Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G01560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0036258: multivesicular body assembly0.00E+00
2GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
3GO:0070676: intralumenal vesicle formation5.54E-07
4GO:0010072: primary shoot apical meristem specification2.37E-05
5GO:0000303: response to superoxide2.88E-05
6GO:0071806: protein transmembrane transport2.88E-05
7GO:0046167: glycerol-3-phosphate biosynthetic process2.88E-05
8GO:0006641: triglyceride metabolic process7.28E-05
9GO:0046740: transport of virus in host, cell to cell7.28E-05
10GO:0010498: proteasomal protein catabolic process1.27E-04
11GO:0006556: S-adenosylmethionine biosynthetic process1.27E-04
12GO:0019563: glycerol catabolic process1.27E-04
13GO:0006072: glycerol-3-phosphate metabolic process1.89E-04
14GO:0006809: nitric oxide biosynthetic process1.89E-04
15GO:0051259: protein oligomerization1.89E-04
16GO:0010071: root meristem specification1.89E-04
17GO:0010188: response to microbial phytotoxin2.57E-04
18GO:0009867: jasmonic acid mediated signaling pathway3.80E-04
19GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly4.06E-04
20GO:0000911: cytokinesis by cell plate formation4.86E-04
21GO:0015937: coenzyme A biosynthetic process5.68E-04
22GO:0010078: maintenance of root meristem identity6.55E-04
23GO:0010492: maintenance of shoot apical meristem identity6.55E-04
24GO:0048268: clathrin coat assembly9.29E-04
25GO:0012501: programmed cell death1.23E-03
26GO:0010102: lateral root morphogenesis1.34E-03
27GO:0006626: protein targeting to mitochondrion1.34E-03
28GO:0055046: microgametogenesis1.34E-03
29GO:0002237: response to molecule of bacterial origin1.45E-03
30GO:0007034: vacuolar transport1.45E-03
31GO:0007031: peroxisome organization1.56E-03
32GO:0009825: multidimensional cell growth1.56E-03
33GO:0010053: root epidermal cell differentiation1.56E-03
34GO:0006470: protein dephosphorylation1.74E-03
35GO:0030150: protein import into mitochondrial matrix1.79E-03
36GO:2000377: regulation of reactive oxygen species metabolic process1.79E-03
37GO:0010017: red or far-red light signaling pathway2.17E-03
38GO:0006730: one-carbon metabolic process2.17E-03
39GO:0030433: ubiquitin-dependent ERAD pathway2.17E-03
40GO:0031348: negative regulation of defense response2.17E-03
41GO:0009693: ethylene biosynthetic process2.30E-03
42GO:0009561: megagametogenesis2.43E-03
43GO:0080022: primary root development2.70E-03
44GO:0010051: xylem and phloem pattern formation2.70E-03
45GO:0055072: iron ion homeostasis3.13E-03
46GO:0010193: response to ozone3.28E-03
47GO:0015031: protein transport3.37E-03
48GO:0010583: response to cyclopentenone3.43E-03
49GO:0016032: viral process3.43E-03
50GO:0045892: negative regulation of transcription, DNA-templated3.50E-03
51GO:0071281: cellular response to iron ion3.58E-03
52GO:0010286: heat acclimation3.89E-03
53GO:0009816: defense response to bacterium, incompatible interaction4.37E-03
54GO:0009873: ethylene-activated signaling pathway5.47E-03
55GO:0006897: endocytosis6.69E-03
56GO:0000209: protein polyubiquitination7.28E-03
57GO:0035556: intracellular signal transduction7.93E-03
58GO:0031347: regulation of defense response8.09E-03
59GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process8.09E-03
60GO:0051603: proteolysis involved in cellular protein catabolic process8.92E-03
61GO:0006417: regulation of translation9.36E-03
62GO:0016569: covalent chromatin modification1.07E-02
63GO:0009553: embryo sac development1.09E-02
64GO:0006396: RNA processing1.14E-02
65GO:0051726: regulation of cell cycle1.16E-02
66GO:0009790: embryo development1.46E-02
67GO:0006633: fatty acid biosynthetic process1.54E-02
68GO:0006413: translational initiation1.56E-02
69GO:0016036: cellular response to phosphate starvation1.56E-02
70GO:0040008: regulation of growth1.59E-02
71GO:0009733: response to auxin1.71E-02
72GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.78E-02
73GO:0010468: regulation of gene expression1.86E-02
74GO:0009617: response to bacterium1.86E-02
75GO:0005975: carbohydrate metabolic process2.32E-02
76GO:0006970: response to osmotic stress2.36E-02
77GO:0006351: transcription, DNA-templated2.37E-02
78GO:0009723: response to ethylene2.48E-02
79GO:0080167: response to karrikin2.61E-02
80GO:0010200: response to chitin2.67E-02
81GO:0016192: vesicle-mediated transport2.71E-02
82GO:0045454: cell redox homeostasis2.97E-02
83GO:0006397: mRNA processing3.55E-02
84GO:0008152: metabolic process3.70E-02
85GO:0016310: phosphorylation3.74E-02
86GO:0009734: auxin-activated signaling pathway4.40E-02
87GO:0009908: flower development4.82E-02
RankGO TermAdjusted P value
1GO:0033550: MAP kinase tyrosine phosphatase activity0.00E+00
2GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives0.00E+00
3GO:0004370: glycerol kinase activity0.00E+00
4GO:0005515: protein binding1.30E-05
5GO:0004713: protein tyrosine kinase activity1.97E-05
6GO:0030544: Hsp70 protein binding2.88E-05
7GO:0004750: ribulose-phosphate 3-epimerase activity7.28E-05
8GO:0019200: carbohydrate kinase activity7.28E-05
9GO:0004594: pantothenate kinase activity7.28E-05
10GO:0004478: methionine adenosyltransferase activity1.27E-04
11GO:0036402: proteasome-activating ATPase activity4.06E-04
12GO:0004712: protein serine/threonine/tyrosine kinase activity4.15E-04
13GO:0003950: NAD+ ADP-ribosyltransferase activity4.86E-04
14GO:0003730: mRNA 3'-UTR binding4.86E-04
15GO:0035064: methylated histone binding6.55E-04
16GO:0005545: 1-phosphatidylinositol binding1.03E-03
17GO:0015266: protein channel activity1.34E-03
18GO:0017025: TBP-class protein binding1.56E-03
19GO:0004725: protein tyrosine phosphatase activity1.67E-03
20GO:0043130: ubiquitin binding1.79E-03
21GO:0043424: protein histidine kinase binding1.92E-03
22GO:0030276: clathrin binding2.84E-03
23GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.58E-03
24GO:0042803: protein homodimerization activity3.61E-03
25GO:0004722: protein serine/threonine phosphatase activity3.78E-03
26GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity5.05E-03
27GO:0035091: phosphatidylinositol binding7.48E-03
28GO:0008194: UDP-glycosyltransferase activity1.78E-02
29GO:0003743: translation initiation factor activity1.83E-02
30GO:0046982: protein heterodimerization activity2.21E-02
31GO:0003729: mRNA binding2.27E-02
32GO:0061630: ubiquitin protein ligase activity2.71E-02
33GO:0004871: signal transducer activity3.07E-02
34GO:0003723: RNA binding3.34E-02
35GO:0016887: ATPase activity4.71E-02
36GO:0005524: ATP binding4.94E-02
RankGO TermAdjusted P value
1GO:0030136: clathrin-coated vesicle1.04E-04
2GO:0000813: ESCRT I complex3.30E-04
3GO:0005771: multivesicular body4.06E-04
4GO:0016363: nuclear matrix4.86E-04
5GO:0031597: cytosolic proteasome complex4.86E-04
6GO:0000815: ESCRT III complex4.86E-04
7GO:0031595: nuclear proteasome complex5.68E-04
8GO:0031305: integral component of mitochondrial inner membrane6.55E-04
9GO:0008540: proteasome regulatory particle, base subcomplex9.29E-04
10GO:0005905: clathrin-coated pit2.04E-03
11GO:0005744: mitochondrial inner membrane presequence translocase complex2.43E-03
12GO:0005770: late endosome2.84E-03
13GO:0005778: peroxisomal membrane3.89E-03
14GO:0030529: intracellular ribonucleoprotein complex4.21E-03
15GO:0005634: nucleus6.29E-03
16GO:0031902: late endosome membrane6.69E-03
17GO:0000502: proteasome complex8.71E-03
18GO:0005829: cytosol9.40E-03
19GO:0010008: endosome membrane1.00E-02
20GO:0005886: plasma membrane2.41E-02
21GO:0005743: mitochondrial inner membrane3.27E-02
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Gene type



Gene DE type