GO Enrichment Analysis of Co-expressed Genes with
AT3G01500
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 3 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 4 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 5 | GO:0015979: photosynthesis | 1.27E-21 |
| 6 | GO:0042742: defense response to bacterium | 1.77E-08 |
| 7 | GO:0009773: photosynthetic electron transport in photosystem I | 2.00E-08 |
| 8 | GO:0019253: reductive pentose-phosphate cycle | 5.21E-08 |
| 9 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.46E-07 |
| 10 | GO:0009772: photosynthetic electron transport in photosystem II | 3.12E-07 |
| 11 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 4.96E-07 |
| 12 | GO:0009409: response to cold | 9.08E-07 |
| 13 | GO:0006000: fructose metabolic process | 1.89E-06 |
| 14 | GO:0009735: response to cytokinin | 2.41E-06 |
| 15 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.48E-06 |
| 16 | GO:0015995: chlorophyll biosynthetic process | 3.18E-06 |
| 17 | GO:0018298: protein-chromophore linkage | 3.98E-06 |
| 18 | GO:0010114: response to red light | 1.14E-05 |
| 19 | GO:0015986: ATP synthesis coupled proton transport | 3.24E-05 |
| 20 | GO:0010196: nonphotochemical quenching | 4.14E-05 |
| 21 | GO:0006002: fructose 6-phosphate metabolic process | 6.86E-05 |
| 22 | GO:0009657: plastid organization | 6.86E-05 |
| 23 | GO:0010206: photosystem II repair | 8.49E-05 |
| 24 | GO:0043489: RNA stabilization | 9.69E-05 |
| 25 | GO:0071370: cellular response to gibberellin stimulus | 9.69E-05 |
| 26 | GO:0010218: response to far red light | 1.23E-04 |
| 27 | GO:0009637: response to blue light | 1.50E-04 |
| 28 | GO:0006094: gluconeogenesis | 1.93E-04 |
| 29 | GO:0005986: sucrose biosynthetic process | 1.93E-04 |
| 30 | GO:0010207: photosystem II assembly | 2.19E-04 |
| 31 | GO:0005985: sucrose metabolic process | 2.48E-04 |
| 32 | GO:0055070: copper ion homeostasis | 5.46E-04 |
| 33 | GO:0051513: regulation of monopolar cell growth | 5.46E-04 |
| 34 | GO:0071484: cellular response to light intensity | 5.46E-04 |
| 35 | GO:0006546: glycine catabolic process | 7.26E-04 |
| 36 | GO:0015976: carbon utilization | 7.26E-04 |
| 37 | GO:0019464: glycine decarboxylation via glycine cleavage system | 7.26E-04 |
| 38 | GO:0009765: photosynthesis, light harvesting | 7.26E-04 |
| 39 | GO:0045727: positive regulation of translation | 7.26E-04 |
| 40 | GO:0015994: chlorophyll metabolic process | 7.26E-04 |
| 41 | GO:0032543: mitochondrial translation | 9.17E-04 |
| 42 | GO:0006461: protein complex assembly | 9.17E-04 |
| 43 | GO:0034052: positive regulation of plant-type hypersensitive response | 9.17E-04 |
| 44 | GO:0055114: oxidation-reduction process | 9.34E-04 |
| 45 | GO:0042549: photosystem II stabilization | 1.12E-03 |
| 46 | GO:0017148: negative regulation of translation | 1.34E-03 |
| 47 | GO:0010189: vitamin E biosynthetic process | 1.34E-03 |
| 48 | GO:0009645: response to low light intensity stimulus | 1.57E-03 |
| 49 | GO:0009769: photosynthesis, light harvesting in photosystem II | 1.57E-03 |
| 50 | GO:0043068: positive regulation of programmed cell death | 1.81E-03 |
| 51 | GO:0032544: plastid translation | 2.07E-03 |
| 52 | GO:0006754: ATP biosynthetic process | 2.33E-03 |
| 53 | GO:0006949: syncytium formation | 2.90E-03 |
| 54 | GO:0019684: photosynthesis, light reaction | 3.20E-03 |
| 55 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.20E-03 |
| 56 | GO:0000272: polysaccharide catabolic process | 3.20E-03 |
| 57 | GO:0009750: response to fructose | 3.20E-03 |
| 58 | GO:0009698: phenylpropanoid metabolic process | 3.20E-03 |
| 59 | GO:0006096: glycolytic process | 3.50E-03 |
| 60 | GO:0006006: glucose metabolic process | 3.82E-03 |
| 61 | GO:0006396: RNA processing | 4.33E-03 |
| 62 | GO:0046688: response to copper ion | 4.49E-03 |
| 63 | GO:0006636: unsaturated fatty acid biosynthetic process | 4.83E-03 |
| 64 | GO:0009269: response to desiccation | 5.93E-03 |
| 65 | GO:0009814: defense response, incompatible interaction | 6.31E-03 |
| 66 | GO:0019748: secondary metabolic process | 6.31E-03 |
| 67 | GO:0009411: response to UV | 6.70E-03 |
| 68 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 6.70E-03 |
| 69 | GO:0007623: circadian rhythm | 7.24E-03 |
| 70 | GO:0006810: transport | 7.84E-03 |
| 71 | GO:0080022: primary root development | 7.93E-03 |
| 72 | GO:0000413: protein peptidyl-prolyl isomerization | 7.93E-03 |
| 73 | GO:0042631: cellular response to water deprivation | 7.93E-03 |
| 74 | GO:0010468: regulation of gene expression | 8.64E-03 |
| 75 | GO:0009749: response to glucose | 9.23E-03 |
| 76 | GO:0019252: starch biosynthetic process | 9.23E-03 |
| 77 | GO:0010193: response to ozone | 9.68E-03 |
| 78 | GO:0009828: plant-type cell wall loosening | 1.11E-02 |
| 79 | GO:0009658: chloroplast organization | 1.12E-02 |
| 80 | GO:0042254: ribosome biogenesis | 1.14E-02 |
| 81 | GO:0010027: thylakoid membrane organization | 1.25E-02 |
| 82 | GO:0080167: response to karrikin | 1.39E-02 |
| 83 | GO:0009817: defense response to fungus, incompatible interaction | 1.51E-02 |
| 84 | GO:0045454: cell redox homeostasis | 1.67E-02 |
| 85 | GO:0009631: cold acclimation | 1.68E-02 |
| 86 | GO:0045087: innate immune response | 1.79E-02 |
| 87 | GO:0016051: carbohydrate biosynthetic process | 1.79E-02 |
| 88 | GO:0032259: methylation | 1.97E-02 |
| 89 | GO:0009744: response to sucrose | 2.14E-02 |
| 90 | GO:0006397: mRNA processing | 2.15E-02 |
| 91 | GO:0009644: response to high light intensity | 2.27E-02 |
| 92 | GO:0009664: plant-type cell wall organization | 2.52E-02 |
| 93 | GO:0006364: rRNA processing | 2.65E-02 |
| 94 | GO:0010224: response to UV-B | 2.72E-02 |
| 95 | GO:0006417: regulation of translation | 2.85E-02 |
| 96 | GO:0009626: plant-type hypersensitive response | 3.12E-02 |
| 97 | GO:0009740: gibberellic acid mediated signaling pathway | 3.26E-02 |
| 98 | GO:0009738: abscisic acid-activated signaling pathway | 3.54E-02 |
| 99 | GO:0009611: response to wounding | 3.73E-02 |
| 100 | GO:0006633: fatty acid biosynthetic process | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 2 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 3 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 4 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 5 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 6 | GO:0016168: chlorophyll binding | 4.80E-08 |
| 7 | GO:0031409: pigment binding | 8.98E-08 |
| 8 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 4.96E-07 |
| 9 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 4.96E-07 |
| 10 | GO:0051920: peroxiredoxin activity | 3.05E-05 |
| 11 | GO:0016209: antioxidant activity | 5.40E-05 |
| 12 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 9.69E-05 |
| 13 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 9.69E-05 |
| 14 | GO:0008266: poly(U) RNA binding | 2.19E-04 |
| 15 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.28E-04 |
| 16 | GO:0047746: chlorophyllase activity | 2.28E-04 |
| 17 | GO:0042389: omega-3 fatty acid desaturase activity | 2.28E-04 |
| 18 | GO:0004618: phosphoglycerate kinase activity | 2.28E-04 |
| 19 | GO:0010297: heteropolysaccharide binding | 2.28E-04 |
| 20 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 2.28E-04 |
| 21 | GO:0008967: phosphoglycolate phosphatase activity | 2.28E-04 |
| 22 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 3.80E-04 |
| 23 | GO:0004324: ferredoxin-NADP+ reductase activity | 3.80E-04 |
| 24 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 3.80E-04 |
| 25 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 5.46E-04 |
| 26 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 5.46E-04 |
| 27 | GO:0016851: magnesium chelatase activity | 5.46E-04 |
| 28 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 6.09E-04 |
| 29 | GO:0019843: rRNA binding | 6.69E-04 |
| 30 | GO:0003959: NADPH dehydrogenase activity | 9.17E-04 |
| 31 | GO:0042578: phosphoric ester hydrolase activity | 1.12E-03 |
| 32 | GO:0004602: glutathione peroxidase activity | 1.34E-03 |
| 33 | GO:0004564: beta-fructofuranosidase activity | 1.81E-03 |
| 34 | GO:0015078: hydrogen ion transmembrane transporter activity | 2.07E-03 |
| 35 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 2.07E-03 |
| 36 | GO:0004185: serine-type carboxypeptidase activity | 2.21E-03 |
| 37 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.39E-03 |
| 38 | GO:0004575: sucrose alpha-glucosidase activity | 2.61E-03 |
| 39 | GO:0030234: enzyme regulator activity | 2.90E-03 |
| 40 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.61E-03 |
| 41 | GO:0004089: carbonate dehydratase activity | 3.82E-03 |
| 42 | GO:0031072: heat shock protein binding | 3.82E-03 |
| 43 | GO:0004176: ATP-dependent peptidase activity | 5.93E-03 |
| 44 | GO:0004707: MAP kinase activity | 5.93E-03 |
| 45 | GO:0022891: substrate-specific transmembrane transporter activity | 6.70E-03 |
| 46 | GO:0003756: protein disulfide isomerase activity | 7.10E-03 |
| 47 | GO:0003727: single-stranded RNA binding | 7.10E-03 |
| 48 | GO:0050662: coenzyme binding | 8.79E-03 |
| 49 | GO:0004601: peroxidase activity | 1.12E-02 |
| 50 | GO:0005509: calcium ion binding | 1.68E-02 |
| 51 | GO:0050661: NADP binding | 1.96E-02 |
| 52 | GO:0009055: electron carrier activity | 2.21E-02 |
| 53 | GO:0043621: protein self-association | 2.27E-02 |
| 54 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.39E-02 |
| 55 | GO:0051287: NAD binding | 2.46E-02 |
| 56 | GO:0051082: unfolded protein binding | 3.41E-02 |
| 57 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.07E-02 |
| 58 | GO:0003735: structural constituent of ribosome | 4.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 4.25E-44 |
| 4 | GO:0009507: chloroplast | 1.25E-36 |
| 5 | GO:0009534: chloroplast thylakoid | 6.16E-35 |
| 6 | GO:0009579: thylakoid | 1.23E-29 |
| 7 | GO:0009941: chloroplast envelope | 2.27E-29 |
| 8 | GO:0009570: chloroplast stroma | 5.83E-17 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 3.17E-14 |
| 10 | GO:0010287: plastoglobule | 1.34E-12 |
| 11 | GO:0030095: chloroplast photosystem II | 2.10E-12 |
| 12 | GO:0010319: stromule | 3.97E-10 |
| 13 | GO:0031977: thylakoid lumen | 5.56E-09 |
| 14 | GO:0009523: photosystem II | 1.18E-08 |
| 15 | GO:0009522: photosystem I | 6.97E-07 |
| 16 | GO:0009517: PSII associated light-harvesting complex II | 8.50E-06 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 1.06E-05 |
| 18 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 2.15E-05 |
| 19 | GO:0019898: extrinsic component of membrane | 3.62E-05 |
| 20 | GO:0048046: apoplast | 4.06E-05 |
| 21 | GO:0009706: chloroplast inner membrane | 4.23E-05 |
| 22 | GO:0009538: photosystem I reaction center | 5.40E-05 |
| 23 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 8.49E-05 |
| 24 | GO:0009783: photosystem II antenna complex | 9.69E-05 |
| 25 | GO:0016020: membrane | 1.38E-04 |
| 26 | GO:0042170: plastid membrane | 2.28E-04 |
| 27 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 2.28E-04 |
| 28 | GO:0030076: light-harvesting complex | 2.48E-04 |
| 29 | GO:0031969: chloroplast membrane | 3.48E-04 |
| 30 | GO:0010007: magnesium chelatase complex | 3.80E-04 |
| 31 | GO:0005960: glycine cleavage complex | 5.46E-04 |
| 32 | GO:0005775: vacuolar lumen | 5.46E-04 |
| 33 | GO:0009544: chloroplast ATP synthase complex | 7.26E-04 |
| 34 | GO:0055035: plastid thylakoid membrane | 9.17E-04 |
| 35 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 1.12E-03 |
| 36 | GO:0009533: chloroplast stromal thylakoid | 1.57E-03 |
| 37 | GO:0042644: chloroplast nucleoid | 2.33E-03 |
| 38 | GO:0009508: plastid chromosome | 3.82E-03 |
| 39 | GO:0005840: ribosome | 4.70E-03 |
| 40 | GO:0042651: thylakoid membrane | 5.55E-03 |
| 41 | GO:0015935: small ribosomal subunit | 5.93E-03 |
| 42 | GO:0009295: nucleoid | 1.16E-02 |
| 43 | GO:0030529: intracellular ribonucleoprotein complex | 1.25E-02 |
| 44 | GO:0000325: plant-type vacuole | 1.68E-02 |
| 45 | GO:0031902: late endosome membrane | 2.02E-02 |
| 46 | GO:0005618: cell wall | 3.45E-02 |