Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G47710

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010111: glyoxysome organization0.00E+00
2GO:0010477: response to sulfur dioxide0.00E+00
3GO:0046467: membrane lipid biosynthetic process5.64E-05
4GO:0006144: purine nucleobase metabolic process5.64E-05
5GO:0010201: response to continuous far red light stimulus by the high-irradiance response system5.64E-05
6GO:0019628: urate catabolic process5.64E-05
7GO:0000303: response to superoxide5.64E-05
8GO:0006481: C-terminal protein methylation5.64E-05
9GO:0019395: fatty acid oxidation1.37E-04
10GO:0010608: posttranscriptional regulation of gene expression1.37E-04
11GO:1905182: positive regulation of urease activity1.37E-04
12GO:0031408: oxylipin biosynthetic process1.80E-04
13GO:0043617: cellular response to sucrose starvation2.34E-04
14GO:0045836: positive regulation of meiotic nuclear division2.34E-04
15GO:0001676: long-chain fatty acid metabolic process3.41E-04
16GO:1902476: chloride transmembrane transport3.41E-04
17GO:0006809: nitric oxide biosynthetic process3.41E-04
18GO:0006878: cellular copper ion homeostasis4.56E-04
19GO:0015994: chlorophyll metabolic process4.56E-04
20GO:0006656: phosphatidylcholine biosynthetic process5.78E-04
21GO:0043097: pyrimidine nucleoside salvage5.78E-04
22GO:0045927: positive regulation of growth5.78E-04
23GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione7.07E-04
24GO:0006206: pyrimidine nucleobase metabolic process7.07E-04
25GO:0000911: cytokinesis by cell plate formation8.44E-04
26GO:0006821: chloride transport9.85E-04
27GO:0010038: response to metal ion9.85E-04
28GO:0009610: response to symbiotic fungus9.85E-04
29GO:0006102: isocitrate metabolic process1.13E-03
30GO:0009821: alkaloid biosynthetic process1.45E-03
31GO:0010629: negative regulation of gene expression1.79E-03
32GO:0043085: positive regulation of catalytic activity1.97E-03
33GO:0006790: sulfur compound metabolic process2.16E-03
34GO:0012501: programmed cell death2.16E-03
35GO:0006807: nitrogen compound metabolic process2.36E-03
36GO:0055046: microgametogenesis2.36E-03
37GO:0010102: lateral root morphogenesis2.36E-03
38GO:0007034: vacuolar transport2.56E-03
39GO:0009058: biosynthetic process2.72E-03
40GO:0007031: peroxisome organization2.76E-03
41GO:0009825: multidimensional cell growth2.76E-03
42GO:0009790: embryo development3.01E-03
43GO:2000377: regulation of reactive oxygen species metabolic process3.18E-03
44GO:0009695: jasmonic acid biosynthetic process3.40E-03
45GO:0010150: leaf senescence3.55E-03
46GO:0051321: meiotic cell cycle3.63E-03
47GO:0031348: negative regulation of defense response3.86E-03
48GO:0009561: megagametogenesis4.34E-03
49GO:0009789: positive regulation of abscisic acid-activated signaling pathway4.58E-03
50GO:0010197: polar nucleus fusion5.09E-03
51GO:0009646: response to absence of light5.35E-03
52GO:0010193: response to ozone5.88E-03
53GO:0006635: fatty acid beta-oxidation5.88E-03
54GO:0055114: oxidation-reduction process5.92E-03
55GO:0010583: response to cyclopentenone6.15E-03
56GO:0016032: viral process6.15E-03
57GO:0006464: cellular protein modification process6.71E-03
58GO:0006914: autophagy6.71E-03
59GO:0009567: double fertilization forming a zygote and endosperm6.71E-03
60GO:0051607: defense response to virus7.29E-03
61GO:0006979: response to oxidative stress7.53E-03
62GO:0016567: protein ubiquitination7.86E-03
63GO:0009816: defense response to bacterium, incompatible interaction7.89E-03
64GO:0009788: negative regulation of abscisic acid-activated signaling pathway7.89E-03
65GO:0042128: nitrate assimilation8.19E-03
66GO:0009867: jasmonic acid mediated signaling pathway1.08E-02
67GO:0034599: cellular response to oxidative stress1.11E-02
68GO:0006099: tricarboxylic acid cycle1.11E-02
69GO:0006631: fatty acid metabolic process1.22E-02
70GO:0009744: response to sucrose1.29E-02
71GO:0051707: response to other organism1.29E-02
72GO:0000209: protein polyubiquitination1.33E-02
73GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.48E-02
74GO:0009908: flower development1.61E-02
75GO:0051603: proteolysis involved in cellular protein catabolic process1.63E-02
76GO:0048367: shoot system development1.83E-02
77GO:0009737: response to abscisic acid1.95E-02
78GO:0016569: covalent chromatin modification1.96E-02
79GO:0051726: regulation of cell cycle2.13E-02
80GO:0006511: ubiquitin-dependent protein catabolic process2.42E-02
81GO:0040008: regulation of growth2.92E-02
82GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.27E-02
83GO:0006470: protein dephosphorylation3.32E-02
84GO:0045944: positive regulation of transcription from RNA polymerase II promoter3.90E-02
85GO:0006970: response to osmotic stress4.34E-02
86GO:0009723: response to ethylene4.57E-02
87GO:0015031: protein transport4.57E-02
88GO:0048366: leaf development4.62E-02
89GO:0010200: response to chitin4.91E-02
RankGO TermAdjusted P value
1GO:0004846: urate oxidase activity0.00E+00
2GO:0008482: sulfite oxidase activity0.00E+00
3GO:0033550: MAP kinase tyrosine phosphatase activity0.00E+00
4GO:0051213: dioxygenase activity2.34E-05
5GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity5.64E-05
6GO:0004105: choline-phosphate cytidylyltransferase activity5.64E-05
7GO:0004450: isocitrate dehydrogenase (NADP+) activity1.37E-04
8GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding1.37E-04
9GO:0003988: acetyl-CoA C-acyltransferase activity1.37E-04
10GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity2.34E-04
11GO:0016151: nickel cation binding2.34E-04
12GO:0004416: hydroxyacylglutathione hydrolase activity3.41E-04
13GO:0005253: anion channel activity4.56E-04
14GO:0004301: epoxide hydrolase activity4.56E-04
15GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen5.78E-04
16GO:0030151: molybdenum ion binding5.78E-04
17GO:0005247: voltage-gated chloride channel activity7.07E-04
18GO:0004849: uridine kinase activity8.44E-04
19GO:0008113: peptide-methionine (S)-S-oxide reductase activity8.44E-04
20GO:0003950: NAD+ ADP-ribosyltransferase activity8.44E-04
21GO:0004869: cysteine-type endopeptidase inhibitor activity1.13E-03
22GO:0045309: protein phosphorylated amino acid binding1.62E-03
23GO:0019904: protein domain specific binding1.97E-03
24GO:0004725: protein tyrosine phosphatase activity2.97E-03
25GO:0046982: protein heterodimerization activity5.37E-03
26GO:0061630: ubiquitin protein ligase activity7.13E-03
27GO:0046872: metal ion binding8.94E-03
28GO:0003924: GTPase activity1.00E-02
29GO:0016491: oxidoreductase activity1.06E-02
30GO:0008270: zinc ion binding1.06E-02
31GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.08E-02
32GO:0004842: ubiquitin-protein transferase activity1.12E-02
33GO:0004712: protein serine/threonine/tyrosine kinase activity1.15E-02
34GO:0003729: mRNA binding1.24E-02
35GO:0051287: NAD binding1.48E-02
36GO:0031625: ubiquitin protein ligase binding1.71E-02
37GO:0005507: copper ion binding2.54E-02
38GO:0005516: calmodulin binding2.68E-02
39GO:0015144: carbohydrate transmembrane transporter activity2.73E-02
40GO:0005525: GTP binding2.93E-02
41GO:0005351: sugar:proton symporter activity2.97E-02
42GO:0000287: magnesium ion binding4.06E-02
43GO:0004601: peroxidase activity4.12E-02
RankGO TermAdjusted P value
1GO:0031972: chloroplast intermembrane space5.64E-05
2GO:0030139: endocytic vesicle2.34E-04
3GO:0005777: peroxisome6.23E-04
4GO:0034707: chloride channel complex7.07E-04
5GO:0016363: nuclear matrix8.44E-04
6GO:0009514: glyoxysome1.29E-03
7GO:0048471: perinuclear region of cytoplasm1.97E-03
8GO:0016602: CCAAT-binding factor complex2.36E-03
9GO:0030136: clathrin-coated vesicle4.58E-03
10GO:0000786: nucleosome1.04E-02
11GO:0031902: late endosome membrane1.22E-02
12GO:0005635: nuclear envelope1.67E-02
13GO:0005623: cell2.45E-02
14GO:0005783: endoplasmic reticulum2.73E-02
15GO:0005759: mitochondrial matrix2.82E-02
16GO:0009705: plant-type vacuole membrane3.02E-02
17GO:0005622: intracellular3.17E-02
18GO:0005615: extracellular space3.27E-02
19GO:0005774: vacuolar membrane3.57E-02
20GO:0046658: anchored component of plasma membrane3.69E-02
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Gene type



Gene DE type