GO:0048573: photoperiodism, flowering	4.88E-03
43	GO:0006888: ER to Golgi vesicle-mediated transport	4.88E-03
44	GO:0009817: defense response to fungus, incompatible interaction	5.23E-03
45	GO:0006499: N-terminal protein myristoylation	5.60E-03
46	GO:0006952: defense response	5.62E-03
47	GO:0010043: response to zinc ion	5.78E-03
48	GO:0006631: fatty acid metabolic process	6.94E-03
49	GO:0042542: response to hydrogen peroxide	7.14E-03
50	GO:0008283: cell proliferation	7.34E-03
51	GO:0051707: response to other organism	7.34E-03
52	GO:0006855: drug transmembrane transport	8.17E-03
53	GO:0051603: proteolysis involved in cellular protein catabolic process	9.25E-03
54	GO:0006096: glycolytic process	1.02E-02
55	GO:0006457: protein folding	1.02E-02
56	GO:0048367: shoot system development	1.04E-02
57	GO:0009626: plant-type hypersensitive response	1.06E-02
58	GO:0006511: ubiquitin-dependent protein catabolic process	1.08E-02
59	GO:0009620: response to fungus	1.09E-02
60	GO:0009651: response to salt stress	1.23E-02
61	GO:0006413: translational initiation	1.62E-02
62	GO:0010150: leaf senescence	1.70E-02
63	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.85E-02
64	GO:0007166: cell surface receptor signaling pathway	1.87E-02
65	GO:0009617: response to bacterium	1.93E-02
66	GO:0048366: leaf development	2.61E-02
67	GO:0080167: response to karrikin	2.71E-02
68	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.78E-02
69	GO:0006886: intracellular protein transport	3.15E-02
70	GO:0007275: multicellular organism development	3.17E-02
71	GO:0006869: lipid transport	3.29E-02
72	GO:0009751: response to salicylic acid	3.54E-02
73	GO:0009408: response to heat	3.58E-02
74	GO:0048364: root development	3.69E-02
75	GO:0008152: metabolic process	3.83E-02
76	GO:0016310: phosphorylation	3.94E-02

Rank	GO Term	Adjusted P value
1	GO:0004733: pyridoxamine-phosphate oxidase activity	3.00E-05
2	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	7.58E-05
3	GO:0032934: sterol binding	7.58E-05
4	GO:0004383: guanylate cyclase activity	1.32E-04
5	GO:0004478: methionine adenosyltransferase activity	1.32E-04
6	GO:0047769: arogenate dehydratase activity	2.67E-04
7	GO:0004664: prephenate dehydratase activity	2.67E-04
8	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	3.42E-04
9	GO:0005524: ATP binding	3.50E-04
10	GO:0004332: fructose-bisphosphate aldolase activity	4.20E-04
11	GO:0004144: diacylglycerol O-acyltransferase activity	5.02E-04
12	GO:0004143: diacylglycerol kinase activity	5.88E-04
13	GO:0003951: NAD+ kinase activity	7.68E-04
14	GO:0008142: oxysterol binding	7.68E-04
15	GO:0071949: FAD binding	8.63E-04
16	GO:0003678: DNA helicase activity	8.63E-04
17	GO:0004674: protein serine/threonine kinase activity	1.05E-03
18	GO:0031072: heat shock protein binding	1.38E-03
19	GO:0030246: carbohydrate binding	1.59E-03
20	GO:0043424: protein histidine kinase binding	1.98E-03
21	GO:0004298: threonine-type endopeptidase activity	2.11E-03
22	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	2.11E-03
23	GO:0010181: FMN binding	3.09E-03
24	GO:0004843: thiol-dependent ubiquitin-specific protease activity	3.40E-03
25	GO:0004197: cysteine-type endopeptidase activity	3.55E-03
26	GO:0016597: amino acid binding	4.20E-03
27	GO:0051213: dioxygenase activity	4.36E-03
28	GO:0102483: scopolin beta-glucosidase activity	4.88E-03
29	GO:0030247: polysaccharide binding	4.88E-03
30	GO:0015238: drug transmembrane transporter activity	5.41E-03
31	GO:0008422: beta-glucosidase activity	6.54E-03
32	GO:0003779: actin binding	1.13E-02
33	GO:0051082: unfolded protein binding	1.16E-02
34	GO:0015297: antiporter activity	1.65E-02
35	GO:0008017: microtubule binding	1.76E-02
36	GO:0008194: UDP-glycosyltransferase activity	1.85E-02
37	GO:0003743: translation initiation factor activity	1.90E-02
38	GO:0004601: peroxidase activity	2.32E-02
39	GO:0043531: ADP binding	2.48E-02
40	GO:0020037: heme binding	2.54E-02
41	GO:0008233: peptidase activity	2.68E-02
42	GO:0004497: monooxygenase activity	2.71E-02
43	GO:0016301: kinase activity	2.96E-02
44	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.25E-02
45	GO:0003924: GTPase activity	3.58E-02
46	GO:0008289: lipid binding	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0030127: COPII vesicle coat	4.20E-04
3	GO:0005886: plasma membrane	8.58E-04
4	GO:0009506: plasmodesma	1.58E-03
5	GO:0005839: proteasome core complex	2.11E-03
6	GO:0015629: actin cytoskeleton	2.38E-03
7	GO:0030136: clathrin-coated vesicle	2.66E-03
8	GO:0005829: cytosol	3.68E-03
9	GO:0005788: endoplasmic reticulum lumen	4.53E-03
10	GO:0031966: mitochondrial membrane	8.60E-03
11	GO:0000502: proteasome complex	9.03E-03
12	GO:0010287: plastoglobule	1.31E-02
13	GO:0009524: phragmoplast	1.41E-02
14	GO:0005618: cell wall	1.52E-02
15	GO:0005874: microtubule	2.64E-02
16	GO:0005730: nucleolus	2.72E-02
17	GO:0005576: extracellular region	3.09E-02
18	GO:0005783: endoplasmic reticulum	3.10E-02