GO Enrichment Analysis of Co-expressed Genes with
AT3G01550
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 2 | GO:0009249: protein lipoylation | 0.00E+00 |
| 3 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 4 | GO:0009106: lipoate metabolic process | 0.00E+00 |
| 5 | GO:0015979: photosynthesis | 6.03E-15 |
| 6 | GO:0015995: chlorophyll biosynthetic process | 5.77E-09 |
| 7 | GO:0009735: response to cytokinin | 1.25E-06 |
| 8 | GO:0006412: translation | 1.48E-06 |
| 9 | GO:0032544: plastid translation | 1.86E-06 |
| 10 | GO:0090391: granum assembly | 3.82E-06 |
| 11 | GO:0009658: chloroplast organization | 6.40E-06 |
| 12 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.44E-04 |
| 13 | GO:0010442: guard cell morphogenesis | 1.44E-04 |
| 14 | GO:1904964: positive regulation of phytol biosynthetic process | 1.44E-04 |
| 15 | GO:0006783: heme biosynthetic process | 1.53E-04 |
| 16 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.18E-04 |
| 17 | GO:0009773: photosynthetic electron transport in photosystem I | 2.54E-04 |
| 18 | GO:0080183: response to photooxidative stress | 3.29E-04 |
| 19 | GO:0052541: plant-type cell wall cellulose metabolic process | 3.29E-04 |
| 20 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.29E-04 |
| 21 | GO:0006636: unsaturated fatty acid biosynthetic process | 4.72E-04 |
| 22 | GO:0071492: cellular response to UV-A | 5.40E-04 |
| 23 | GO:0006760: folic acid-containing compound metabolic process | 5.40E-04 |
| 24 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 7.73E-04 |
| 25 | GO:0006241: CTP biosynthetic process | 7.73E-04 |
| 26 | GO:0006165: nucleoside diphosphate phosphorylation | 7.73E-04 |
| 27 | GO:0006228: UTP biosynthetic process | 7.73E-04 |
| 28 | GO:2000122: negative regulation of stomatal complex development | 1.02E-03 |
| 29 | GO:0046656: folic acid biosynthetic process | 1.02E-03 |
| 30 | GO:0006021: inositol biosynthetic process | 1.02E-03 |
| 31 | GO:0010037: response to carbon dioxide | 1.02E-03 |
| 32 | GO:0015976: carbon utilization | 1.02E-03 |
| 33 | GO:0071486: cellular response to high light intensity | 1.02E-03 |
| 34 | GO:0006183: GTP biosynthetic process | 1.02E-03 |
| 35 | GO:0031365: N-terminal protein amino acid modification | 1.29E-03 |
| 36 | GO:0009107: lipoate biosynthetic process | 1.29E-03 |
| 37 | GO:0016123: xanthophyll biosynthetic process | 1.29E-03 |
| 38 | GO:0034052: positive regulation of plant-type hypersensitive response | 1.29E-03 |
| 39 | GO:0046855: inositol phosphate dephosphorylation | 1.59E-03 |
| 40 | GO:0010027: thylakoid membrane organization | 1.78E-03 |
| 41 | GO:0046654: tetrahydrofolate biosynthetic process | 1.91E-03 |
| 42 | GO:0009854: oxidative photosynthetic carbon pathway | 1.91E-03 |
| 43 | GO:0009955: adaxial/abaxial pattern specification | 1.91E-03 |
| 44 | GO:1901259: chloroplast rRNA processing | 1.91E-03 |
| 45 | GO:0009627: systemic acquired resistance | 1.98E-03 |
| 46 | GO:0009610: response to symbiotic fungus | 2.24E-03 |
| 47 | GO:0009772: photosynthetic electron transport in photosystem II | 2.24E-03 |
| 48 | GO:0010196: nonphotochemical quenching | 2.24E-03 |
| 49 | GO:0050829: defense response to Gram-negative bacterium | 2.24E-03 |
| 50 | GO:0055114: oxidation-reduction process | 2.32E-03 |
| 51 | GO:0043068: positive regulation of programmed cell death | 2.60E-03 |
| 52 | GO:0006605: protein targeting | 2.60E-03 |
| 53 | GO:0048564: photosystem I assembly | 2.60E-03 |
| 54 | GO:0042255: ribosome assembly | 2.60E-03 |
| 55 | GO:0009932: cell tip growth | 2.96E-03 |
| 56 | GO:0009657: plastid organization | 2.96E-03 |
| 57 | GO:0000373: Group II intron splicing | 3.35E-03 |
| 58 | GO:0009245: lipid A biosynthetic process | 3.35E-03 |
| 59 | GO:0042254: ribosome biogenesis | 3.47E-03 |
| 60 | GO:0010205: photoinhibition | 3.76E-03 |
| 61 | GO:0019538: protein metabolic process | 4.18E-03 |
| 62 | GO:0080167: response to karrikin | 4.45E-03 |
| 63 | GO:0043085: positive regulation of catalytic activity | 4.61E-03 |
| 64 | GO:0048765: root hair cell differentiation | 4.61E-03 |
| 65 | GO:0006790: sulfur compound metabolic process | 5.06E-03 |
| 66 | GO:0010628: positive regulation of gene expression | 5.52E-03 |
| 67 | GO:0009725: response to hormone | 5.52E-03 |
| 68 | GO:0019853: L-ascorbic acid biosynthetic process | 6.50E-03 |
| 69 | GO:0046854: phosphatidylinositol phosphorylation | 6.50E-03 |
| 70 | GO:0010053: root epidermal cell differentiation | 6.50E-03 |
| 71 | GO:0006071: glycerol metabolic process | 7.00E-03 |
| 72 | GO:0019762: glucosinolate catabolic process | 7.00E-03 |
| 73 | GO:0006487: protein N-linked glycosylation | 7.52E-03 |
| 74 | GO:0000027: ribosomal large subunit assembly | 7.52E-03 |
| 75 | GO:0045333: cellular respiration | 7.52E-03 |
| 76 | GO:0010026: trichome differentiation | 8.06E-03 |
| 77 | GO:0031408: oxylipin biosynthetic process | 8.61E-03 |
| 78 | GO:0061077: chaperone-mediated protein folding | 8.61E-03 |
| 79 | GO:0009814: defense response, incompatible interaction | 9.17E-03 |
| 80 | GO:0009411: response to UV | 9.75E-03 |
| 81 | GO:0009306: protein secretion | 1.03E-02 |
| 82 | GO:0006284: base-excision repair | 1.03E-02 |
| 83 | GO:0016117: carotenoid biosynthetic process | 1.09E-02 |
| 84 | GO:0006633: fatty acid biosynthetic process | 1.13E-02 |
| 85 | GO:0006413: translational initiation | 1.16E-02 |
| 86 | GO:0042335: cuticle development | 1.16E-02 |
| 87 | GO:0006662: glycerol ether metabolic process | 1.22E-02 |
| 88 | GO:0015986: ATP synthesis coupled proton transport | 1.28E-02 |
| 89 | GO:0032502: developmental process | 1.48E-02 |
| 90 | GO:0008380: RNA splicing | 1.49E-02 |
| 91 | GO:0009416: response to light stimulus | 1.51E-02 |
| 92 | GO:1901657: glycosyl compound metabolic process | 1.55E-02 |
| 93 | GO:0009409: response to cold | 1.57E-02 |
| 94 | GO:0010286: heat acclimation | 1.69E-02 |
| 95 | GO:0018298: protein-chromophore linkage | 2.22E-02 |
| 96 | GO:0010119: regulation of stomatal movement | 2.46E-02 |
| 97 | GO:0009853: photorespiration | 2.63E-02 |
| 98 | GO:0034599: cellular response to oxidative stress | 2.71E-02 |
| 99 | GO:0030001: metal ion transport | 2.88E-02 |
| 100 | GO:0042542: response to hydrogen peroxide | 3.06E-02 |
| 101 | GO:0009644: response to high light intensity | 3.33E-02 |
| 102 | GO:0008643: carbohydrate transport | 3.33E-02 |
| 103 | GO:0006397: mRNA processing | 3.68E-02 |
| 104 | GO:0042538: hyperosmotic salinity response | 3.70E-02 |
| 105 | GO:0009585: red, far-red light phototransduction | 3.89E-02 |
| 106 | GO:0006417: regulation of translation | 4.18E-02 |
| 107 | GO:0009626: plant-type hypersensitive response | 4.58E-02 |
| 108 | GO:0042545: cell wall modification | 4.89E-02 |
| 109 | GO:0009734: auxin-activated signaling pathway | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 2 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 3 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 4 | GO:0033819: lipoyl(octanoyl) transferase activity | 0.00E+00 |
| 5 | GO:0004853: uroporphyrinogen decarboxylase activity | 0.00E+00 |
| 6 | GO:0003735: structural constituent of ribosome | 6.23E-07 |
| 7 | GO:0019843: rRNA binding | 6.55E-07 |
| 8 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.25E-04 |
| 9 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.44E-04 |
| 10 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 1.44E-04 |
| 11 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.44E-04 |
| 12 | GO:0016630: protochlorophyllide reductase activity | 3.29E-04 |
| 13 | GO:0004150: dihydroneopterin aldolase activity | 3.29E-04 |
| 14 | GO:0010291: carotene beta-ring hydroxylase activity | 3.29E-04 |
| 15 | GO:0017118: lipoyltransferase activity | 3.29E-04 |
| 16 | GO:0042389: omega-3 fatty acid desaturase activity | 3.29E-04 |
| 17 | GO:0016415: octanoyltransferase activity | 3.29E-04 |
| 18 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 3.29E-04 |
| 19 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.29E-04 |
| 20 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.29E-04 |
| 21 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.29E-04 |
| 22 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 5.40E-04 |
| 23 | GO:0022891: substrate-specific transmembrane transporter activity | 7.50E-04 |
| 24 | GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 7.73E-04 |
| 25 | GO:0004550: nucleoside diphosphate kinase activity | 7.73E-04 |
| 26 | GO:0016851: magnesium chelatase activity | 7.73E-04 |
| 27 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.02E-03 |
| 28 | GO:0043495: protein anchor | 1.02E-03 |
| 29 | GO:0003959: NADPH dehydrogenase activity | 1.29E-03 |
| 30 | GO:0016651: oxidoreductase activity, acting on NAD(P)H | 1.29E-03 |
| 31 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.29E-03 |
| 32 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.29E-03 |
| 33 | GO:0004040: amidase activity | 1.29E-03 |
| 34 | GO:0031177: phosphopantetheine binding | 1.59E-03 |
| 35 | GO:0016168: chlorophyll binding | 1.88E-03 |
| 36 | GO:0000035: acyl binding | 1.91E-03 |
| 37 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.91E-03 |
| 38 | GO:0102483: scopolin beta-glucosidase activity | 2.09E-03 |
| 39 | GO:0019899: enzyme binding | 2.24E-03 |
| 40 | GO:0008235: metalloexopeptidase activity | 2.24E-03 |
| 41 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 2.60E-03 |
| 42 | GO:0008422: beta-glucosidase activity | 3.18E-03 |
| 43 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 3.35E-03 |
| 44 | GO:0008047: enzyme activator activity | 4.18E-03 |
| 45 | GO:0004177: aminopeptidase activity | 4.61E-03 |
| 46 | GO:0004089: carbonate dehydratase activity | 5.52E-03 |
| 47 | GO:0051119: sugar transmembrane transporter activity | 6.50E-03 |
| 48 | GO:0005528: FK506 binding | 7.52E-03 |
| 49 | GO:0043424: protein histidine kinase binding | 8.06E-03 |
| 50 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 9.23E-03 |
| 51 | GO:0003727: single-stranded RNA binding | 1.03E-02 |
| 52 | GO:0047134: protein-disulfide reductase activity | 1.09E-02 |
| 53 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.22E-02 |
| 54 | GO:0004791: thioredoxin-disulfide reductase activity | 1.28E-02 |
| 55 | GO:0048038: quinone binding | 1.41E-02 |
| 56 | GO:0003743: translation initiation factor activity | 1.45E-02 |
| 57 | GO:0016491: oxidoreductase activity | 1.51E-02 |
| 58 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.55E-02 |
| 59 | GO:0016759: cellulose synthase activity | 1.62E-02 |
| 60 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.69E-02 |
| 61 | GO:0004601: peroxidase activity | 1.93E-02 |
| 62 | GO:0008375: acetylglucosaminyltransferase activity | 1.99E-02 |
| 63 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.22E-02 |
| 64 | GO:0005507: copper ion binding | 2.36E-02 |
| 65 | GO:0003993: acid phosphatase activity | 2.71E-02 |
| 66 | GO:0005509: calcium ion binding | 3.31E-02 |
| 67 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.33E-02 |
| 68 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.51E-02 |
| 69 | GO:0009055: electron carrier activity | 3.78E-02 |
| 70 | GO:0003690: double-stranded DNA binding | 3.98E-02 |
| 71 | GO:0045330: aspartyl esterase activity | 4.18E-02 |
| 72 | GO:0004650: polygalacturonase activity | 4.68E-02 |
| 73 | GO:0030599: pectinesterase activity | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 4.36E-37 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 3.11E-27 |
| 5 | GO:0009579: thylakoid | 3.46E-25 |
| 6 | GO:0009570: chloroplast stroma | 5.37E-20 |
| 7 | GO:0009941: chloroplast envelope | 7.87E-16 |
| 8 | GO:0031977: thylakoid lumen | 6.98E-10 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 7.75E-10 |
| 10 | GO:0009534: chloroplast thylakoid | 1.35E-09 |
| 11 | GO:0005840: ribosome | 2.52E-08 |
| 12 | GO:0009654: photosystem II oxygen evolving complex | 4.93E-07 |
| 13 | GO:0019898: extrinsic component of membrane | 8.23E-05 |
| 14 | GO:0009706: chloroplast inner membrane | 1.14E-04 |
| 15 | GO:0009515: granal stacked thylakoid | 1.44E-04 |
| 16 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.44E-04 |
| 17 | GO:0000311: plastid large ribosomal subunit | 2.93E-04 |
| 18 | GO:0042170: plastid membrane | 3.29E-04 |
| 19 | GO:0010007: magnesium chelatase complex | 5.40E-04 |
| 20 | GO:0042651: thylakoid membrane | 5.75E-04 |
| 21 | GO:0042646: plastid nucleoid | 7.73E-04 |
| 22 | GO:0009505: plant-type cell wall | 9.96E-04 |
| 23 | GO:0009523: photosystem II | 1.16E-03 |
| 24 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.59E-03 |
| 25 | GO:0030529: intracellular ribonucleoprotein complex | 1.78E-03 |
| 26 | GO:0016363: nuclear matrix | 1.91E-03 |
| 27 | GO:0015934: large ribosomal subunit | 2.67E-03 |
| 28 | GO:0046658: anchored component of plasma membrane | 2.78E-03 |
| 29 | GO:0009539: photosystem II reaction center | 2.96E-03 |
| 30 | GO:0005763: mitochondrial small ribosomal subunit | 3.35E-03 |
| 31 | GO:0031969: chloroplast membrane | 4.45E-03 |
| 32 | GO:0000312: plastid small ribosomal subunit | 6.00E-03 |
| 33 | GO:0030095: chloroplast photosystem II | 6.00E-03 |
| 34 | GO:0009532: plastid stroma | 8.61E-03 |
| 35 | GO:0071944: cell periphery | 1.55E-02 |
| 36 | GO:0010319: stromule | 1.69E-02 |
| 37 | GO:0048046: apoplast | 2.39E-02 |
| 38 | GO:0031225: anchored component of membrane | 2.65E-02 |
| 39 | GO:0005618: cell wall | 2.77E-02 |
| 40 | GO:0005747: mitochondrial respiratory chain complex I | 4.48E-02 |