co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G01370

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900000: regulation of anthocyanin catabolic process	0.00E+00
2	GO:0090706: specification of plant organ position	0.00E+00
3	GO:0045014: negative regulation of transcription by glucose	0.00E+00
4	GO:0017038: protein import	0.00E+00
5	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
6	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
7	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
8	GO:0046785: microtubule polymerization	3.73E-05
9	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	5.54E-05
10	GO:0010450: inflorescence meristem growth	1.73E-04
11	GO:0000476: maturation of 4.5S rRNA	1.73E-04
12	GO:0000967: rRNA 5'-end processing	1.73E-04
13	GO:0010480: microsporocyte differentiation	1.73E-04
14	GO:0000481: maturation of 5S rRNA	1.73E-04
15	GO:0042547: cell wall modification involved in multidimensional cell growth	1.73E-04
16	GO:0034628: 'de novo' NAD biosynthetic process from aspartate	1.73E-04
17	GO:0043609: regulation of carbon utilization	1.73E-04
18	GO:0034337: RNA folding	1.73E-04
19	GO:0034470: ncRNA processing	3.92E-04
20	GO:0034755: iron ion transmembrane transport	3.92E-04
21	GO:0010207: photosystem II assembly	4.87E-04
22	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	6.40E-04
23	GO:0006000: fructose metabolic process	6.40E-04
24	GO:0006013: mannose metabolic process	6.40E-04
25	GO:0043617: cellular response to sucrose starvation	6.40E-04
26	GO:0051176: positive regulation of sulfur metabolic process	6.40E-04
27	GO:0001578: microtubule bundle formation	6.40E-04
28	GO:0045165: cell fate commitment	6.40E-04
29	GO:0016226: iron-sulfur cluster assembly	8.83E-04
30	GO:0016556: mRNA modification	9.13E-04
31	GO:0051322: anaphase	1.21E-03
32	GO:0006085: acetyl-CoA biosynthetic process	1.21E-03
33	GO:0007020: microtubule nucleation	1.21E-03
34	GO:0042991: transcription factor import into nucleus	1.21E-03
35	GO:0010109: regulation of photosynthesis	1.21E-03
36	GO:0009646: response to absence of light	1.40E-03
37	GO:0010158: abaxial cell fate specification	1.54E-03
38	GO:0032543: mitochondrial translation	1.54E-03
39	GO:1902183: regulation of shoot apical meristem development	1.54E-03
40	GO:0009435: NAD biosynthetic process	1.54E-03
41	GO:0010090: trichome morphogenesis	1.82E-03
42	GO:0000470: maturation of LSU-rRNA	1.89E-03
43	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.89E-03
44	GO:0000741: karyogamy	1.89E-03
45	GO:0006354: DNA-templated transcription, elongation	1.89E-03
46	GO:0010405: arabinogalactan protein metabolic process	1.89E-03
47	GO:0042549: photosystem II stabilization	1.89E-03
48	GO:0042026: protein refolding	2.27E-03
49	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	2.27E-03
50	GO:0006458: 'de novo' protein folding	2.27E-03
51	GO:0048528: post-embryonic root development	2.67E-03
52	GO:0048437: floral organ development	2.67E-03
53	GO:0051510: regulation of unidimensional cell growth	2.67E-03
54	GO:0009690: cytokinin metabolic process	3.09E-03
55	GO:0006605: protein targeting	3.09E-03
56	GO:0032508: DNA duplex unwinding	3.09E-03
57	GO:0006002: fructose 6-phosphate metabolic process	3.54E-03
58	GO:0010093: specification of floral organ identity	3.54E-03
59	GO:0046685: response to arsenic-containing substance	4.00E-03
60	GO:0006098: pentose-phosphate shunt	4.00E-03
61	GO:0048507: meristem development	4.00E-03
62	GO:0010206: photosystem II repair	4.00E-03
63	GO:2000024: regulation of leaf development	4.00E-03
64	GO:0000373: Group II intron splicing	4.00E-03
65	GO:0048589: developmental growth	4.00E-03
66	GO:0009060: aerobic respiration	4.00E-03
67	GO:0042761: very long-chain fatty acid biosynthetic process	4.49E-03
68	GO:0009773: photosynthetic electron transport in photosystem I	5.52E-03
69	GO:0006879: cellular iron ion homeostasis	5.52E-03
70	GO:0048229: gametophyte development	5.52E-03
71	GO:0010152: pollen maturation	6.06E-03
72	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	6.48E-03
73	GO:0006364: rRNA processing	6.55E-03
74	GO:0010102: lateral root morphogenesis	6.61E-03
75	GO:0030048: actin filament-based movement	6.61E-03
76	GO:0009718: anthocyanin-containing compound biosynthetic process	6.61E-03
77	GO:0010075: regulation of meristem growth	6.61E-03
78	GO:0006094: gluconeogenesis	6.61E-03
79	GO:0009767: photosynthetic electron transport chain	6.61E-03
80	GO:0048768: root hair cell tip growth	7.20E-03
81	GO:0009933: meristem structural organization	7.20E-03
82	GO:0009934: regulation of meristem structural organization	7.20E-03
83	GO:0006096: glycolytic process	7.74E-03
84	GO:0010025: wax biosynthetic process	8.41E-03
85	GO:0009944: polarity specification of adaxial/abaxial axis	9.03E-03
86	GO:0006468: protein phosphorylation	9.19E-03
87	GO:0006418: tRNA aminoacylation for protein translation	9.69E-03
88	GO:0043622: cortical microtubule organization	9.69E-03
89	GO:0006629: lipid metabolic process	1.02E-02
90	GO:0061077: chaperone-mediated protein folding	1.03E-02
91	GO:0009814: defense response, incompatible interaction	1.10E-02
92	GO:0080092: regulation of pollen tube growth	1.10E-02
93	GO:0009686: gibberellin biosynthetic process	1.17E-02
94	GO:0071369: cellular response to ethylene stimulus	1.17E-02
95	GO:0048443: stamen development	1.24E-02
96	GO:0048653: anther development	1.39E-02
97	GO:0042631: cellular response to water deprivation	1.39E-02
98	GO:0010268: brassinosteroid homeostasis	1.47E-02
99	GO:0045489: pectin biosynthetic process	1.47E-02
100	GO:0010154: fruit development	1.47E-02
101	GO:0010305: leaf vascular tissue pattern formation	1.47E-02
102	GO:0010197: polar nucleus fusion	1.47E-02
103	GO:0009741: response to brassinosteroid	1.47E-02
104	GO:0009791: post-embryonic development	1.62E-02
105	GO:0048825: cotyledon development	1.62E-02
106	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.70E-02
107	GO:0016132: brassinosteroid biosynthetic process	1.70E-02
108	GO:0016032: viral process	1.78E-02
109	GO:0007166: cell surface receptor signaling pathway	1.85E-02
110	GO:0030163: protein catabolic process	1.87E-02
111	GO:0016125: sterol metabolic process	1.95E-02
112	GO:0071805: potassium ion transmembrane transport	2.04E-02
113	GO:0009416: response to light stimulus	2.11E-02
114	GO:0000910: cytokinesis	2.12E-02
115	GO:0016126: sterol biosynthetic process	2.21E-02
116	GO:0001666: response to hypoxia	2.21E-02
117	GO:0055114: oxidation-reduction process	2.46E-02
118	GO:0015995: chlorophyll biosynthetic process	2.48E-02
119	GO:0009658: chloroplast organization	2.51E-02
120	GO:0042254: ribosome biogenesis	2.56E-02
121	GO:0016311: dephosphorylation	2.58E-02
122	GO:0018298: protein-chromophore linkage	2.67E-02
123	GO:0005975: carbohydrate metabolic process	2.75E-02
124	GO:0006499: N-terminal protein myristoylation	2.87E-02
125	GO:0009910: negative regulation of flower development	2.96E-02
126	GO:0016051: carbohydrate biosynthetic process	3.16E-02
127	GO:0046777: protein autophosphorylation	3.32E-02
128	GO:0051707: response to other organism	3.79E-02
129	GO:0009640: photomorphogenesis	3.79E-02
130	GO:0008283: cell proliferation	3.79E-02
131	GO:0009744: response to sucrose	3.79E-02
132	GO:0006855: drug transmembrane transport	4.23E-02
133	GO:0032259: methylation	4.38E-02
134	GO:0009737: response to abscisic acid	4.50E-02
135	GO:0009585: red, far-red light phototransduction	4.68E-02
136	GO:0006813: potassium ion transport	4.68E-02
137	GO:0009736: cytokinin-activated signaling pathway	4.68E-02
138	GO:0048364: root development	4.76E-02
139	GO:0051603: proteolysis involved in cellular protein catabolic process	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
2	GO:0008987: quinolinate synthetase A activity	0.00E+00
3	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
4	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
5	GO:0004823: leucine-tRNA ligase activity	0.00E+00
6	GO:1990534: thermospermine oxidase activity	0.00E+00
7	GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	1.73E-04
8	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	1.73E-04
9	GO:0051777: ent-kaurenoate oxidase activity	1.73E-04
10	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	1.73E-04
11	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	1.73E-04
12	GO:0004047: aminomethyltransferase activity	3.92E-04
13	GO:0008017: microtubule binding	4.73E-04
14	GO:0015462: ATPase-coupled protein transmembrane transporter activity	6.40E-04
15	GO:0004180: carboxypeptidase activity	6.40E-04
16	GO:0003913: DNA photolyase activity	6.40E-04
17	GO:0002161: aminoacyl-tRNA editing activity	6.40E-04
18	GO:0008253: 5'-nucleotidase activity	6.40E-04
19	GO:0004148: dihydrolipoyl dehydrogenase activity	6.40E-04
20	GO:0016805: dipeptidase activity	6.40E-04
21	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	6.40E-04
22	GO:0003878: ATP citrate synthase activity	9.13E-04
23	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.21E-03
24	GO:0004506: squalene monooxygenase activity	1.21E-03
25	GO:0010011: auxin binding	1.21E-03
26	GO:0003723: RNA binding	1.34E-03
27	GO:0019843: rRNA binding	1.80E-03
28	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.89E-03
29	GO:0004332: fructose-bisphosphate aldolase activity	1.89E-03
30	GO:0042578: phosphoric ester hydrolase activity	1.89E-03
31	GO:2001070: starch binding	1.89E-03
32	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	2.27E-03
33	GO:0004559: alpha-mannosidase activity	2.27E-03
34	GO:0009881: photoreceptor activity	2.67E-03
35	GO:0004033: aldo-keto reductase (NADP) activity	3.09E-03
36	GO:0043022: ribosome binding	3.09E-03
37	GO:0005381: iron ion transmembrane transporter activity	4.49E-03
38	GO:0016787: hydrolase activity	4.83E-03
39	GO:0008047: enzyme activator activity	4.99E-03
40	GO:0005524: ATP binding	5.27E-03
41	GO:0005089: Rho guanyl-nucleotide exchange factor activity	5.52E-03
42	GO:0044183: protein binding involved in protein folding	5.52E-03
43	GO:0004565: beta-galactosidase activity	6.61E-03
44	GO:0031072: heat shock protein binding	6.61E-03
45	GO:0016298: lipase activity	6.78E-03
46	GO:0008131: primary amine oxidase activity	7.20E-03
47	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	7.20E-03
48	GO:0003774: motor activity	7.20E-03
49	GO:0004672: protein kinase activity	7.95E-03
50	GO:0004674: protein serine/threonine kinase activity	8.93E-03
51	GO:0051082: unfolded protein binding	9.33E-03
52	GO:0015079: potassium ion transmembrane transporter activity	9.69E-03
53	GO:0004176: ATP-dependent peptidase activity	1.03E-02
54	GO:0033612: receptor serine/threonine kinase binding	1.03E-02
55	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.03E-02
56	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.10E-02
57	GO:0030570: pectate lyase activity	1.17E-02
58	GO:0016829: lyase activity	1.27E-02
59	GO:0004812: aminoacyl-tRNA ligase activity	1.32E-02
60	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.51E-02
61	GO:0004518: nuclease activity	1.78E-02
62	GO:0008237: metallopeptidase activity	2.04E-02
63	GO:0008168: methyltransferase activity	2.41E-02
64	GO:0008236: serine-type peptidase activity	2.58E-02
65	GO:0016740: transferase activity	2.70E-02
66	GO:0015238: drug transmembrane transporter activity	2.77E-02
67	GO:0050660: flavin adenine dinucleotide binding	2.90E-02
68	GO:0030246: carbohydrate binding	3.05E-02
69	GO:0003993: acid phosphatase activity	3.27E-02
70	GO:0051539: 4 iron, 4 sulfur cluster binding	3.47E-02
71	GO:0004185: serine-type carboxypeptidase activity	3.79E-02
72	GO:0046872: metal ion binding	3.91E-02
73	GO:0035091: phosphatidylinositol binding	4.01E-02
74	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.68E-02
75	GO:0004519: endonuclease activity	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0009571: proplastid stroma	0.00E+00
3	GO:0009507: chloroplast	2.37E-09
4	GO:0009570: chloroplast stroma	3.77E-06
5	GO:0055028: cortical microtubule	7.54E-06
6	GO:0009941: chloroplast envelope	8.78E-05
7	GO:0009535: chloroplast thylakoid membrane	1.23E-04
8	GO:0000428: DNA-directed RNA polymerase complex	1.73E-04
9	GO:0009344: nitrite reductase complex [NAD(P)H]	1.73E-04
10	GO:0009346: citrate lyase complex	9.13E-04
11	GO:0005886: plasma membrane	1.49E-03
12	GO:0072686: mitotic spindle	1.54E-03
13	GO:0009295: nucleoid	2.05E-03
14	GO:0010005: cortical microtubule, transverse to long axis	2.27E-03
15	GO:0009533: chloroplast stromal thylakoid	2.67E-03
16	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.00E-03
17	GO:0016324: apical plasma membrane	4.99E-03
18	GO:0016459: myosin complex	4.99E-03
19	GO:0005874: microtubule	5.94E-03
20	GO:0032040: small-subunit processome	6.06E-03
21	GO:0005938: cell cortex	6.61E-03
22	GO:0009508: plastid chromosome	6.61E-03
23	GO:0009574: preprophase band	6.61E-03
24	GO:0009534: chloroplast thylakoid	6.78E-03
25	GO:0030095: chloroplast photosystem II	7.20E-03
26	GO:0000312: plastid small ribosomal subunit	7.20E-03
27	GO:0030659: cytoplasmic vesicle membrane	7.20E-03
28	GO:0009654: photosystem II oxygen evolving complex	9.69E-03
29	GO:0043231: intracellular membrane-bounded organelle	1.15E-02
30	GO:0019898: extrinsic component of membrane	1.62E-02
31	GO:0046658: anchored component of plasma membrane	2.14E-02
32	GO:0030529: intracellular ribonucleoprotein complex	2.21E-02
33	GO:0005819: spindle	3.37E-02