Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G47940

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0061157: mRNA destabilization0.00E+00
2GO:0099131: ATP hydrolysis coupled ion transmembrane transport0.00E+00
3GO:2000505: regulation of energy homeostasis0.00E+00
4GO:0002184: cytoplasmic translational termination0.00E+00
5GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
6GO:0090706: specification of plant organ position0.00E+00
7GO:1901918: negative regulation of exoribonuclease activity0.00E+00
8GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
9GO:0006780: uroporphyrinogen III biosynthetic process0.00E+00
10GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
11GO:0033494: ferulate metabolic process0.00E+00
12GO:1901698: response to nitrogen compound0.00E+00
13GO:0006399: tRNA metabolic process0.00E+00
14GO:2000121: regulation of removal of superoxide radicals0.00E+00
15GO:0061635: regulation of protein complex stability0.00E+00
16GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
17GO:0005996: monosaccharide metabolic process0.00E+00
18GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
19GO:0034337: RNA folding0.00E+00
20GO:0090042: tubulin deacetylation0.00E+00
21GO:0006429: leucyl-tRNA aminoacylation0.00E+00
22GO:0018023: peptidyl-lysine trimethylation0.00E+00
23GO:0016553: base conversion or substitution editing0.00E+00
24GO:0010275: NAD(P)H dehydrogenase complex assembly0.00E+00
25GO:0000372: Group I intron splicing0.00E+00
26GO:0015979: photosynthesis4.00E-13
27GO:0015995: chlorophyll biosynthetic process5.25E-13
28GO:0032544: plastid translation1.60E-10
29GO:0010027: thylakoid membrane organization2.36E-09
30GO:0009773: photosynthetic electron transport in photosystem I3.77E-09
31GO:0042254: ribosome biogenesis1.78E-08
32GO:0010207: photosystem II assembly2.06E-08
33GO:0006412: translation7.89E-08
34GO:0045038: protein import into chloroplast thylakoid membrane8.91E-07
35GO:0006000: fructose metabolic process2.20E-06
36GO:0009735: response to cytokinin3.17E-06
37GO:0009772: photosynthetic electron transport in photosystem II8.90E-06
38GO:0010206: photosystem II repair3.65E-05
39GO:0006782: protoporphyrinogen IX biosynthetic process7.23E-05
40GO:0034755: iron ion transmembrane transport7.63E-05
41GO:0030388: fructose 1,6-bisphosphate metabolic process7.63E-05
42GO:0042549: photosystem II stabilization9.22E-05
43GO:0006094: gluconeogenesis1.61E-04
44GO:0006518: peptide metabolic process2.25E-04
45GO:0006002: fructose 6-phosphate metabolic process3.92E-04
46GO:0071482: cellular response to light stimulus3.92E-04
47GO:2001141: regulation of RNA biosynthetic process4.36E-04
48GO:0080170: hydrogen peroxide transmembrane transport4.36E-04
49GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly4.36E-04
50GO:0006779: porphyrin-containing compound biosynthetic process6.33E-04
51GO:0045727: positive regulation of translation7.04E-04
52GO:0015994: chlorophyll metabolic process7.04E-04
53GO:0006546: glycine catabolic process7.04E-04
54GO:0018119: peptidyl-cysteine S-nitrosylation9.42E-04
55GO:0000413: protein peptidyl-prolyl isomerization9.58E-04
56GO:0032543: mitochondrial translation1.03E-03
57GO:0016024: CDP-diacylglycerol biosynthetic process1.12E-03
58GO:0008152: metabolic process1.19E-03
59GO:0055114: oxidation-reduction process1.20E-03
60GO:0006096: glycolytic process1.32E-03
61GO:0009767: photosynthetic electron transport chain1.33E-03
62GO:0060627: regulation of vesicle-mediated transport1.42E-03
63GO:1904966: positive regulation of vitamin E biosynthetic process1.42E-03
64GO:0043266: regulation of potassium ion transport1.42E-03
65GO:0071370: cellular response to gibberellin stimulus1.42E-03
66GO:0010480: microsporocyte differentiation1.42E-03
67GO:0031338: regulation of vesicle fusion1.42E-03
68GO:0006723: cuticle hydrocarbon biosynthetic process1.42E-03
69GO:0000481: maturation of 5S rRNA1.42E-03
70GO:0042547: cell wall modification involved in multidimensional cell growth1.42E-03
71GO:1904964: positive regulation of phytol biosynthetic process1.42E-03
72GO:0042371: vitamin K biosynthetic process1.42E-03
73GO:0065002: intracellular protein transmembrane transport1.42E-03
74GO:0071461: cellular response to redox state1.42E-03
75GO:2000021: regulation of ion homeostasis1.42E-03
76GO:0034628: 'de novo' NAD biosynthetic process from aspartate1.42E-03
77GO:0043609: regulation of carbon utilization1.42E-03
78GO:0000476: maturation of 4.5S rRNA1.42E-03
79GO:1902458: positive regulation of stomatal opening1.42E-03
80GO:0006655: phosphatidylglycerol biosynthetic process1.42E-03
81GO:0043953: protein transport by the Tat complex1.42E-03
82GO:0010028: xanthophyll cycle1.42E-03
83GO:0000967: rRNA 5'-end processing1.42E-03
84GO:0046520: sphingoid biosynthetic process1.42E-03
85GO:0006824: cobalt ion transport1.42E-03
86GO:0070509: calcium ion import1.42E-03
87GO:0007263: nitric oxide mediated signal transduction1.42E-03
88GO:0006086: acetyl-CoA biosynthetic process from pyruvate1.42E-03
89GO:0010450: inflorescence meristem growth1.42E-03
90GO:0043489: RNA stabilization1.42E-03
91GO:0071588: hydrogen peroxide mediated signaling pathway1.42E-03
92GO:0010729: positive regulation of hydrogen peroxide biosynthetic process1.42E-03
93GO:0009658: chloroplast organization1.56E-03
94GO:0010019: chloroplast-nucleus signaling pathway1.89E-03
95GO:0042372: phylloquinone biosynthetic process1.89E-03
96GO:0006810: transport2.26E-03
97GO:0009645: response to low light intensity stimulus2.43E-03
98GO:0006614: SRP-dependent cotranslational protein targeting to membrane2.43E-03
99GO:0010196: nonphotochemical quenching2.43E-03
100GO:0006605: protein targeting3.05E-03
101GO:0061077: chaperone-mediated protein folding3.09E-03
102GO:0045717: negative regulation of fatty acid biosynthetic process3.16E-03
103GO:0010541: acropetal auxin transport3.16E-03
104GO:0018026: peptidyl-lysine monomethylation3.16E-03
105GO:0001736: establishment of planar polarity3.16E-03
106GO:1902326: positive regulation of chlorophyll biosynthetic process3.16E-03
107GO:0016122: xanthophyll metabolic process3.16E-03
108GO:0080151: positive regulation of salicylic acid mediated signaling pathway3.16E-03
109GO:1903426: regulation of reactive oxygen species biosynthetic process3.16E-03
110GO:0016560: protein import into peroxisome matrix, docking3.16E-03
111GO:0080005: photosystem stoichiometry adjustment3.16E-03
112GO:0006521: regulation of cellular amino acid metabolic process3.16E-03
113GO:0010270: photosystem II oxygen evolving complex assembly3.16E-03
114GO:1900871: chloroplast mRNA modification3.16E-03
115GO:0034470: ncRNA processing3.16E-03
116GO:0010411: xyloglucan metabolic process3.45E-03
117GO:0009409: response to cold3.65E-03
118GO:0009657: plastid organization3.74E-03
119GO:0018298: protein-chromophore linkage4.04E-03
120GO:0009306: protein secretion4.36E-03
121GO:0006783: heme biosynthetic process4.51E-03
122GO:0048507: meristem development4.51E-03
123GO:0051176: positive regulation of sulfur metabolic process5.28E-03
124GO:0045493: xylan catabolic process5.28E-03
125GO:0090630: activation of GTPase activity5.28E-03
126GO:0043447: alkane biosynthetic process5.28E-03
127GO:2001295: malonyl-CoA biosynthetic process5.28E-03
128GO:0045165: cell fate commitment5.28E-03
129GO:0006013: mannose metabolic process5.28E-03
130GO:0010160: formation of animal organ boundary5.28E-03
131GO:0006954: inflammatory response5.28E-03
132GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition5.28E-03
133GO:0071705: nitrogen compound transport5.28E-03
134GO:0090391: granum assembly5.28E-03
135GO:0010205: photoinhibition5.36E-03
136GO:0009638: phototropism5.36E-03
137GO:0034220: ion transmembrane transport5.36E-03
138GO:1900865: chloroplast RNA modification5.36E-03
139GO:0045490: pectin catabolic process5.77E-03
140GO:0009958: positive gravitropism5.91E-03
141GO:0006352: DNA-templated transcription, initiation7.30E-03
142GO:0019684: photosynthesis, light reaction7.30E-03
143GO:0009073: aromatic amino acid family biosynthetic process7.30E-03
144GO:0051639: actin filament network formation7.74E-03
145GO:0009152: purine ribonucleotide biosynthetic process7.74E-03
146GO:0046653: tetrahydrofolate metabolic process7.74E-03
147GO:0034059: response to anoxia7.74E-03
148GO:0043572: plastid fission7.74E-03
149GO:0055070: copper ion homeostasis7.74E-03
150GO:0006515: misfolded or incompletely synthesized protein catabolic process7.74E-03
151GO:0043481: anthocyanin accumulation in tissues in response to UV light7.74E-03
152GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity7.74E-03
153GO:0009052: pentose-phosphate shunt, non-oxidative branch7.74E-03
154GO:1902476: chloride transmembrane transport7.74E-03
155GO:0009226: nucleotide-sugar biosynthetic process7.74E-03
156GO:0051513: regulation of monopolar cell growth7.74E-03
157GO:0016556: mRNA modification7.74E-03
158GO:0071484: cellular response to light intensity7.74E-03
159GO:0010731: protein glutathionylation7.74E-03
160GO:0006424: glutamyl-tRNA aminoacylation7.74E-03
161GO:1901332: negative regulation of lateral root development7.74E-03
162GO:0015706: nitrate transport8.40E-03
163GO:0010114: response to red light8.65E-03
164GO:0009718: anthocyanin-containing compound biosynthetic process9.58E-03
165GO:0005986: sucrose biosynthetic process9.58E-03
166GO:0009644: response to high light intensity9.76E-03
167GO:0051764: actin crosslink formation1.05E-02
168GO:0019464: glycine decarboxylation via glycine cleavage system1.05E-02
169GO:0071249: cellular response to nitrate1.05E-02
170GO:0010021: amylopectin biosynthetic process1.05E-02
171GO:0010037: response to carbon dioxide1.05E-02
172GO:2000122: negative regulation of stomatal complex development1.05E-02
173GO:0030104: water homeostasis1.05E-02
174GO:0015976: carbon utilization1.05E-02
175GO:0010023: proanthocyanidin biosynthetic process1.05E-02
176GO:0010143: cutin biosynthetic process1.09E-02
177GO:0019253: reductive pentose-phosphate cycle1.09E-02
178GO:0045454: cell redox homeostasis1.11E-02
179GO:0010167: response to nitrate1.22E-02
180GO:0005985: sucrose metabolic process1.22E-02
181GO:0010158: abaxial cell fate specification1.36E-02
182GO:0006564: L-serine biosynthetic process1.36E-02
183GO:0006465: signal peptide processing1.36E-02
184GO:0010236: plastoquinone biosynthetic process1.36E-02
185GO:0009247: glycolipid biosynthetic process1.36E-02
186GO:0034052: positive regulation of plant-type hypersensitive response1.36E-02
187GO:0035434: copper ion transmembrane transport1.36E-02
188GO:0006461: protein complex assembly1.36E-02
189GO:0000304: response to singlet oxygen1.36E-02
190GO:0009107: lipoate biosynthetic process1.36E-02
191GO:0016120: carotene biosynthetic process1.36E-02
192GO:1902183: regulation of shoot apical meristem development1.36E-02
193GO:0016123: xanthophyll biosynthetic process1.36E-02
194GO:0009435: NAD biosynthetic process1.36E-02
195GO:0006636: unsaturated fatty acid biosynthetic process1.37E-02
196GO:0006364: rRNA processing1.37E-02
197GO:0006833: water transport1.37E-02
198GO:0042128: nitrate assimilation1.45E-02
199GO:0006633: fatty acid biosynthetic process1.52E-02
200GO:0019344: cysteine biosynthetic process1.52E-02
201GO:0009768: photosynthesis, light harvesting in photosystem I1.68E-02
202GO:0006418: tRNA aminoacylation for protein translation1.68E-02
203GO:0007017: microtubule-based process1.68E-02
204GO:0000470: maturation of LSU-rRNA1.70E-02
205GO:0016554: cytidine to uridine editing1.70E-02
206GO:0006354: DNA-templated transcription, elongation1.70E-02
207GO:0010405: arabinogalactan protein metabolic process1.70E-02
208GO:0006828: manganese ion transport1.70E-02
209GO:0006751: glutathione catabolic process1.70E-02
210GO:0032973: amino acid export1.70E-02
211GO:0060918: auxin transport1.70E-02
212GO:0018258: protein O-linked glycosylation via hydroxyproline1.70E-02
213GO:1902456: regulation of stomatal opening1.70E-02
214GO:0000741: karyogamy1.70E-02
215GO:0010190: cytochrome b6f complex assembly1.70E-02
216GO:0010256: endomembrane system organization1.70E-02
217GO:0007623: circadian rhythm1.79E-02
218GO:0009723: response to ethylene1.81E-02
219GO:0010218: response to far red light2.00E-02
220GO:0009814: defense response, incompatible interaction2.03E-02
221GO:0016226: iron-sulfur cluster assembly2.03E-02
222GO:0006694: steroid biosynthetic process2.07E-02
223GO:0009942: longitudinal axis specification2.07E-02
224GO:0009854: oxidative photosynthetic carbon pathway2.07E-02
225GO:0042026: protein refolding2.07E-02
226GO:0010555: response to mannitol2.07E-02
227GO:1901259: chloroplast rRNA processing2.07E-02
228GO:0009612: response to mechanical stimulus2.07E-02
229GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2.07E-02
230GO:0006458: 'de novo' protein folding2.07E-02
231GO:0009793: embryo development ending in seed dormancy2.10E-02
232GO:0005975: carbohydrate metabolic process2.20E-02
233GO:0009637: response to blue light2.39E-02
234GO:0010444: guard mother cell differentiation2.46E-02
235GO:0043090: amino acid import2.46E-02
236GO:0051510: regulation of unidimensional cell growth2.46E-02
237GO:0048437: floral organ development2.46E-02
238GO:0006821: chloride transport2.46E-02
239GO:0050829: defense response to Gram-negative bacterium2.46E-02
240GO:1900057: positive regulation of leaf senescence2.46E-02
241GO:0006508: proteolysis2.80E-02
242GO:0030001: metal ion transport2.82E-02
243GO:0042631: cellular response to water deprivation2.84E-02
244GO:0009850: auxin metabolic process2.87E-02
245GO:0043068: positive regulation of programmed cell death2.87E-02
246GO:0048564: photosystem I assembly2.87E-02
247GO:0019375: galactolipid biosynthetic process2.87E-02
248GO:0032508: DNA duplex unwinding2.87E-02
249GO:2000070: regulation of response to water deprivation2.87E-02
250GO:0045010: actin nucleation2.87E-02
251GO:0010492: maintenance of shoot apical meristem identity2.87E-02
252GO:0008610: lipid biosynthetic process2.87E-02
253GO:0009819: drought recovery2.87E-02
254GO:0009642: response to light intensity2.87E-02
255GO:0006402: mRNA catabolic process2.87E-02
256GO:0030091: protein repair2.87E-02
257GO:0042742: defense response to bacterium2.90E-02
258GO:0009741: response to brassinosteroid3.06E-02
259GO:0006526: arginine biosynthetic process3.30E-02
260GO:0017004: cytochrome complex assembly3.30E-02
261GO:0009808: lignin metabolic process3.30E-02
262GO:0010093: specification of floral organ identity3.30E-02
263GO:0009640: photomorphogenesis3.30E-02
264GO:0009932: cell tip growth3.30E-02
265GO:0042546: cell wall biogenesis3.46E-02
266GO:0009826: unidimensional cell growth3.52E-02
267GO:0009051: pentose-phosphate shunt, oxidative branch3.76E-02
268GO:0000373: Group II intron splicing3.76E-02
269GO:0006098: pentose-phosphate shunt3.76E-02
270GO:0009060: aerobic respiration3.76E-02
271GO:0009821: alkaloid biosynthetic process3.76E-02
272GO:0090305: nucleic acid phosphodiester bond hydrolysis3.76E-02
273GO:0080144: amino acid homeostasis3.76E-02
274GO:2000024: regulation of leaf development3.76E-02
275GO:0071554: cell wall organization or biogenesis3.78E-02
276GO:0016132: brassinosteroid biosynthetic process3.78E-02
277GO:0000302: response to reactive oxygen species3.78E-02
278GO:0042744: hydrogen peroxide catabolic process3.94E-02
279GO:0009790: embryo development4.08E-02
280GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process4.23E-02
281GO:0046686: response to cadmium ion4.54E-02
282GO:0009567: double fertilization forming a zygote and endosperm4.58E-02
283GO:0006535: cysteine biosynthetic process from serine4.73E-02
284GO:0043069: negative regulation of programmed cell death4.73E-02
285GO:0048829: root cap development4.73E-02
286GO:0009870: defense response signaling pathway, resistance gene-dependent4.73E-02
287GO:0009585: red, far-red light phototransduction4.77E-02
288GO:0051603: proteolysis involved in cellular protein catabolic process4.97E-02
RankGO TermAdjusted P value
1GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity0.00E+00
2GO:0043014: alpha-tubulin binding0.00E+00
3GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
4GO:0005222: intracellular cAMP activated cation channel activity0.00E+00
5GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
6GO:0004823: leucine-tRNA ligase activity0.00E+00
7GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
8GO:0047513: 1,2-alpha-L-fucosidase activity0.00E+00
9GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
10GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
11GO:0046422: violaxanthin de-epoxidase activity0.00E+00
12GO:0008987: quinolinate synthetase A activity0.00E+00
13GO:0004852: uroporphyrinogen-III synthase activity0.00E+00
14GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
15GO:0051721: protein phosphatase 2A binding0.00E+00
16GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
17GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
18GO:0042903: tubulin deacetylase activity0.00E+00
19GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
20GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
21GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
22GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors0.00E+00
23GO:0004822: isoleucine-tRNA ligase activity0.00E+00
24GO:0043864: indoleacetamide hydrolase activity0.00E+00
25GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
26GO:0008887: glycerate kinase activity0.00E+00
27GO:0005048: signal sequence binding0.00E+00
28GO:0050614: delta24-sterol reductase activity0.00E+00
29GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
30GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
31GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity0.00E+00
32GO:0019843: rRNA binding4.30E-22
33GO:0003755: peptidyl-prolyl cis-trans isomerase activity5.53E-12
34GO:0003735: structural constituent of ribosome5.86E-11
35GO:0005528: FK506 binding6.58E-11
36GO:0051920: peroxiredoxin activity4.76E-06
37GO:0016851: magnesium chelatase activity9.78E-06
38GO:0016209: antioxidant activity1.52E-05
39GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity7.63E-05
40GO:0009977: proton motive force dependent protein transmembrane transporter activity7.63E-05
41GO:0002161: aminoacyl-tRNA editing activity2.25E-04
42GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity7.04E-04
43GO:0016987: sigma factor activity7.04E-04
44GO:0001053: plastid sigma factor activity7.04E-04
45GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor7.04E-04
46GO:0004222: metalloendopeptidase activity1.05E-03
47GO:0004332: fructose-bisphosphate aldolase activity1.42E-03
48GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity1.42E-03
49GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity1.42E-03
50GO:0004328: formamidase activity1.42E-03
51GO:0080132: fatty acid alpha-hydroxylase activity1.42E-03
52GO:0008200: ion channel inhibitor activity1.42E-03
53GO:0005221: intracellular cyclic nucleotide activated cation channel activity1.42E-03
54GO:0004655: porphobilinogen synthase activity1.42E-03
55GO:0004130: cytochrome-c peroxidase activity1.42E-03
56GO:0003867: 4-aminobutyrate transaminase activity1.42E-03
57GO:0051777: ent-kaurenoate oxidase activity1.42E-03
58GO:0009671: nitrate:proton symporter activity1.42E-03
59GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.42E-03
60GO:0004856: xylulokinase activity1.42E-03
61GO:0004853: uroporphyrinogen decarboxylase activity1.42E-03
62GO:0052638: indole-3-butyrate beta-glucosyltransferase activity1.42E-03
63GO:0045485: omega-6 fatty acid desaturase activity1.42E-03
64GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity1.42E-03
65GO:0000170: sphingosine hydroxylase activity1.42E-03
66GO:0050139: nicotinate-N-glucosyltransferase activity1.42E-03
67GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity1.42E-03
68GO:0046906: tetrapyrrole binding1.42E-03
69GO:0008266: poly(U) RNA binding1.56E-03
70GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.89E-03
71GO:0004017: adenylate kinase activity1.89E-03
72GO:0019899: enzyme binding2.43E-03
73GO:0016597: amino acid binding2.44E-03
74GO:0016168: chlorophyll binding2.91E-03
75GO:0004033: aldo-keto reductase (NADP) activity3.05E-03
76GO:0004176: ATP-dependent peptidase activity3.09E-03
77GO:0033201: alpha-1,4-glucan synthase activity3.16E-03
78GO:0017118: lipoyltransferase activity3.16E-03
79GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity3.16E-03
80GO:0042284: sphingolipid delta-4 desaturase activity3.16E-03
81GO:0010283: pinoresinol reductase activity3.16E-03
82GO:0047746: chlorophyllase activity3.16E-03
83GO:0042389: omega-3 fatty acid desaturase activity3.16E-03
84GO:0016868: intramolecular transferase activity, phosphotransferases3.16E-03
85GO:0015929: hexosaminidase activity3.16E-03
86GO:0004563: beta-N-acetylhexosaminidase activity3.16E-03
87GO:0004618: phosphoglycerate kinase activity3.16E-03
88GO:0010297: heteropolysaccharide binding3.16E-03
89GO:0003839: gamma-glutamylcyclotransferase activity3.16E-03
90GO:0004617: phosphoglycerate dehydrogenase activity3.16E-03
91GO:0016415: octanoyltransferase activity3.16E-03
92GO:0008967: phosphoglycolate phosphatase activity3.16E-03
93GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity3.16E-03
94GO:0004047: aminomethyltransferase activity3.16E-03
95GO:0004802: transketolase activity3.16E-03
96GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase3.16E-03
97GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity3.16E-03
98GO:0030570: pectate lyase activity3.90E-03
99GO:0016787: hydrolase activity4.28E-03
100GO:0004601: peroxidase activity4.71E-03
101GO:0004075: biotin carboxylase activity5.28E-03
102GO:0010277: chlorophyllide a oxygenase [overall] activity5.28E-03
103GO:0004751: ribose-5-phosphate isomerase activity5.28E-03
104GO:0045174: glutathione dehydrogenase (ascorbate) activity5.28E-03
105GO:0016531: copper chaperone activity5.28E-03
106GO:0030267: glyoxylate reductase (NADP) activity5.28E-03
107GO:0004373: glycogen (starch) synthase activity5.28E-03
108GO:0019829: cation-transporting ATPase activity5.28E-03
109GO:0016742: hydroxymethyl-, formyl- and related transferase activity5.28E-03
110GO:0050734: hydroxycinnamoyltransferase activity5.28E-03
111GO:0008864: formyltetrahydrofolate deformylase activity5.28E-03
112GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor5.28E-03
113GO:0004148: dihydrolipoyl dehydrogenase activity5.28E-03
114GO:0005381: iron ion transmembrane transporter activity5.36E-03
115GO:0016491: oxidoreductase activity7.05E-03
116GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity7.74E-03
117GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides7.74E-03
118GO:0004375: glycine dehydrogenase (decarboxylating) activity7.74E-03
119GO:0019201: nucleotide kinase activity7.74E-03
120GO:0043023: ribosomal large subunit binding7.74E-03
121GO:0008097: 5S rRNA binding7.74E-03
122GO:0035250: UDP-galactosyltransferase activity7.74E-03
123GO:0001872: (1->3)-beta-D-glucan binding7.74E-03
124GO:0048487: beta-tubulin binding7.74E-03
125GO:0016149: translation release factor activity, codon specific7.74E-03
126GO:0048038: quinone binding7.78E-03
127GO:0016762: xyloglucan:xyloglucosyl transferase activity7.78E-03
128GO:0004185: serine-type carboxypeptidase activity8.65E-03
129GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds9.52E-03
130GO:0051537: 2 iron, 2 sulfur cluster binding9.76E-03
131GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed1.05E-02
132GO:0005253: anion channel activity1.05E-02
133GO:0004045: aminoacyl-tRNA hydrolase activity1.05E-02
134GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity1.05E-02
135GO:0046556: alpha-L-arabinofuranosidase activity1.05E-02
136GO:0010328: auxin influx transmembrane transporter activity1.05E-02
137GO:1990137: plant seed peroxidase activity1.05E-02
138GO:0004659: prenyltransferase activity1.05E-02
139GO:0016279: protein-lysine N-methyltransferase activity1.05E-02
140GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds1.05E-02
141GO:0043495: protein anchor1.05E-02
142GO:0009011: starch synthase activity1.05E-02
143GO:0009044: xylan 1,4-beta-xylosidase activity1.05E-02
144GO:0010011: auxin binding1.05E-02
145GO:0004345: glucose-6-phosphate dehydrogenase activity1.05E-02
146GO:0016836: hydro-lyase activity1.05E-02
147GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.05E-02
148GO:0004252: serine-type endopeptidase activity1.23E-02
149GO:0015250: water channel activity1.26E-02
150GO:0008374: O-acyltransferase activity1.36E-02
151GO:0016773: phosphotransferase activity, alcohol group as acceptor1.36E-02
152GO:0003989: acetyl-CoA carboxylase activity1.36E-02
153GO:0003959: NADPH dehydrogenase activity1.36E-02
154GO:0017137: Rab GTPase binding1.36E-02
155GO:0004040: amidase activity1.36E-02
156GO:0031409: pigment binding1.37E-02
157GO:0016798: hydrolase activity, acting on glycosyl bonds1.55E-02
158GO:0008236: serine-type peptidase activity1.66E-02
159GO:0016688: L-ascorbate peroxidase activity1.70E-02
160GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.70E-02
161GO:0005247: voltage-gated chloride channel activity1.70E-02
162GO:2001070: starch binding1.70E-02
163GO:0042578: phosphoric ester hydrolase activity1.70E-02
164GO:0016208: AMP binding1.70E-02
165GO:1990714: hydroxyproline O-galactosyltransferase activity1.70E-02
166GO:0003723: RNA binding1.84E-02
167GO:0005096: GTPase activator activity1.88E-02
168GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.07E-02
169GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.07E-02
170GO:0004559: alpha-mannosidase activity2.07E-02
171GO:0005242: inward rectifier potassium channel activity2.07E-02
172GO:0005261: cation channel activity2.07E-02
173GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.07E-02
174GO:0004124: cysteine synthase activity2.07E-02
175GO:0022891: substrate-specific transmembrane transporter activity2.22E-02
176GO:0005509: calcium ion binding2.36E-02
177GO:0003727: single-stranded RNA binding2.42E-02
178GO:0004812: aminoacyl-tRNA ligase activity2.62E-02
179GO:0042802: identical protein binding2.70E-02
180GO:0043022: ribosome binding2.87E-02
181GO:0008312: 7S RNA binding2.87E-02
182GO:0004034: aldose 1-epimerase activity2.87E-02
183GO:0004564: beta-fructofuranosidase activity2.87E-02
184GO:0050662: coenzyme binding3.29E-02
185GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)3.30E-02
186GO:0005375: copper ion transmembrane transporter activity3.30E-02
187GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water3.30E-02
188GO:0005515: protein binding3.49E-02
189GO:0003824: catalytic activity3.65E-02
190GO:0016829: lyase activity3.66E-02
191GO:0003747: translation release factor activity3.76E-02
192GO:0015293: symporter activity3.81E-02
193GO:0016788: hydrolase activity, acting on ester bonds3.87E-02
194GO:0051287: NAD binding4.18E-02
195GO:0004575: sucrose alpha-glucosidase activity4.23E-02
196GO:0016844: strictosidine synthase activity4.23E-02
197GO:0015112: nitrate transmembrane transporter activity4.23E-02
198GO:0005384: manganese ion transmembrane transporter activity4.23E-02
199GO:0008047: enzyme activator activity4.73E-02
200GO:0004805: trehalose-phosphatase activity4.73E-02
201GO:0003899: DNA-directed 5'-3' RNA polymerase activity4.77E-02
202GO:0005200: structural constituent of cytoskeleton4.86E-02
203GO:0008237: metallopeptidase activity4.86E-02
204GO:0004519: endonuclease activity4.96E-02
RankGO TermAdjusted P value
1GO:0098572: stromal side of plastid thylakoid membrane0.00E+00
2GO:0009344: nitrite reductase complex [NAD(P)H]0.00E+00
3GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
4GO:0043233: organelle lumen0.00E+00
5GO:0009571: proplastid stroma0.00E+00
6GO:0044391: ribosomal subunit0.00E+00
7GO:0043235: receptor complex0.00E+00
8GO:0009507: chloroplast1.28E-119
9GO:0009570: chloroplast stroma2.82E-74
10GO:0009535: chloroplast thylakoid membrane4.56E-62
11GO:0009941: chloroplast envelope1.06E-55
12GO:0009534: chloroplast thylakoid2.76E-53
13GO:0009543: chloroplast thylakoid lumen1.21E-38
14GO:0009579: thylakoid2.00E-28
15GO:0031977: thylakoid lumen6.67E-23
16GO:0030095: chloroplast photosystem II1.61E-13
17GO:0005840: ribosome4.90E-12
18GO:0009654: photosystem II oxygen evolving complex4.09E-09
19GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)2.67E-08
20GO:0019898: extrinsic component of membrane1.15E-07
21GO:0031969: chloroplast membrane4.75E-07
22GO:0010007: magnesium chelatase complex2.20E-06
23GO:0010287: plastoglobule5.90E-06
24GO:0048046: apoplast7.71E-06
25GO:0009505: plant-type cell wall8.70E-06
26GO:0009533: chloroplast stromal thylakoid8.90E-06
27GO:0016020: membrane1.27E-05
28GO:0009706: chloroplast inner membrane2.07E-05
29GO:0009523: photosystem II2.72E-05
30GO:0005618: cell wall4.17E-05
31GO:0080085: signal recognition particle, chloroplast targeting7.63E-05
32GO:0000312: plastid small ribosomal subunit2.02E-04
33GO:0033281: TAT protein transport complex2.25E-04
34GO:0005786: signal recognition particle, endoplasmic reticulum targeting3.92E-04
35GO:0042651: thylakoid membrane4.21E-04
36GO:0009295: nucleoid4.38E-04
37GO:0010319: stromule4.38E-04
38GO:0000311: plastid large ribosomal subunit1.12E-03
39GO:0009536: plastid1.18E-03
40GO:0009515: granal stacked thylakoid1.42E-03
41GO:0009782: photosystem I antenna complex1.42E-03
42GO:0043674: columella1.42E-03
43GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex1.42E-03
44GO:0009547: plastid ribosome1.42E-03
45GO:0000428: DNA-directed RNA polymerase complex1.42E-03
46GO:0031361: integral component of thylakoid membrane1.42E-03
47GO:0030529: intracellular ribonucleoprotein complex2.67E-03
48GO:0042170: plastid membrane3.16E-03
49GO:0000427: plastid-encoded plastid RNA polymerase complex3.16E-03
50GO:0046658: anchored component of plasma membrane3.33E-03
51GO:0045298: tubulin complex4.51E-03
52GO:0005782: peroxisomal matrix5.28E-03
53GO:0009509: chromoplast5.28E-03
54GO:0042646: plastid nucleoid7.74E-03
55GO:0032432: actin filament bundle7.74E-03
56GO:0009531: secondary cell wall7.74E-03
57GO:0005960: glycine cleavage complex7.74E-03
58GO:0005775: vacuolar lumen7.74E-03
59GO:0032040: small-subunit processome8.40E-03
60GO:0009508: plastid chromosome9.58E-03
61GO:0030076: light-harvesting complex1.22E-02
62GO:0034707: chloride channel complex1.70E-02
63GO:0031209: SCAR complex1.70E-02
64GO:0015935: small ribosomal subunit1.85E-02
65GO:0005773: vacuole1.96E-02
66GO:0016363: nuclear matrix2.07E-02
67GO:0043231: intracellular membrane-bounded organelle2.13E-02
68GO:0015934: large ribosomal subunit2.13E-02
69GO:0009986: cell surface2.46E-02
70GO:0042807: central vacuole2.46E-02
71GO:0009538: photosystem I reaction center2.87E-02
72GO:0009501: amyloplast2.87E-02
73GO:0031225: anchored component of membrane3.18E-02
74GO:0009522: photosystem I3.29E-02
75GO:0005811: lipid particle3.30E-02
76GO:0005763: mitochondrial small ribosomal subunit3.76E-02
77GO:0042644: chloroplast nucleoid3.76E-02
78GO:0008180: COP9 signalosome3.76E-02
79GO:0016021: integral component of membrane4.33E-02
80GO:0016459: myosin complex4.73E-02
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Gene type



Gene DE type