co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G47970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0030970: retrograde protein transport, ER to cytosol	0.00E+00
2	GO:0036258: multivesicular body assembly	0.00E+00
3	GO:0046740: transport of virus in host, cell to cell	3.00E-05
4	GO:2000072: regulation of defense response to fungus, incompatible interaction	3.00E-05
5	GO:0006556: S-adenosylmethionine biosynthetic process	5.40E-05
6	GO:0070676: intralumenal vesicle formation	8.23E-05
7	GO:0010071: root meristem specification	8.23E-05
8	GO:1901000: regulation of response to salt stress	8.23E-05
9	GO:0009094: L-phenylalanine biosynthetic process	2.25E-04
10	GO:0010078: maintenance of root meristem identity	3.08E-04
11	GO:0010492: maintenance of shoot apical meristem identity	3.08E-04
12	GO:0006896: Golgi to vacuole transport	4.91E-04
13	GO:0000266: mitochondrial fission	5.89E-04
14	GO:0006829: zinc II ion transport	6.40E-04
15	GO:0010053: root epidermal cell differentiation	7.45E-04
16	GO:0010187: negative regulation of seed germination	8.54E-04
17	GO:0009814: defense response, incompatible interaction	1.02E-03
18	GO:0030433: ubiquitin-dependent ERAD pathway	1.02E-03
19	GO:0006730: one-carbon metabolic process	1.02E-03
20	GO:0009693: ethylene biosynthetic process	1.08E-03
21	GO:0019722: calcium-mediated signaling	1.14E-03
22	GO:0080022: primary root development	1.26E-03
23	GO:0055072: iron ion homeostasis	1.46E-03
24	GO:0030163: protein catabolic process	1.66E-03
25	GO:0071281: cellular response to iron ion	1.66E-03
26	GO:0016579: protein deubiquitination	1.87E-03
27	GO:0009817: defense response to fungus, incompatible interaction	2.32E-03
28	GO:0009651: response to salt stress	2.60E-03
29	GO:0009867: jasmonic acid mediated signaling pathway	2.72E-03
30	GO:0045087: innate immune response	2.72E-03
31	GO:0030001: metal ion transport	2.97E-03
32	GO:0006511: ubiquitin-dependent protein catabolic process	3.22E-03
33	GO:0008283: cell proliferation	3.23E-03
34	GO:0031347: regulation of defense response	3.68E-03
35	GO:0048367: shoot system development	4.53E-03
36	GO:0009626: plant-type hypersensitive response	4.63E-03
37	GO:0016569: covalent chromatin modification	4.83E-03
38	GO:0015031: protein transport	6.06E-03
39	GO:0007166: cell surface receptor signaling pathway	8.05E-03
40	GO:0010468: regulation of gene expression	8.30E-03
41	GO:0009793: embryo development ending in seed dormancy	1.11E-02
42	GO:0048366: leaf development	1.12E-02
43	GO:0080167: response to karrikin	1.16E-02
44	GO:0016192: vesicle-mediated transport	1.20E-02
45	GO:0046777: protein autophosphorylation	1.21E-02
46	GO:0009408: response to heat	1.53E-02
47	GO:0048364: root development	1.57E-02
48	GO:0009734: auxin-activated signaling pathway	1.95E-02
49	GO:0009908: flower development	2.14E-02
50	GO:0035556: intracellular signal transduction	2.38E-02
51	GO:0055085: transmembrane transport	2.72E-02
52	GO:0006468: protein phosphorylation	3.71E-02

Rank	GO Term	Adjusted P value
1	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	3.00E-05
2	GO:0004478: methionine adenosyltransferase activity	5.40E-05
3	GO:0047769: arogenate dehydratase activity	1.14E-04
4	GO:0004664: prephenate dehydratase activity	1.14E-04
5	GO:0004526: ribonuclease P activity	1.86E-04
6	GO:0035064: methylated histone binding	3.08E-04
7	GO:0003678: DNA helicase activity	3.97E-04
8	GO:0004713: protein tyrosine kinase activity	4.91E-04
9	GO:0043130: ubiquitin binding	8.54E-04
10	GO:0003729: mRNA binding	9.42E-04
11	GO:0019706: protein-cysteine S-palmitoyltransferase activity	9.65E-04
12	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	9.65E-04
13	GO:0046873: metal ion transmembrane transporter activity	1.33E-03
14	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.52E-03
15	GO:0016597: amino acid binding	1.87E-03
16	GO:0005515: protein binding	2.47E-03
17	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.89E-03
18	GO:0035091: phosphatidylinositol binding	3.41E-03
19	GO:0004674: protein serine/threonine kinase activity	4.22E-03
20	GO:0008017: microtubule binding	7.57E-03
21	GO:0046982: protein heterodimerization activity	9.82E-03
22	GO:0042803: protein homodimerization activity	1.36E-02
23	GO:0004871: signal transducer activity	1.36E-02
24	GO:0003924: GTPase activity	1.53E-02
25	GO:0005524: ATP binding	1.60E-02
26	GO:0008289: lipid binding	1.93E-02
27	GO:0030246: carbohydrate binding	2.84E-02
28	GO:0005525: GTP binding	3.27E-02
29	GO:0003723: RNA binding	3.74E-02
30	GO:0004842: ubiquitin-protein transferase activity	4.78E-02
31	GO:0004672: protein kinase activity	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0000813: ESCRT I complex	1.49E-04
2	GO:0030136: clathrin-coated vesicle	1.20E-03
3	GO:0005788: endoplasmic reticulum lumen	2.02E-03
4	GO:0019005: SCF ubiquitin ligase complex	2.32E-03
5	GO:0031902: late endosome membrane	3.06E-03
6	GO:0009524: phragmoplast	6.09E-03
7	GO:0005783: endoplasmic reticulum	6.56E-03
8	GO:0005829: cytosol	8.72E-03
9	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.06E-02
10	GO:0005874: microtubule	1.13E-02
11	GO:0005774: vacuolar membrane	1.66E-02
12	GO:0005794: Golgi apparatus	2.17E-02
13	GO:0016020: membrane	2.60E-02
14	GO:0005802: trans-Golgi network	3.21E-02
15	GO:0005768: endosome	3.52E-02
16	GO:0005840: ribosome	3.93E-02
17	GO:0009536: plastid	4.39E-02
18	GO:0000139: Golgi membrane	4.71E-02
19	GO:0005886: plasma membrane	4.82E-02