GO Enrichment Analysis of Co-expressed Genes with
AT3G02720
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 2 | GO:0097275: cellular ammonia homeostasis | 0.00E+00 |
| 3 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 4 | GO:0051924: regulation of calcium ion transport | 0.00E+00 |
| 5 | GO:0034757: negative regulation of iron ion transport | 3.64E-05 |
| 6 | GO:0051775: response to redox state | 3.64E-05 |
| 7 | GO:0018107: peptidyl-threonine phosphorylation | 4.65E-05 |
| 8 | GO:0010271: regulation of chlorophyll catabolic process | 9.09E-05 |
| 9 | GO:0018105: peptidyl-serine phosphorylation | 9.12E-05 |
| 10 | GO:0031022: nuclear migration along microfilament | 1.58E-04 |
| 11 | GO:0080117: secondary growth | 1.58E-04 |
| 12 | GO:2001295: malonyl-CoA biosynthetic process | 1.58E-04 |
| 13 | GO:0051639: actin filament network formation | 2.33E-04 |
| 14 | GO:0006107: oxaloacetate metabolic process | 2.33E-04 |
| 15 | GO:0016126: sterol biosynthetic process | 3.08E-04 |
| 16 | GO:0051764: actin crosslink formation | 3.14E-04 |
| 17 | GO:0006734: NADH metabolic process | 3.14E-04 |
| 18 | GO:0009904: chloroplast accumulation movement | 4.01E-04 |
| 19 | GO:0009631: cold acclimation | 4.64E-04 |
| 20 | GO:0048831: regulation of shoot system development | 4.92E-04 |
| 21 | GO:0009643: photosynthetic acclimation | 4.92E-04 |
| 22 | GO:0048509: regulation of meristem development | 5.88E-04 |
| 23 | GO:0009903: chloroplast avoidance movement | 5.88E-04 |
| 24 | GO:0009854: oxidative photosynthetic carbon pathway | 5.88E-04 |
| 25 | GO:0030497: fatty acid elongation | 6.87E-04 |
| 26 | GO:0071482: cellular response to light stimulus | 8.97E-04 |
| 27 | GO:0009821: alkaloid biosynthetic process | 1.01E-03 |
| 28 | GO:0034765: regulation of ion transmembrane transport | 1.01E-03 |
| 29 | GO:0000373: Group II intron splicing | 1.01E-03 |
| 30 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.12E-03 |
| 31 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.24E-03 |
| 32 | GO:0010072: primary shoot apical meristem specification | 1.36E-03 |
| 33 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.36E-03 |
| 34 | GO:0005983: starch catabolic process | 1.49E-03 |
| 35 | GO:0035556: intracellular signal transduction | 1.59E-03 |
| 36 | GO:0006108: malate metabolic process | 1.62E-03 |
| 37 | GO:0009933: meristem structural organization | 1.76E-03 |
| 38 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.04E-03 |
| 39 | GO:0080147: root hair cell development | 2.18E-03 |
| 40 | GO:0051017: actin filament bundle assembly | 2.18E-03 |
| 41 | GO:0061077: chaperone-mediated protein folding | 2.48E-03 |
| 42 | GO:0010017: red or far-red light signaling pathway | 2.64E-03 |
| 43 | GO:0080092: regulation of pollen tube growth | 2.64E-03 |
| 44 | GO:0071215: cellular response to abscisic acid stimulus | 2.80E-03 |
| 45 | GO:0070417: cellular response to cold | 3.13E-03 |
| 46 | GO:0042631: cellular response to water deprivation | 3.30E-03 |
| 47 | GO:0042391: regulation of membrane potential | 3.30E-03 |
| 48 | GO:0010087: phloem or xylem histogenesis | 3.30E-03 |
| 49 | GO:0007018: microtubule-based movement | 3.64E-03 |
| 50 | GO:0019252: starch biosynthetic process | 3.82E-03 |
| 51 | GO:0016032: viral process | 4.19E-03 |
| 52 | GO:0055114: oxidation-reduction process | 4.51E-03 |
| 53 | GO:0071805: potassium ion transmembrane transport | 4.75E-03 |
| 54 | GO:0010029: regulation of seed germination | 5.35E-03 |
| 55 | GO:0015995: chlorophyll biosynthetic process | 5.76E-03 |
| 56 | GO:0005975: carbohydrate metabolic process | 6.15E-03 |
| 57 | GO:0000160: phosphorelay signal transduction system | 6.39E-03 |
| 58 | GO:0009853: photorespiration | 7.28E-03 |
| 59 | GO:0006099: tricarboxylic acid cycle | 7.51E-03 |
| 60 | GO:0009636: response to toxic substance | 9.42E-03 |
| 61 | GO:0009737: response to abscisic acid | 9.46E-03 |
| 62 | GO:0009793: embryo development ending in seed dormancy | 1.05E-02 |
| 63 | GO:0009585: red, far-red light phototransduction | 1.07E-02 |
| 64 | GO:0006813: potassium ion transport | 1.07E-02 |
| 65 | GO:0009736: cytokinin-activated signaling pathway | 1.07E-02 |
| 66 | GO:0009909: regulation of flower development | 1.15E-02 |
| 67 | GO:0048367: shoot system development | 1.23E-02 |
| 68 | GO:0055085: transmembrane transport | 1.28E-02 |
| 69 | GO:0009058: biosynthetic process | 1.67E-02 |
| 70 | GO:0006633: fatty acid biosynthetic process | 1.89E-02 |
| 71 | GO:0006413: translational initiation | 1.92E-02 |
| 72 | GO:0007623: circadian rhythm | 2.02E-02 |
| 73 | GO:0007166: cell surface receptor signaling pathway | 2.23E-02 |
| 74 | GO:0006970: response to osmotic stress | 2.91E-02 |
| 75 | GO:0046777: protein autophosphorylation | 3.38E-02 |
| 76 | GO:0045454: cell redox homeostasis | 3.66E-02 |
| 77 | GO:0006397: mRNA processing | 4.38E-02 |
| 78 | GO:0048364: root development | 4.38E-02 |
| 79 | GO:0009753: response to jasmonic acid | 4.46E-02 |
| 80 | GO:0006468: protein phosphorylation | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 2 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 3 | GO:0051060: pullulanase activity | 0.00E+00 |
| 4 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 5 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 6 | GO:0004506: squalene monooxygenase activity | 1.60E-06 |
| 7 | GO:0008746: NAD(P)+ transhydrogenase activity | 3.64E-05 |
| 8 | GO:0004312: fatty acid synthase activity | 9.09E-05 |
| 9 | GO:0009884: cytokinin receptor activity | 9.09E-05 |
| 10 | GO:0019200: carbohydrate kinase activity | 9.09E-05 |
| 11 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 1.58E-04 |
| 12 | GO:0008253: 5'-nucleotidase activity | 1.58E-04 |
| 13 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.58E-04 |
| 14 | GO:0004075: biotin carboxylase activity | 1.58E-04 |
| 15 | GO:0005034: osmosensor activity | 1.58E-04 |
| 16 | GO:0022890: inorganic cation transmembrane transporter activity | 2.33E-04 |
| 17 | GO:0003989: acetyl-CoA carboxylase activity | 4.01E-04 |
| 18 | GO:0050660: flavin adenine dinucleotide binding | 4.14E-04 |
| 19 | GO:0004556: alpha-amylase activity | 4.92E-04 |
| 20 | GO:0016615: malate dehydrogenase activity | 4.92E-04 |
| 21 | GO:0005242: inward rectifier potassium channel activity | 5.88E-04 |
| 22 | GO:0030060: L-malate dehydrogenase activity | 5.88E-04 |
| 23 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 5.88E-04 |
| 24 | GO:0019900: kinase binding | 5.88E-04 |
| 25 | GO:0005524: ATP binding | 8.00E-04 |
| 26 | GO:0016844: strictosidine synthase activity | 1.12E-03 |
| 27 | GO:0004673: protein histidine kinase activity | 1.24E-03 |
| 28 | GO:0044183: protein binding involved in protein folding | 1.36E-03 |
| 29 | GO:0015386: potassium:proton antiporter activity | 1.36E-03 |
| 30 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.36E-03 |
| 31 | GO:0000155: phosphorelay sensor kinase activity | 1.62E-03 |
| 32 | GO:0008266: poly(U) RNA binding | 1.76E-03 |
| 33 | GO:0043424: protein histidine kinase binding | 2.33E-03 |
| 34 | GO:0015079: potassium ion transmembrane transporter activity | 2.33E-03 |
| 35 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.58E-03 |
| 36 | GO:0042802: identical protein binding | 2.58E-03 |
| 37 | GO:0005249: voltage-gated potassium channel activity | 3.30E-03 |
| 38 | GO:0030551: cyclic nucleotide binding | 3.30E-03 |
| 39 | GO:0015299: solute:proton antiporter activity | 3.64E-03 |
| 40 | GO:0051015: actin filament binding | 4.37E-03 |
| 41 | GO:0008483: transaminase activity | 4.75E-03 |
| 42 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 5.55E-03 |
| 43 | GO:0004683: calmodulin-dependent protein kinase activity | 5.76E-03 |
| 44 | GO:0050897: cobalt ion binding | 6.83E-03 |
| 45 | GO:0003746: translation elongation factor activity | 7.28E-03 |
| 46 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.68E-03 |
| 47 | GO:0051287: NAD binding | 9.93E-03 |
| 48 | GO:0003777: microtubule motor activity | 1.15E-02 |
| 49 | GO:0003779: actin binding | 1.34E-02 |
| 50 | GO:0016301: kinase activity | 1.38E-02 |
| 51 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.64E-02 |
| 52 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.92E-02 |
| 53 | GO:0008017: microtubule binding | 2.09E-02 |
| 54 | GO:0003743: translation initiation factor activity | 2.26E-02 |
| 55 | GO:0016491: oxidoreductase activity | 2.70E-02 |
| 56 | GO:0004674: protein serine/threonine kinase activity | 2.73E-02 |
| 57 | GO:0016788: hydrolase activity, acting on ester bonds | 2.80E-02 |
| 58 | GO:0004672: protein kinase activity | 3.02E-02 |
| 59 | GO:0004497: monooxygenase activity | 3.22E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 5.82E-08 |
| 2 | GO:0009570: chloroplast stroma | 2.08E-05 |
| 3 | GO:0032432: actin filament bundle | 2.33E-04 |
| 4 | GO:0048046: apoplast | 9.59E-04 |
| 5 | GO:0005884: actin filament | 1.36E-03 |
| 6 | GO:0005623: cell | 1.53E-03 |
| 7 | GO:0005871: kinesin complex | 3.13E-03 |
| 8 | GO:0031969: chloroplast membrane | 3.87E-03 |
| 9 | GO:0030529: intracellular ribonucleoprotein complex | 5.15E-03 |
| 10 | GO:0005886: plasma membrane | 5.29E-03 |
| 11 | GO:0031977: thylakoid lumen | 8.21E-03 |
| 12 | GO:0005747: mitochondrial respiratory chain complex I | 1.23E-02 |
| 13 | GO:0005622: intracellular | 1.80E-02 |
| 14 | GO:0005759: mitochondrial matrix | 1.89E-02 |
| 15 | GO:0009705: plant-type vacuole membrane | 2.02E-02 |
| 16 | GO:0009941: chloroplast envelope | 2.57E-02 |
| 17 | GO:0005874: microtubule | 3.14E-02 |
| 18 | GO:0005789: endoplasmic reticulum membrane | 3.14E-02 |
| 19 | GO:0005783: endoplasmic reticulum | 4.20E-02 |
| 20 | GO:0009535: chloroplast thylakoid membrane | 4.58E-02 |